RNA–Protein interactions for RNA: ENST00000362456.1

RNU6-1298P-201, Transcript of RNA, U6 small nuclear 1298, pseudogene, humanhuman

BASIC

Gene RNU6-1298P, Length 101 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1298P-201ENST00000362456 AEBP2Q6ZN18 517 aaPredicted RBP18.32■□□□□ 0.52
RNU6-1298P-201ENST00000362456 CHIC1Q5VXU3 224 aa17.24■□□□□ 0.35
RNU6-1298P-201ENST00000362456 POTEDQ86YR6 584 aa16■□□□□ 0.15
RNU6-1298P-201ENST00000362456 SENP3Q9H4L4 574 aaPredicted RBP15.91■□□□□ 0.14
RNU6-1298P-201ENST00000362456 PHF23Q9BUL5 403 aaPredicted RBP15.52■□□□□ 0.08
RNU6-1298P-201ENST00000362456 FOXD1Q16676 465 aa14.92□□□□□ -0.02
RNU6-1298P-201ENST00000362456 MSH5O43196 834 aa14.46□□□□□ -0.09
RNU6-1298P-201ENST00000362456 PIAS4Q8N2W9 510 aaPredicted RBP13.76□□□□□ -0.21
RNU6-1298P-201ENST00000362456 CACNB1Q02641 598 aaPredicted RBP13.18□□□□□ -0.3
RNU6-1298P-201ENST00000362456 PPP6R1Q9UPN7 881 aa13.05□□□□□ -0.32
RNU6-1298P-201ENST00000362456 ADRA2BP18089 450 aa13.01□□□□□ -0.33
RNU6-1298P-201ENST00000362456 PLPPR3Q6T4P5 718 aa12.61□□□□□ -0.39
RNU6-1298P-201ENST00000362456 DMRT2Q9Y5R5 561 aa12.39□□□□□ -0.43
RNU6-1298P-201ENST00000362456 POTEHQ6S545 545 aa12.36□□□□□ -0.43
RNU6-1298P-201ENST00000362456 MAPK8IP2Q13387 824 aaPredicted RBP12.28□□□□□ -0.44
RNU6-1298P-201ENST00000362456 RNF39Q9H2S5 420 aa12.17□□□□□ -0.46
RNU6-1298P-201ENST00000362456 DCAF8L1A6NGE4 600 aa12.15□□□□□ -0.46
RNU6-1298P-201ENST00000362456 SCAF1Q9H7N4 1312 aaKnown RBP11.99□□□□□ -0.49
RNU6-1298P-201ENST00000362456 C1QBPQ07021 282 aaKnown RBP11.97□□□□□ -0.49
RNU6-1298P-201ENST00000362456 HOXD11P31277 338 aaPredicted RBP11.46□□□□□ -0.57
RNU6-1298P-201ENST00000362456 DNAJC5BQ9UF47 199 aa11.25□□□□□ -0.61
RNU6-1298P-201ENST00000362456 RNF216Q9NWF9 866 aaPredicted RBP11.11□□□□□ -0.63
RNU6-1298P-201ENST00000362456 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.09□□□□□ -0.63
RNU6-1298P-201ENST00000362456 SP7Q8TDD2 431 aaPredicted RBP11.04□□□□□ -0.64
RNU6-1298P-201ENST00000362456 DSG3P32926 999 aa11.03□□□□□ -0.64
RNU6-1298P-201ENST00000362456 CAPN15O75808 1086 aa10.96□□□□□ -0.65
RNU6-1298P-201ENST00000362456 CNKSR2Q8WXI2 1034 aa10.95□□□□□ -0.66
RNU6-1298P-201ENST00000362456 PPP4R3CPQ6ZMV5 832 aa10.9□□□□□ -0.66
RNU6-1298P-201ENST00000362456 CHRDL2Q6WN34 429 aa10.83□□□□□ -0.68
RNU6-1298P-201ENST00000362456 SPINK5Q9NQ38 1064 aaPredicted RBP10.82□□□□□ -0.68
RNU6-1298P-201ENST00000362456 PLSCR2Q9NRY7 297 aa10.81□□□□□ -0.68
RNU6-1298P-201ENST00000362456 RBM42Q9BTD8 480 aaKnown RBP10.64□□□□□ -0.71
RNU6-1298P-201ENST00000362456 U3KPZ7 1027 aaPredicted RBP10.59□□□□□ -0.71
RNU6-1298P-201ENST00000362456 ABCB7O75027 752 aa10.58□□□□□ -0.72
RNU6-1298P-201ENST00000362456 HAX1O00165 279 aa10.53□□□□□ -0.72
RNU6-1298P-201ENST00000362456 TRHP20396 242 aaPredicted RBP10.51□□□□□ -0.73
RNU6-1298P-201ENST00000362456 ZNF219Q9P2Y4 722 aaPredicted RBP10.39□□□□□ -0.75
RNU6-1298P-201ENST00000362456 LHX8Q68G74 356 aa10.37□□□□□ -0.75
RNU6-1298P-201ENST00000362456 APLP2Q06481 763 aa10.32□□□□□ -0.76
RNU6-1298P-201ENST00000362456 PIP4P2Q8N4L2 257 aa10.3□□□□□ -0.76
RNU6-1298P-201ENST00000362456 NCBP3Q53F19 620 aaKnown RBP10.2□□□□□ -0.78
RNU6-1298P-201ENST00000362456 EVX2Q03828 476 aa10.17□□□□□ -0.78
RNU6-1298P-201ENST00000362456 AKT1S1Q96B36 256 aa10.11□□□□□ -0.79
RNU6-1298P-201ENST00000362456 REM2Q8IYK8 340 aaPredicted RBP10.01□□□□□ -0.81
RNU6-1298P-201ENST00000362456 FXR2P51116 673 aaKnown RBP eCLIP10□□□□□ -0.81
RNU6-1298P-201ENST00000362456 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.99□□□□□ -0.81
RNU6-1298P-201ENST00000362456 HNRNPUL2Q1KMD3 747 aaKnown RBP9.99□□□□□ -0.81
RNU6-1298P-201ENST00000362456 NPM3O75607 178 aaKnown RBP9.95□□□□□ -0.82
RNU6-1298P-201ENST00000362456 GABBR2O75899 941 aa9.93□□□□□ -0.82
RNU6-1298P-201ENST00000362456 PITPNM1O00562 1244 aa9.92□□□□□ -0.82
RNU6-1298P-201ENST00000362456 POLA2Q14181 598 aa9.91□□□□□ -0.82
RNU6-1298P-201ENST00000362456 SAMD1Q6SPF0 538 aaPredicted RBP9.86□□□□□ -0.83
RNU6-1298P-201ENST00000362456 POTEMA6NI47 508 aa9.84□□□□□ -0.83
RNU6-1298P-201ENST00000362456 POTEGQ6S5H5 508 aa9.77□□□□□ -0.85
RNU6-1298P-201ENST00000362456 SLC4A2P04920 1241 aa9.76□□□□□ -0.85
RNU6-1298P-201ENST00000362456 C19orf67A6NJJ6 358 aa9.75□□□□□ -0.85
RNU6-1298P-201ENST00000362456 PCDH10Q9P2E7 1040 aa9.71□□□□□ -0.86
RNU6-1298P-201ENST00000362456 PRKAR2AP13861 404 aaKnown RBP9.7□□□□□ -0.86
RNU6-1298P-201ENST00000362456 POTEIP0CG38 1075 aa9.64□□□□□ -0.87
RNU6-1298P-201ENST00000362456 ZBTB12Q9Y330 459 aaPredicted RBP9.63□□□□□ -0.87
RNU6-1298P-201ENST00000362456 OSCARQ8IYS5 282 aa9.62□□□□□ -0.87
RNU6-1298P-201ENST00000362456 OTUD5Q96G74 571 aa9.53□□□□□ -0.88
RNU6-1298P-201ENST00000362456 DCBLD2Q96PD2 775 aa9.52□□□□□ -0.89
RNU6-1298P-201ENST00000362456 CLEC11AQ9Y240 323 aa9.48□□□□□ -0.89
RNU6-1298P-201ENST00000362456 CLCN6P51797 869 aa9.38□□□□□ -0.91
RNU6-1298P-201ENST00000362456 SPDYE1Q8NFV5 336 aaPredicted RBP9.36□□□□□ -0.91
RNU6-1298P-201ENST00000362456 CHADLQ6NUI6 762 aa9.35□□□□□ -0.91
RNU6-1298P-201ENST00000362456 CD44P16070 742 aaKnown RBP9.33□□□□□ -0.92
RNU6-1298P-201ENST00000362456 POTEB2H3BUK9 544 aa9.3□□□□□ -0.92
RNU6-1298P-201ENST00000362456 MYCNP04198 464 aaPredicted RBP9.28□□□□□ -0.92
RNU6-1298P-201ENST00000362456 FAM163AQ96GL9 167 aaPredicted RBP9.28□□□□□ -0.92
RNU6-1298P-201ENST00000362456 SPDYE2BA6NHP3 402 aa9.2□□□□□ -0.94
RNU6-1298P-201ENST00000362456 SPDYE6P0CI01 402 aa9.2□□□□□ -0.94
RNU6-1298P-201ENST00000362456 SPDYE2Q495Y8 402 aa9.2□□□□□ -0.94
RNU6-1298P-201ENST00000362456 LCE2DQ5TA82 110 aaPredicted RBP9.17□□□□□ -0.94
RNU6-1298P-201ENST00000362456 CDAN1Q8IWY9 1227 aa9.17□□□□□ -0.94
RNU6-1298P-201ENST00000362456 PRR29P0C7W0 189 aa9.12□□□□□ -0.95
RNU6-1298P-201ENST00000362456 MAMSTRQ6ZN01 415 aa9.1□□□□□ -0.95
RNU6-1298P-201ENST00000362456 ATF5Q9Y2D1 282 aaPredicted RBP9.09□□□□□ -0.95
RNU6-1298P-201ENST00000362456 ZNF579Q8NAF0 562 aaKnown RBP9.06□□□□□ -0.96
RNU6-1298P-201ENST00000362456 FARP1Q9Y4F1 1045 aaPredicted RBP9.06□□□□□ -0.96
RNU6-1298P-201ENST00000362456 GALR2O43603 387 aaPredicted RBP9.05□□□□□ -0.96
RNU6-1298P-201ENST00000362456 MMRN1Q13201 1228 aa9.04□□□□□ -0.96
RNU6-1298P-201ENST00000362456 ZRANB1Q9UGI0 708 aa9.04□□□□□ -0.96
RNU6-1298P-201ENST00000362456 SCUBE2Q9NQ36 999 aa9.01□□□□□ -0.97
RNU6-1298P-201ENST00000362456 ZNF692Q9BU19 519 aaPredicted RBP8.97□□□□□ -0.97
RNU6-1298P-201ENST00000362456 METRNQ9UJH8 293 aa8.97□□□□□ -0.97
RNU6-1298P-201ENST00000362456 POTEJP0CG39 1038 aa8.96□□□□□ -0.98
RNU6-1298P-201ENST00000362456 FBLN2P98095 1184 aa8.95□□□□□ -0.98
RNU6-1298P-201ENST00000362456 PELP1Q8IZL8 1130 aaKnown RBP8.94□□□□□ -0.98
RNU6-1298P-201ENST00000362456 SPNS2Q8IVW8 549 aa8.92□□□□□ -0.98
RNU6-1298P-201ENST00000362456 C7P10643 843 aa8.89□□□□□ -0.99
RNU6-1298P-201ENST00000362456 SLC39A7Q92504 469 aa8.89□□□□□ -0.99
RNU6-1298P-201ENST00000362456 SSUH2Q9Y2M2 353 aa8.89□□□□□ -0.99
RNU6-1298P-201ENST00000362456 PAK3O75914 559 aaPredicted RBP8.79□□□□□ -1
RNU6-1298P-201ENST00000362456 PABPN1Q86U42 306 aaKnown RBP eCLIP8.78□□□□□ -1
RNU6-1298P-201ENST00000362456 PHF12Q96QT6 1004 aa8.78□□□□□ -1
RNU6-1298P-201ENST00000362456 KCNA4P22459 653 aa8.77□□□□□ -1.01
RNU6-1298P-201ENST00000362456 ASTLQ6HA08 431 aaPredicted RBP8.75□□□□□ -1.01
RNU6-1298P-201ENST00000362456 ATMINO43313 823 aaPredicted RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms