RNA–Protein interactions for RNA: ENST00000363433.1

RNU6-940P-201, Transcript of RNA, U6 small nuclear 940, pseudogene, humanhuman

BASIC

Gene RNU6-940P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-940P-201ENST00000363433 AEBP2Q6ZN18 517 aaPredicted RBP8.59□□□□□ -1.03
RNU6-940P-201ENST00000363433 POTEDQ86YR6 584 aa8.36□□□□□ -1.07
RNU6-940P-201ENST00000363433 CHIC1Q5VXU3 224 aa7.84□□□□□ -1.15
RNU6-940P-201ENST00000363433 SENP3Q9H4L4 574 aaPredicted RBP7.33□□□□□ -1.24
RNU6-940P-201ENST00000363433 PHF23Q9BUL5 403 aaPredicted RBP7.16□□□□□ -1.26
RNU6-940P-201ENST00000363433 FOXD1Q16676 465 aa7.05□□□□□ -1.28
RNU6-940P-201ENST00000363433 MSH5O43196 834 aa6.84□□□□□ -1.31
RNU6-940P-201ENST00000363433 CACNB1Q02641 598 aaPredicted RBP6.44□□□□□ -1.38
RNU6-940P-201ENST00000363433 POTEHQ6S545 545 aa6.32□□□□□ -1.4
RNU6-940P-201ENST00000363433 PIAS4Q8N2W9 510 aaPredicted RBP6.29□□□□□ -1.4
RNU6-940P-201ENST00000363433 PPP6R1Q9UPN7 881 aa5.92□□□□□ -1.46
RNU6-940P-201ENST00000363433 RNF39Q9H2S5 420 aa5.82□□□□□ -1.48
RNU6-940P-201ENST00000363433 ADRA2BP18089 450 aa5.8□□□□□ -1.48
RNU6-940P-201ENST00000363433 DMRT2Q9Y5R5 561 aa5.72□□□□□ -1.49
RNU6-940P-201ENST00000363433 MAPK8IP2Q13387 824 aaPredicted RBP5.63□□□□□ -1.51
RNU6-940P-201ENST00000363433 C1QBPQ07021 282 aaKnown RBP5.62□□□□□ -1.51
RNU6-940P-201ENST00000363433 PLSCR2Q9NRY7 297 aa5.57□□□□□ -1.52
RNU6-940P-201ENST00000363433 SP7Q8TDD2 431 aaPredicted RBP5.48□□□□□ -1.53
RNU6-940P-201ENST00000363433 DCAF8L1A6NGE4 600 aa5.46□□□□□ -1.54
RNU6-940P-201ENST00000363433 PLPPR3Q6T4P5 718 aa5.25□□□□□ -1.57
RNU6-940P-201ENST00000363433 HOXD11P31277 338 aaPredicted RBP5.16□□□□□ -1.58
RNU6-940P-201ENST00000363433 CHRDL2Q6WN34 429 aa5.16□□□□□ -1.58
RNU6-940P-201ENST00000363433 SCAF1Q9H7N4 1312 aaKnown RBP5.16□□□□□ -1.58
RNU6-940P-201ENST00000363433 DSG3P32926 999 aa5.14□□□□□ -1.59
RNU6-940P-201ENST00000363433 LHX8Q68G74 356 aa5.13□□□□□ -1.59
RNU6-940P-201ENST00000363433 DNAJC5BQ9UF47 199 aa5.11□□□□□ -1.59
RNU6-940P-201ENST00000363433 EVX2Q03828 476 aa4.98□□□□□ -1.61
RNU6-940P-201ENST00000363433 HAX1O00165 279 aa4.97□□□□□ -1.61
RNU6-940P-201ENST00000363433 SPINK5Q9NQ38 1064 aaPredicted RBP4.94□□□□□ -1.62
RNU6-940P-201ENST00000363433 POTEMA6NI47 508 aa4.89□□□□□ -1.63
RNU6-940P-201ENST00000363433 CAPN15O75808 1086 aa4.88□□□□□ -1.63
RNU6-940P-201ENST00000363433 PIP4P2Q8N4L2 257 aa4.85□□□□□ -1.63
RNU6-940P-201ENST00000363433 POTEGQ6S5H5 508 aa4.83□□□□□ -1.64
RNU6-940P-201ENST00000363433 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.82□□□□□ -1.64
RNU6-940P-201ENST00000363433 RBM42Q9BTD8 480 aaKnown RBP4.82□□□□□ -1.64
RNU6-940P-201ENST00000363433 RNF216Q9NWF9 866 aaPredicted RBP4.82□□□□□ -1.64
RNU6-940P-201ENST00000363433 PCDH10Q9P2E7 1040 aa4.78□□□□□ -1.64
RNU6-940P-201ENST00000363433 ABCB7O75027 752 aa4.73□□□□□ -1.65
RNU6-940P-201ENST00000363433 GABBR2O75899 941 aa4.72□□□□□ -1.65
RNU6-940P-201ENST00000363433 U3KPZ7 1027 aaPredicted RBP4.71□□□□□ -1.66
RNU6-940P-201ENST00000363433 POTEIP0CG38 1075 aa4.69□□□□□ -1.66
RNU6-940P-201ENST00000363433 FXR2P51116 673 aaKnown RBP eCLIP4.68□□□□□ -1.66
RNU6-940P-201ENST00000363433 OTUD5Q96G74 571 aa4.65□□□□□ -1.67
RNU6-940P-201ENST00000363433 CNKSR2Q8WXI2 1034 aa4.62□□□□□ -1.67
RNU6-940P-201ENST00000363433 TRHP20396 242 aaPredicted RBP4.59□□□□□ -1.67
RNU6-940P-201ENST00000363433 LCE2DQ5TA82 110 aaPredicted RBP4.58□□□□□ -1.68
RNU6-940P-201ENST00000363433 C19orf67A6NJJ6 358 aa4.56□□□□□ -1.68
RNU6-940P-201ENST00000363433 REM2Q8IYK8 340 aaPredicted RBP4.56□□□□□ -1.68
RNU6-940P-201ENST00000363433 AKT1S1Q96B36 256 aa4.55□□□□□ -1.68
RNU6-940P-201ENST00000363433 PITPNM1O00562 1244 aa4.53□□□□□ -1.68
RNU6-940P-201ENST00000363433 POTEB2H3BUK9 544 aa4.52□□□□□ -1.69
RNU6-940P-201ENST00000363433 PPP4R3CPQ6ZMV5 832 aa4.52□□□□□ -1.69
RNU6-940P-201ENST00000363433 ZNF219Q9P2Y4 722 aaPredicted RBP4.5□□□□□ -1.69
RNU6-940P-201ENST00000363433 MMRN1Q13201 1228 aa4.44□□□□□ -1.7
RNU6-940P-201ENST00000363433 CDAN1Q8IWY9 1227 aa4.43□□□□□ -1.7
RNU6-940P-201ENST00000363433 FAM163AQ96GL9 167 aaPredicted RBP4.38□□□□□ -1.71
RNU6-940P-201ENST00000363433 PRKAR2AP13861 404 aaKnown RBP4.37□□□□□ -1.71
RNU6-940P-201ENST00000363433 SPNS2Q8IVW8 549 aa4.35□□□□□ -1.71
RNU6-940P-201ENST00000363433 POTEJP0CG39 1038 aa4.32□□□□□ -1.72
RNU6-940P-201ENST00000363433 DCBLD2Q96PD2 775 aa4.32□□□□□ -1.72
RNU6-940P-201ENST00000363433 APLP2Q06481 763 aa4.3□□□□□ -1.72
RNU6-940P-201ENST00000363433 POLA2Q14181 598 aa4.29□□□□□ -1.72
RNU6-940P-201ENST00000363433 CLCN6P51797 869 aa4.22□□□□□ -1.73
RNU6-940P-201ENST00000363433 OSCARQ8IYS5 282 aa4.19□□□□□ -1.74
RNU6-940P-201ENST00000363433 PELP1Q8IZL8 1130 aaKnown RBP4.18□□□□□ -1.74
RNU6-940P-201ENST00000363433 CD44P16070 742 aaKnown RBP4.17□□□□□ -1.74
RNU6-940P-201ENST00000363433 CHADLQ6NUI6 762 aa4.16□□□□□ -1.74
RNU6-940P-201ENST00000363433 SLC4A2P04920 1241 aa4.14□□□□□ -1.75
RNU6-940P-201ENST00000363433 GALR2O43603 387 aaPredicted RBP4.13□□□□□ -1.75
RNU6-940P-201ENST00000363433 MAMSTRQ6ZN01 415 aa4.13□□□□□ -1.75
RNU6-940P-201ENST00000363433 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP4.1□□□□□ -1.75
RNU6-940P-201ENST00000363433 HNRNPUL2Q1KMD3 747 aaKnown RBP4.1□□□□□ -1.75
RNU6-940P-201ENST00000363433 ST18O60284 1047 aa4.09□□□□□ -1.75
RNU6-940P-201ENST00000363433 SAMD1Q6SPF0 538 aaPredicted RBP4.08□□□□□ -1.76
RNU6-940P-201ENST00000363433 ZNF579Q8NAF0 562 aaKnown RBP4.08□□□□□ -1.76
RNU6-940P-201ENST00000363433 CLEC11AQ9Y240 323 aa4.08□□□□□ -1.76
RNU6-940P-201ENST00000363433 SCUBE2Q9NQ36 999 aa4.07□□□□□ -1.76
RNU6-940P-201ENST00000363433 METRNQ9UJH8 293 aa4.07□□□□□ -1.76
RNU6-940P-201ENST00000363433 NPM3O75607 178 aaKnown RBP4.03□□□□□ -1.76
RNU6-940P-201ENST00000363433 SPDYE1Q8NFV5 336 aaPredicted RBP4.01□□□□□ -1.77
RNU6-940P-201ENST00000363433 ZBTB12Q9Y330 459 aaPredicted RBP4.01□□□□□ -1.77
RNU6-940P-201ENST00000363433 C7P10643 843 aa4□□□□□ -1.77
RNU6-940P-201ENST00000363433 SLC39A7Q92504 469 aa3.98□□□□□ -1.77
RNU6-940P-201ENST00000363433 KRTAP3-3Q9BYR6 98 aa3.98□□□□□ -1.77
RNU6-940P-201ENST00000363433 KRTAP3-2Q9BYR7 98 aa3.98□□□□□ -1.77
RNU6-940P-201ENST00000363433 POTEFA5A3E0 1075 aa3.97□□□□□ -1.77
RNU6-940P-201ENST00000363433 ZRANB1Q9UGI0 708 aa3.97□□□□□ -1.77
RNU6-940P-201ENST00000363433 FARP1Q9Y4F1 1045 aaPredicted RBP3.97□□□□□ -1.77
RNU6-940P-201ENST00000363433 NCBP3Q53F19 620 aaKnown RBP3.96□□□□□ -1.78
RNU6-940P-201ENST00000363433 ASTLQ6HA08 431 aaPredicted RBP3.96□□□□□ -1.78
RNU6-940P-201ENST00000363433 ATMINO43313 823 aaPredicted RBP3.93□□□□□ -1.78
RNU6-940P-201ENST00000363433 MARVELD3Q96A59 401 aa3.91□□□□□ -1.78
RNU6-940P-201ENST00000363433 LOC100996750A0A140TA64 210 aa3.9□□□□□ -1.79
RNU6-940P-201ENST00000363433 KRTAP4-6Q9BYQ5 205 aa3.9□□□□□ -1.79
RNU6-940P-201ENST00000363433 POTEB3A0JP26 581 aa3.89□□□□□ -1.79
RNU6-940P-201ENST00000363433 POTEBQ6S5H4 581 aa3.89□□□□□ -1.79
RNU6-940P-201ENST00000363433 TMEM121BQ9BXQ6 578 aaPredicted RBP3.88□□□□□ -1.79
RNU6-940P-201ENST00000363433 PHF12Q96QT6 1004 aa3.87□□□□□ -1.79
RNU6-940P-201ENST00000363433 SPDYE2BA6NHP3 402 aa3.86□□□□□ -1.79
RNU6-940P-201ENST00000363433 PRR29P0C7W0 189 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms