RNA–Protein interactions for RNA: ENST00000364524.1

RNA5SP140-201, Transcript of RNA, 5S ribosomal pseudogene 140, humanhuman

BASIC

Gene RNA5SP140, Length 92 nt, Biotype rRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNA5SP140-201ENST00000364524 NISCHQ9Y2I1 1504 aa16.16■□□□□ 0.18
RNA5SP140-201ENST00000364524 CCDC180Q9P1Z9 1646 aa14.33□□□□□ -0.12
RNA5SP140-201ENST00000364524 ABCC9O60706 1549 aa14.1□□□□□ -0.15
RNA5SP140-201ENST00000364524 DCAF8L2P0C7V8 631 aa13.63□□□□□ -0.23
RNA5SP140-201ENST00000364524 RB1CC1Q8TDY2 1594 aa13.52□□□□□ -0.25
RNA5SP140-201ENST00000364524 NACADO15069 1562 aa13.5□□□□□ -0.25
RNA5SP140-201ENST00000364524 ZCCHC6Q5VYS8 1495 aaKnown RBP13.42□□□□□ -0.26
RNA5SP140-201ENST00000364524 MYO15BQ96JP2 1530 aa13.39□□□□□ -0.27
RNA5SP140-201ENST00000364524 DCAF1Q9Y4B6 1507 aa13.34□□□□□ -0.27
RNA5SP140-201ENST00000364524 UNC13AQ9UPW8 1703 aa13.27□□□□□ -0.29
RNA5SP140-201ENST00000364524 PABPN1Q86U42 306 aaKnown RBP eCLIP13.24□□□□□ -0.29
RNA5SP140-201ENST00000364524 BICRAQ9NZM4 1560 aa13.14□□□□□ -0.31
RNA5SP140-201ENST00000364524 SCRIBQ14160 1630 aa13.1□□□□□ -0.31
RNA5SP140-201ENST00000364524 DNAJC5BQ9UF47 199 aa13.07□□□□□ -0.32
RNA5SP140-201ENST00000364524 SHROOM4Q9ULL8 1493 aa12.91□□□□□ -0.34
RNA5SP140-201ENST00000364524 EIF4G1Q04637 1599 aaKnown RBP12.77□□□□□ -0.36
RNA5SP140-201ENST00000364524 CC2D2AQ9P2K1 1620 aa12.75□□□□□ -0.37
RNA5SP140-201ENST00000364524 CECR2Q9BXF3 1484 aa12.66□□□□□ -0.38
RNA5SP140-201ENST00000364524 SMARCA4P51532 1647 aa12.52□□□□□ -0.4
RNA5SP140-201ENST00000364524 BAZ1AQ9NRL2 1556 aaPredicted RBP12.5□□□□□ -0.41
RNA5SP140-201ENST00000364524 NCAPD3P42695 1498 aa12.49□□□□□ -0.41
RNA5SP140-201ENST00000364524 ATAD2BQ9ULI0 1458 aa12.48□□□□□ -0.41
RNA5SP140-201ENST00000364524 MROH2BQ7Z745 1585 aa12.47□□□□□ -0.41
RNA5SP140-201ENST00000364524 SMARCA2P51531 1590 aa12.44□□□□□ -0.42
RNA5SP140-201ENST00000364524 PEG3Q9GZU2 1588 aa12.39□□□□□ -0.43
RNA5SP140-201ENST00000364524 HMGXB3Q12766 1538 aa12.37□□□□□ -0.43
RNA5SP140-201ENST00000364524 BAZ1BQ9UIG0 1483 aaKnown RBP12.36□□□□□ -0.43
RNA5SP140-201ENST00000364524 WIZO95785 1651 aa12.34□□□□□ -0.43
RNA5SP140-201ENST00000364524 RSF1Q96T23 1441 aaPredicted RBP12.33□□□□□ -0.44
RNA5SP140-201ENST00000364524 NESP48681 1621 aa12.21□□□□□ -0.46
RNA5SP140-201ENST00000364524 TOP2AP11388 1531 aaKnown RBP12.15□□□□□ -0.46
RNA5SP140-201ENST00000364524 CADPSQ9ULU8 1353 aa12.14□□□□□ -0.47
RNA5SP140-201ENST00000364524 ERCC6Q03468 1493 aa12.13□□□□□ -0.47
RNA5SP140-201ENST00000364524 LAMC3Q9Y6N6 1575 aa12.13□□□□□ -0.47
RNA5SP140-201ENST00000364524 CCDC88BA6NC98 1476 aa12.08□□□□□ -0.48
RNA5SP140-201ENST00000364524 SUPT5HO00267 1087 aaKnown RBP12.07□□□□□ -0.48
RNA5SP140-201ENST00000364524 PDS5BQ9NTI5 1447 aa12.07□□□□□ -0.48
RNA5SP140-201ENST00000364524 KIF21AQ7Z4S6 1674 aa12.04□□□□□ -0.48
RNA5SP140-201ENST00000364524 CFTRP13569 1480 aa12.04□□□□□ -0.48
RNA5SP140-201ENST00000364524 CUX2O14529 1486 aa11.99□□□□□ -0.49
RNA5SP140-201ENST00000364524 FANCD2Q9BXW9 1451 aa11.97□□□□□ -0.49
RNA5SP140-201ENST00000364524 THOC2Q8NI27 1593 aaKnown RBP11.96□□□□□ -0.49
RNA5SP140-201ENST00000364524 CEP164Q9UPV0 1460 aa11.93□□□□□ -0.5
RNA5SP140-201ENST00000364524 PRDM2Q13029 1718 aa11.92□□□□□ -0.5
RNA5SP140-201ENST00000364524 MRC2Q9UBG0 1479 aa11.92□□□□□ -0.5
RNA5SP140-201ENST00000364524 WDR62O43379 1518 aa11.88□□□□□ -0.51
RNA5SP140-201ENST00000364524 URB2Q14146 1524 aaKnown RBP11.86□□□□□ -0.51
RNA5SP140-201ENST00000364524 TOPBP1Q92547 1522 aa11.78□□□□□ -0.52
RNA5SP140-201ENST00000364524 ABCC8Q09428 1581 aa11.78□□□□□ -0.52
RNA5SP140-201ENST00000364524 DNAJC5Q9H3Z4 198 aa11.76□□□□□ -0.53
RNA5SP140-201ENST00000364524 DNMBPQ6XZF7 1577 aa11.74□□□□□ -0.53
RNA5SP140-201ENST00000364524 IFT140Q96RY7 1462 aa11.7□□□□□ -0.54
RNA5SP140-201ENST00000364524 CUX1P39880 1505 aa11.69□□□□□ -0.54
RNA5SP140-201ENST00000364524 ZNF608Q9ULD9 1512 aaPredicted RBP11.67□□□□□ -0.54
RNA5SP140-201ENST00000364524 POLA1P09884 1462 aaPredicted RBP11.67□□□□□ -0.54
RNA5SP140-201ENST00000364524 SOGA1O94964 1423 aa11.67□□□□□ -0.54
RNA5SP140-201ENST00000364524 RAD54L2Q9Y4B4 1467 aa11.66□□□□□ -0.54
RNA5SP140-201ENST00000364524 TARBP1Q13395 1621 aaKnown RBP11.65□□□□□ -0.54
RNA5SP140-201ENST00000364524 AQRO60306 1485 aaKnown RBP eCLIP11.63□□□□□ -0.55
RNA5SP140-201ENST00000364524 FGD5Q6ZNL6 1462 aa11.63□□□□□ -0.55
RNA5SP140-201ENST00000364524 TDRD9Q8NDG6 1382 aaKnown RBP11.62□□□□□ -0.55
RNA5SP140-201ENST00000364524 OSCARQ8IYS5 282 aa11.6□□□□□ -0.55
RNA5SP140-201ENST00000364524 WRNQ14191 1432 aaPredicted RBP eCLIP11.6□□□□□ -0.55
RNA5SP140-201ENST00000364524 EIF4G3O43432 1585 aaKnown RBP11.57□□□□□ -0.56
RNA5SP140-201ENST00000364524 TOP2BQ02880 1626 aa11.57□□□□□ -0.56
RNA5SP140-201ENST00000364524 SYNJ1O43426 1573 aa11.56□□□□□ -0.56
RNA5SP140-201ENST00000364524 BIVM-ERCC5R4GMW8 1640 aa11.56□□□□□ -0.56
RNA5SP140-201ENST00000364524 FBLN2P98095 1184 aa11.53□□□□□ -0.56
RNA5SP140-201ENST00000364524 ABCA10Q8WWZ4 1543 aa11.52□□□□□ -0.57
RNA5SP140-201ENST00000364524 WDR97A6NE52 1622 aa11.52□□□□□ -0.57
RNA5SP140-201ENST00000364524 GAPVD1Q14C86 1478 aa11.51□□□□□ -0.57
RNA5SP140-201ENST00000364524 GRIN2BQ13224 1484 aa11.49□□□□□ -0.57
RNA5SP140-201ENST00000364524 CHMP7Q8WUX9 453 aaPredicted RBP11.48□□□□□ -0.57
RNA5SP140-201ENST00000364524 CHD1O14646 1710 aa11.48□□□□□ -0.57
RNA5SP140-201ENST00000364524 SNAPC4Q5SXM2 1469 aa11.46□□□□□ -0.57
RNA5SP140-201ENST00000364524 PBRM1Q86U86 1689 aa11.46□□□□□ -0.58
RNA5SP140-201ENST00000364524 ABCA5Q8WWZ7 1642 aa11.46□□□□□ -0.58
RNA5SP140-201ENST00000364524 MAGI1Q96QZ7 1491 aaPredicted RBP11.44□□□□□ -0.58
RNA5SP140-201ENST00000364524 SYNJ2O15056 1496 aa11.41□□□□□ -0.58
RNA5SP140-201ENST00000364524 TRIM41Q8WV44 630 aa11.39□□□□□ -0.59
RNA5SP140-201ENST00000364524 IGF1RP08069 1367 aa11.38□□□□□ -0.59
RNA5SP140-201ENST00000364524 ERICH3Q5RHP9 1530 aa11.37□□□□□ -0.59
RNA5SP140-201ENST00000364524 FHAD1B1AJZ9 1412 aa11.36□□□□□ -0.59
RNA5SP140-201ENST00000364524 KIF27Q86VH2 1401 aa11.36□□□□□ -0.59
RNA5SP140-201ENST00000364524 RIMBP3CA6NJZ7 1639 aa11.34□□□□□ -0.59
RNA5SP140-201ENST00000364524 RIMBP3BA6NNM3 1639 aa11.34□□□□□ -0.59
RNA5SP140-201ENST00000364524 RIMBP3Q9UFD9 1639 aa11.34□□□□□ -0.59
RNA5SP140-201ENST00000364524 ADAMTS12P58397 1594 aa11.33□□□□□ -0.6
RNA5SP140-201ENST00000364524 GRIN2AQ12879 1464 aa11.33□□□□□ -0.6
RNA5SP140-201ENST00000364524 ARHGEF11O15085 1522 aa11.32□□□□□ -0.6
RNA5SP140-201ENST00000364524 CLASP1Q7Z460 1538 aa11.32□□□□□ -0.6
RNA5SP140-201ENST00000364524 CYB5RLQ6IPT4 315 aa11.32□□□□□ -0.6
RNA5SP140-201ENST00000364524 RUSC2Q8N2Y8 1516 aa11.3□□□□□ -0.6
RNA5SP140-201ENST00000364524 CARMIL1Q5VZK9 1371 aa11.28□□□□□ -0.6
RNA5SP140-201ENST00000364524 NUP160Q12769 1436 aa11.28□□□□□ -0.6
RNA5SP140-201ENST00000364524 CEP170Q5SW79 1584 aa11.28□□□□□ -0.6
RNA5SP140-201ENST00000364524 JPH4Q96JJ6 628 aa11.26□□□□□ -0.61
RNA5SP140-201ENST00000364524 CUL7Q14999 1698 aa11.25□□□□□ -0.61
RNA5SP140-201ENST00000364524 CHIC1Q5VXU3 224 aa11.25□□□□□ -0.61
RNA5SP140-201ENST00000364524 ARAP1Q96P48 1450 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms