RNA–Protein interactions for RNA: ENST00000362025.9

RAB3IP-202, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 2,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-202ENST00000362025 NISCHQ9Y2I1 1504 aa42.11■■■■■ 4.33
RAB3IP-202ENST00000362025 CCDC180Q9P1Z9 1646 aa37.65■■■■□ 3.62
RAB3IP-202ENST00000362025 ABCC9O60706 1549 aa37.62■■■■□ 3.61
RAB3IP-202ENST00000362025 RB1CC1Q8TDY2 1594 aa35.8■■■■□ 3.32
RAB3IP-202ENST00000362025 NACADO15069 1562 aa35.6■■■■□ 3.29
RAB3IP-202ENST00000362025 DCAF8L2P0C7V8 631 aa35.58■■■■□ 3.29
RAB3IP-202ENST00000362025 DNAJC5BQ9UF47 199 aa35.18■■■■□ 3.22
RAB3IP-202ENST00000362025 MYO15BQ96JP2 1530 aa35.14■■■■□ 3.22
RAB3IP-202ENST00000362025 PABPN1Q86U42 306 aaKnown RBP eCLIP35.09■■■■□ 3.21
RAB3IP-202ENST00000362025 UNC13AQ9UPW8 1703 aa34.94■■■■□ 3.18
RAB3IP-202ENST00000362025 ZCCHC6Q5VYS8 1495 aaKnown RBP34.93■■■■□ 3.18
RAB3IP-202ENST00000362025 BICRAQ9NZM4 1560 aa34.77■■■■□ 3.16
RAB3IP-202ENST00000362025 DCAF1Q9Y4B6 1507 aa34.75■■■■□ 3.15
RAB3IP-202ENST00000362025 SCRIBQ14160 1630 aa34.4■■■■□ 3.1
RAB3IP-202ENST00000362025 SHROOM4Q9ULL8 1493 aa34.27■■■■□ 3.08
RAB3IP-202ENST00000362025 CC2D2AQ9P2K1 1620 aa33.94■■■■□ 3.02
RAB3IP-202ENST00000362025 EIF4G1Q04637 1599 aaKnown RBP33.9■■■■□ 3.02
RAB3IP-202ENST00000362025 CECR2Q9BXF3 1484 aa33.86■■■■□ 3.01
RAB3IP-202ENST00000362025 NCAPD3P42695 1498 aa32.89■■■□□ 2.86
RAB3IP-202ENST00000362025 ATAD2BQ9ULI0 1458 aa32.82■■■□□ 2.85
RAB3IP-202ENST00000362025 SMARCA4P51532 1647 aa32.8■■■□□ 2.84
RAB3IP-202ENST00000362025 SMARCA2P51531 1590 aa32.71■■■□□ 2.83
RAB3IP-202ENST00000362025 BAZ1AQ9NRL2 1556 aaPredicted RBP32.66■■■□□ 2.82
RAB3IP-202ENST00000362025 HMGXB3Q12766 1538 aa32.63■■■□□ 2.81
RAB3IP-202ENST00000362025 BAZ1BQ9UIG0 1483 aaKnown RBP32.51■■■□□ 2.8
RAB3IP-202ENST00000362025 MROH2BQ7Z745 1585 aa32.47■■■□□ 2.79
RAB3IP-202ENST00000362025 PEG3Q9GZU2 1588 aa32.46■■■□□ 2.79
RAB3IP-202ENST00000362025 ERCC6Q03468 1493 aa32.45■■■□□ 2.79
RAB3IP-202ENST00000362025 NESP48681 1621 aa32.36■■■□□ 2.77
RAB3IP-202ENST00000362025 CUX2O14529 1486 aa32.3■■■□□ 2.76
RAB3IP-202ENST00000362025 DNAJC5Q9H3Z4 198 aa32.16■■■□□ 2.74
RAB3IP-202ENST00000362025 LAMC3Q9Y6N6 1575 aa32.08■■■□□ 2.73
RAB3IP-202ENST00000362025 WIZO95785 1651 aa32.07■■■□□ 2.72
RAB3IP-202ENST00000362025 PDS5BQ9NTI5 1447 aa31.94■■■□□ 2.7
RAB3IP-202ENST00000362025 THOC2Q8NI27 1593 aaKnown RBP31.93■■■□□ 2.7
RAB3IP-202ENST00000362025 CADPSQ9ULU8 1353 aa31.92■■■□□ 2.7
RAB3IP-202ENST00000362025 KIF21AQ7Z4S6 1674 aa31.88■■■□□ 2.69
RAB3IP-202ENST00000362025 RSF1Q96T23 1441 aaPredicted RBP31.87■■■□□ 2.69
RAB3IP-202ENST00000362025 TOP2AP11388 1531 aaKnown RBP31.67■■■□□ 2.66
RAB3IP-202ENST00000362025 MRC2Q9UBG0 1479 aa31.66■■■□□ 2.66
RAB3IP-202ENST00000362025 CFTRP13569 1480 aa31.57■■■□□ 2.64
RAB3IP-202ENST00000362025 CEP164Q9UPV0 1460 aa31.56■■■□□ 2.64
RAB3IP-202ENST00000362025 FANCD2Q9BXW9 1451 aa31.55■■■□□ 2.64
RAB3IP-202ENST00000362025 WDR62O43379 1518 aa31.55■■■□□ 2.64
RAB3IP-202ENST00000362025 CCDC88BA6NC98 1476 aa31.34■■■□□ 2.61
RAB3IP-202ENST00000362025 URB2Q14146 1524 aaKnown RBP31.29■■■□□ 2.6
RAB3IP-202ENST00000362025 PRDM2Q13029 1718 aa31.16■■■□□ 2.58
RAB3IP-202ENST00000362025 TOPBP1Q92547 1522 aa30.97■■■□□ 2.55
RAB3IP-202ENST00000362025 IFT140Q96RY7 1462 aa30.92■■■□□ 2.54
RAB3IP-202ENST00000362025 OSCARQ8IYS5 282 aa30.91■■■□□ 2.54
RAB3IP-202ENST00000362025 ZNF608Q9ULD9 1512 aaPredicted RBP30.89■■■□□ 2.54
RAB3IP-202ENST00000362025 ABCC8Q09428 1581 aa30.87■■■□□ 2.53
RAB3IP-202ENST00000362025 TRIM41Q8WV44 630 aa30.86■■■□□ 2.53
RAB3IP-202ENST00000362025 DNMBPQ6XZF7 1577 aa30.84■■■□□ 2.53
RAB3IP-202ENST00000362025 EIF4G3O43432 1585 aaKnown RBP30.68■■■□□ 2.5
RAB3IP-202ENST00000362025 POLA1P09884 1462 aaPredicted RBP30.66■■■□□ 2.5
RAB3IP-202ENST00000362025 TARBP1Q13395 1621 aaKnown RBP30.65■■■□□ 2.5
RAB3IP-202ENST00000362025 SUPT5HO00267 1087 aaKnown RBP30.64■■■□□ 2.5
RAB3IP-202ENST00000362025 AQRO60306 1485 aaKnown RBP eCLIP30.64■■■□□ 2.49
RAB3IP-202ENST00000362025 RAD54L2Q9Y4B4 1467 aa30.58■■■□□ 2.49
RAB3IP-202ENST00000362025 SOGA1O94964 1423 aa30.55■■■□□ 2.48
RAB3IP-202ENST00000362025 FGD5Q6ZNL6 1462 aa30.5■■■□□ 2.47
RAB3IP-202ENST00000362025 CUX1P39880 1505 aa30.49■■■□□ 2.47
RAB3IP-202ENST00000362025 TDRD9Q8NDG6 1382 aaKnown RBP30.49■■■□□ 2.47
RAB3IP-202ENST00000362025 RIMBP3CA6NJZ7 1639 aa30.44■■■□□ 2.46
RAB3IP-202ENST00000362025 RIMBP3BA6NNM3 1639 aa30.44■■■□□ 2.46
RAB3IP-202ENST00000362025 RIMBP3Q9UFD9 1639 aa30.44■■■□□ 2.46
RAB3IP-202ENST00000362025 FBLN2P98095 1184 aa30.43■■■□□ 2.46
RAB3IP-202ENST00000362025 CHD1O14646 1710 aa30.4■■■□□ 2.46
RAB3IP-202ENST00000362025 ARHGEF11O15085 1522 aa30.38■■■□□ 2.45
RAB3IP-202ENST00000362025 SNAPC4Q5SXM2 1469 aa30.31■■■□□ 2.44
RAB3IP-202ENST00000362025 WDR97A6NE52 1622 aa30.3■■■□□ 2.44
RAB3IP-202ENST00000362025 GRIN2BQ13224 1484 aa30.24■■■□□ 2.43
RAB3IP-202ENST00000362025 CHMP7Q8WUX9 453 aaPredicted RBP30.22■■■□□ 2.43
RAB3IP-202ENST00000362025 MAGI1Q96QZ7 1491 aaPredicted RBP30.21■■■□□ 2.43
RAB3IP-202ENST00000362025 CYB5RLQ6IPT4 315 aa30.2■■■□□ 2.43
RAB3IP-202ENST00000362025 GAPVD1Q14C86 1478 aa30.16■■■□□ 2.42
RAB3IP-202ENST00000362025 ABCA10Q8WWZ4 1543 aa30.15■■■□□ 2.42
RAB3IP-202ENST00000362025 SYNJ2O15056 1496 aa30.12■■■□□ 2.41
RAB3IP-202ENST00000362025 ARAP1Q96P48 1450 aa30.11■■■□□ 2.41
RAB3IP-202ENST00000362025 CLASP1Q7Z460 1538 aa30.08■■■□□ 2.41
RAB3IP-202ENST00000362025 PBRM1Q86U86 1689 aa30.07■■■□□ 2.4
RAB3IP-202ENST00000362025 WRNQ14191 1432 aaPredicted RBP eCLIP30.07■■■□□ 2.4
RAB3IP-202ENST00000362025 SYNJ1O43426 1573 aa30.07■■■□□ 2.4
RAB3IP-202ENST00000362025 ABCA5Q8WWZ7 1642 aa30.06■■■□□ 2.4
RAB3IP-202ENST00000362025 TOP2BQ02880 1626 aa30.01■■■□□ 2.39
RAB3IP-202ENST00000362025 BIVM-ERCC5R4GMW8 1640 aa29.99■■■□□ 2.39
RAB3IP-202ENST00000362025 GRIN2AQ12879 1464 aa29.85■■■□□ 2.37
RAB3IP-202ENST00000362025 ADAMTS12P58397 1594 aa29.84■■■□□ 2.37
RAB3IP-202ENST00000362025 TRHP20396 242 aaPredicted RBP29.82■■■□□ 2.36
RAB3IP-202ENST00000362025 FHAD1B1AJZ9 1412 aa29.78■■■□□ 2.36
RAB3IP-202ENST00000362025 ERICH3Q5RHP9 1530 aa29.75■■■□□ 2.35
RAB3IP-202ENST00000362025 NUP160Q12769 1436 aa29.74■■■□□ 2.35
RAB3IP-202ENST00000362025 CEP170Q5SW79 1584 aa29.73■■■□□ 2.35
RAB3IP-202ENST00000362025 ERCC6L2Q5T890 1561 aa29.66■■■□□ 2.34
RAB3IP-202ENST00000362025 SHROOM2Q13796 1616 aa29.55■■■□□ 2.32
RAB3IP-202ENST00000362025 JPH4Q96JJ6 628 aa29.48■■■□□ 2.31
RAB3IP-202ENST00000362025 KIF27Q86VH2 1401 aa29.47■■■□□ 2.31
RAB3IP-202ENST00000362025 PRG4Q92954 1404 aaPredicted RBP29.47■■■□□ 2.31
RAB3IP-202ENST00000362025 IGF1RP08069 1367 aa29.46■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms