RNA–Protein interactions for RNA: ENST00000363904.1

RNU6-478P-201, Transcript of RNA, U6 small nuclear 478, pseudogene, humanhuman

BASIC

Gene RNU6-478P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-478P-201ENST00000363904 AEBP2Q6ZN18 517 aaPredicted RBP10.58□□□□□ -0.72
RNU6-478P-201ENST00000363904 CHIC1Q5VXU3 224 aa10□□□□□ -0.81
RNU6-478P-201ENST00000363904 POTEDQ86YR6 584 aa9.41□□□□□ -0.9
RNU6-478P-201ENST00000363904 SENP3Q9H4L4 574 aaPredicted RBP9.24□□□□□ -0.93
RNU6-478P-201ENST00000363904 PHF23Q9BUL5 403 aaPredicted RBP8.99□□□□□ -0.97
RNU6-478P-201ENST00000363904 FOXD1Q16676 465 aa8.64□□□□□ -1.03
RNU6-478P-201ENST00000363904 MSH5O43196 834 aa8.43□□□□□ -1.06
RNU6-478P-201ENST00000363904 PIAS4Q8N2W9 510 aaPredicted RBP7.97□□□□□ -1.13
RNU6-478P-201ENST00000363904 CACNB1Q02641 598 aaPredicted RBP7.71□□□□□ -1.18
RNU6-478P-201ENST00000363904 PPP6R1Q9UPN7 881 aa7.5□□□□□ -1.21
RNU6-478P-201ENST00000363904 ADRA2BP18089 450 aa7.48□□□□□ -1.21
RNU6-478P-201ENST00000363904 POTEHQ6S545 545 aa7.26□□□□□ -1.25
RNU6-478P-201ENST00000363904 PLPPR3Q6T4P5 718 aa7.23□□□□□ -1.25
RNU6-478P-201ENST00000363904 DMRT2Q9Y5R5 561 aa7.18□□□□□ -1.26
RNU6-478P-201ENST00000363904 MAPK8IP2Q13387 824 aaPredicted RBP7.07□□□□□ -1.28
RNU6-478P-201ENST00000363904 RNF39Q9H2S5 420 aa7.07□□□□□ -1.28
RNU6-478P-201ENST00000363904 DCAF8L1A6NGE4 600 aa7.05□□□□□ -1.28
RNU6-478P-201ENST00000363904 C1QBPQ07021 282 aaKnown RBP6.97□□□□□ -1.29
RNU6-478P-201ENST00000363904 SCAF1Q9H7N4 1312 aaKnown RBP6.93□□□□□ -1.3
RNU6-478P-201ENST00000363904 HOXD11P31277 338 aaPredicted RBP6.61□□□□□ -1.35
RNU6-478P-201ENST00000363904 DNAJC5BQ9UF47 199 aa6.52□□□□□ -1.37
RNU6-478P-201ENST00000363904 SP7Q8TDD2 431 aaPredicted RBP6.47□□□□□ -1.37
RNU6-478P-201ENST00000363904 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.41□□□□□ -1.38
RNU6-478P-201ENST00000363904 RNF216Q9NWF9 866 aaPredicted RBP6.4□□□□□ -1.38
RNU6-478P-201ENST00000363904 DSG3P32926 999 aa6.39□□□□□ -1.39
RNU6-478P-201ENST00000363904 PLSCR2Q9NRY7 297 aa6.37□□□□□ -1.39
RNU6-478P-201ENST00000363904 CAPN15O75808 1086 aa6.34□□□□□ -1.39
RNU6-478P-201ENST00000363904 CHRDL2Q6WN34 429 aa6.31□□□□□ -1.4
RNU6-478P-201ENST00000363904 CNKSR2Q8WXI2 1034 aa6.29□□□□□ -1.4
RNU6-478P-201ENST00000363904 SPINK5Q9NQ38 1064 aaPredicted RBP6.24□□□□□ -1.41
RNU6-478P-201ENST00000363904 PPP4R3CPQ6ZMV5 832 aa6.23□□□□□ -1.41
RNU6-478P-201ENST00000363904 RBM42Q9BTD8 480 aaKnown RBP6.19□□□□□ -1.42
RNU6-478P-201ENST00000363904 HAX1O00165 279 aa6.14□□□□□ -1.43
RNU6-478P-201ENST00000363904 U3KPZ7 1027 aaPredicted RBP6.1□□□□□ -1.43
RNU6-478P-201ENST00000363904 ABCB7O75027 752 aa6.09□□□□□ -1.43
RNU6-478P-201ENST00000363904 LHX8Q68G74 356 aa6.07□□□□□ -1.44
RNU6-478P-201ENST00000363904 TRHP20396 242 aaPredicted RBP6.06□□□□□ -1.44
RNU6-478P-201ENST00000363904 ZNF219Q9P2Y4 722 aaPredicted RBP6.01□□□□□ -1.45
RNU6-478P-201ENST00000363904 PIP4P2Q8N4L2 257 aa5.98□□□□□ -1.45
RNU6-478P-201ENST00000363904 APLP2Q06481 763 aa5.97□□□□□ -1.45
RNU6-478P-201ENST00000363904 EVX2Q03828 476 aa5.89□□□□□ -1.47
RNU6-478P-201ENST00000363904 AKT1S1Q96B36 256 aa5.86□□□□□ -1.47
RNU6-478P-201ENST00000363904 NCBP3Q53F19 620 aaKnown RBP5.84□□□□□ -1.47
RNU6-478P-201ENST00000363904 FXR2P51116 673 aaKnown RBP eCLIP5.8□□□□□ -1.48
RNU6-478P-201ENST00000363904 REM2Q8IYK8 340 aaPredicted RBP5.8□□□□□ -1.48
RNU6-478P-201ENST00000363904 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.77□□□□□ -1.49
RNU6-478P-201ENST00000363904 GABBR2O75899 941 aa5.77□□□□□ -1.49
RNU6-478P-201ENST00000363904 HNRNPUL2Q1KMD3 747 aaKnown RBP5.77□□□□□ -1.49
RNU6-478P-201ENST00000363904 POTEMA6NI47 508 aa5.76□□□□□ -1.49
RNU6-478P-201ENST00000363904 PITPNM1O00562 1244 aa5.73□□□□□ -1.49
RNU6-478P-201ENST00000363904 POTEGQ6S5H5 508 aa5.72□□□□□ -1.49
RNU6-478P-201ENST00000363904 PCDH10Q9P2E7 1040 aa5.72□□□□□ -1.49
RNU6-478P-201ENST00000363904 POLA2Q14181 598 aa5.7□□□□□ -1.5
RNU6-478P-201ENST00000363904 SAMD1Q6SPF0 538 aaPredicted RBP5.68□□□□□ -1.5
RNU6-478P-201ENST00000363904 NPM3O75607 178 aaKnown RBP5.67□□□□□ -1.5
RNU6-478P-201ENST00000363904 C19orf67A6NJJ6 358 aa5.65□□□□□ -1.5
RNU6-478P-201ENST00000363904 PRKAR2AP13861 404 aaKnown RBP5.62□□□□□ -1.51
RNU6-478P-201ENST00000363904 POTEIP0CG38 1075 aa5.58□□□□□ -1.52
RNU6-478P-201ENST00000363904 SLC4A2P04920 1241 aa5.56□□□□□ -1.52
RNU6-478P-201ENST00000363904 ZBTB12Q9Y330 459 aaPredicted RBP5.56□□□□□ -1.52
RNU6-478P-201ENST00000363904 OSCARQ8IYS5 282 aa5.54□□□□□ -1.52
RNU6-478P-201ENST00000363904 OTUD5Q96G74 571 aa5.54□□□□□ -1.52
RNU6-478P-201ENST00000363904 DCBLD2Q96PD2 775 aa5.54□□□□□ -1.52
RNU6-478P-201ENST00000363904 CLCN6P51797 869 aa5.47□□□□□ -1.53
RNU6-478P-201ENST00000363904 CLEC11AQ9Y240 323 aa5.47□□□□□ -1.53
RNU6-478P-201ENST00000363904 SPDYE1Q8NFV5 336 aaPredicted RBP5.41□□□□□ -1.54
RNU6-478P-201ENST00000363904 FAM163AQ96GL9 167 aaPredicted RBP5.41□□□□□ -1.54
RNU6-478P-201ENST00000363904 CD44P16070 742 aaKnown RBP5.4□□□□□ -1.54
RNU6-478P-201ENST00000363904 POTEB2H3BUK9 544 aa5.38□□□□□ -1.55
RNU6-478P-201ENST00000363904 CHADLQ6NUI6 762 aa5.38□□□□□ -1.55
RNU6-478P-201ENST00000363904 CDAN1Q8IWY9 1227 aa5.35□□□□□ -1.55
RNU6-478P-201ENST00000363904 LCE2DQ5TA82 110 aaPredicted RBP5.32□□□□□ -1.56
RNU6-478P-201ENST00000363904 MAMSTRQ6ZN01 415 aa5.31□□□□□ -1.56
RNU6-478P-201ENST00000363904 SPDYE2BA6NHP3 402 aa5.3□□□□□ -1.56
RNU6-478P-201ENST00000363904 MYCNP04198 464 aaPredicted RBP5.3□□□□□ -1.56
RNU6-478P-201ENST00000363904 SPDYE6P0CI01 402 aa5.3□□□□□ -1.56
RNU6-478P-201ENST00000363904 SPDYE2Q495Y8 402 aa5.3□□□□□ -1.56
RNU6-478P-201ENST00000363904 MMRN1Q13201 1228 aa5.28□□□□□ -1.56
RNU6-478P-201ENST00000363904 PRR29P0C7W0 189 aa5.26□□□□□ -1.57
RNU6-478P-201ENST00000363904 ZNF579Q8NAF0 562 aaKnown RBP5.24□□□□□ -1.57
RNU6-478P-201ENST00000363904 SCUBE2Q9NQ36 999 aa5.24□□□□□ -1.57
RNU6-478P-201ENST00000363904 GALR2O43603 387 aaPredicted RBP5.23□□□□□ -1.57
RNU6-478P-201ENST00000363904 ZRANB1Q9UGI0 708 aa5.22□□□□□ -1.57
RNU6-478P-201ENST00000363904 FARP1Q9Y4F1 1045 aaPredicted RBP5.22□□□□□ -1.57
RNU6-478P-201ENST00000363904 SPNS2Q8IVW8 549 aa5.21□□□□□ -1.58
RNU6-478P-201ENST00000363904 METRNQ9UJH8 293 aa5.2□□□□□ -1.58
RNU6-478P-201ENST00000363904 POTEJP0CG39 1038 aa5.17□□□□□ -1.58
RNU6-478P-201ENST00000363904 C7P10643 843 aa5.16□□□□□ -1.58
RNU6-478P-201ENST00000363904 PELP1Q8IZL8 1130 aaKnown RBP5.16□□□□□ -1.58
RNU6-478P-201ENST00000363904 SLC39A7Q92504 469 aa5.16□□□□□ -1.58
RNU6-478P-201ENST00000363904 ATF5Q9Y2D1 282 aaPredicted RBP5.16□□□□□ -1.58
RNU6-478P-201ENST00000363904 ZNF692Q9BU19 519 aaPredicted RBP5.15□□□□□ -1.59
RNU6-478P-201ENST00000363904 FBLN2P98095 1184 aa5.14□□□□□ -1.59
RNU6-478P-201ENST00000363904 SSUH2Q9Y2M2 353 aa5.09□□□□□ -1.59
RNU6-478P-201ENST00000363904 PAK3O75914 559 aaPredicted RBP5.08□□□□□ -1.6
RNU6-478P-201ENST00000363904 ST18O60284 1047 aa5.05□□□□□ -1.6
RNU6-478P-201ENST00000363904 ASTLQ6HA08 431 aaPredicted RBP5.05□□□□□ -1.6
RNU6-478P-201ENST00000363904 PHF12Q96QT6 1004 aa5.05□□□□□ -1.6
RNU6-478P-201ENST00000363904 ATMINO43313 823 aaPredicted RBP5.04□□□□□ -1.6
RNU6-478P-201ENST00000363904 PABPN1Q86U42 306 aaKnown RBP eCLIP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms