RNA–Protein interactions for RNA: ENST00000360708.9

ZC3HC1-203, Transcript of zinc finger C3HC-type containing 1, humanhuman

TSL 2 BASIC

Gene ZC3HC1, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1-203ENST00000360708 NISCHQ9Y2I1 1504 aa29.15■■■□□ 2.26
ZC3HC1-203ENST00000360708 CCDC180Q9P1Z9 1646 aa25.63■■□□□ 1.69
ZC3HC1-203ENST00000360708 ZCCHC6Q5VYS8 1495 aaKnown RBP24.52■■□□□ 1.52
ZC3HC1-203ENST00000360708 DCAF1Q9Y4B6 1507 aa24.15■■□□□ 1.46
ZC3HC1-203ENST00000360708 ABCC9O60706 1549 aa24.04■■□□□ 1.44
ZC3HC1-203ENST00000360708 MYO15BQ96JP2 1530 aa23.87■■□□□ 1.41
ZC3HC1-203ENST00000360708 DCAF8L2P0C7V8 631 aa23.83■■□□□ 1.4
ZC3HC1-203ENST00000360708 NACADO15069 1562 aa23.74■■□□□ 1.39
ZC3HC1-203ENST00000360708 SHROOM4Q9ULL8 1493 aa23.62■■□□□ 1.37
ZC3HC1-203ENST00000360708 RB1CC1Q8TDY2 1594 aa23.56■■□□□ 1.36
ZC3HC1-203ENST00000360708 SCRIBQ14160 1630 aa23.45■■□□□ 1.35
ZC3HC1-203ENST00000360708 UNC13AQ9UPW8 1703 aa23.3■■□□□ 1.32
ZC3HC1-203ENST00000360708 BICRAQ9NZM4 1560 aa22.88■■□□□ 1.25
ZC3HC1-203ENST00000360708 SUPT5HO00267 1087 aaKnown RBP22.63■■□□□ 1.21
ZC3HC1-203ENST00000360708 CECR2Q9BXF3 1484 aa22.6■■□□□ 1.21
ZC3HC1-203ENST00000360708 BAZ1AQ9NRL2 1556 aaPredicted RBP22.54■■□□□ 1.2
ZC3HC1-203ENST00000360708 PABPN1Q86U42 306 aaKnown RBP eCLIP22.53■■□□□ 1.2
ZC3HC1-203ENST00000360708 RSF1Q96T23 1441 aaPredicted RBP22.53■■□□□ 1.2
ZC3HC1-203ENST00000360708 MROH2BQ7Z745 1585 aa22.52■■□□□ 1.2
ZC3HC1-203ENST00000360708 SMARCA4P51532 1647 aa22.5■■□□□ 1.19
ZC3HC1-203ENST00000360708 WIZO95785 1651 aa22.41■■□□□ 1.18
ZC3HC1-203ENST00000360708 PEG3Q9GZU2 1588 aa22.22■■□□□ 1.15
ZC3HC1-203ENST00000360708 TOP2AP11388 1531 aaKnown RBP22.16■■□□□ 1.14
ZC3HC1-203ENST00000360708 EIF4G1Q04637 1599 aaKnown RBP22.16■■□□□ 1.14
ZC3HC1-203ENST00000360708 SMARCA2P51531 1590 aa22.08■■□□□ 1.12
ZC3HC1-203ENST00000360708 ATAD2BQ9ULI0 1458 aa22.02■■□□□ 1.12
ZC3HC1-203ENST00000360708 BAZ1BQ9UIG0 1483 aaKnown RBP21.92■■□□□ 1.1
ZC3HC1-203ENST00000360708 HMGXB3Q12766 1538 aa21.91■■□□□ 1.1
ZC3HC1-203ENST00000360708 CC2D2AQ9P2K1 1620 aa21.86■■□□□ 1.09
ZC3HC1-203ENST00000360708 CCDC88BA6NC98 1476 aa21.83■■□□□ 1.08
ZC3HC1-203ENST00000360708 NCAPD3P42695 1498 aa21.82■■□□□ 1.08
ZC3HC1-203ENST00000360708 CHIC1Q5VXU3 224 aa21.67■■□□□ 1.06
ZC3HC1-203ENST00000360708 PRDM2Q13029 1718 aa21.57■■□□□ 1.04
ZC3HC1-203ENST00000360708 ABCC8Q09428 1581 aa21.43■■□□□ 1.02
ZC3HC1-203ENST00000360708 CFTRP13569 1480 aa21.34■■□□□ 1.01
ZC3HC1-203ENST00000360708 TRIM41Q8WV44 630 aa21.28■■□□□ 1
ZC3HC1-203ENST00000360708 SYNJ1O43426 1573 aa21.25■□□□□ 0.99
ZC3HC1-203ENST00000360708 BIVM-ERCC5R4GMW8 1640 aa21.22■□□□□ 0.99
ZC3HC1-203ENST00000360708 WRNQ14191 1432 aaPredicted RBP eCLIP21.22■□□□□ 0.99
ZC3HC1-203ENST00000360708 CADPSQ9ULU8 1353 aa21.21■□□□□ 0.99
ZC3HC1-203ENST00000360708 LAMC3Q9Y6N6 1575 aa21.2■□□□□ 0.98
ZC3HC1-203ENST00000360708 TOP2BQ02880 1626 aa21.17■□□□□ 0.98
ZC3HC1-203ENST00000360708 NESP48681 1621 aa21.12■□□□□ 0.97
ZC3HC1-203ENST00000360708 DNAJC5BQ9UF47 199 aa21.1■□□□□ 0.97
ZC3HC1-203ENST00000360708 CUX1P39880 1505 aa21.08■□□□□ 0.96
ZC3HC1-203ENST00000360708 KIF21AQ7Z4S6 1674 aa21.05■□□□□ 0.96
ZC3HC1-203ENST00000360708 FANCD2Q9BXW9 1451 aa21.05■□□□□ 0.96
ZC3HC1-203ENST00000360708 CEP164Q9UPV0 1460 aa20.95■□□□□ 0.94
ZC3HC1-203ENST00000360708 DNMBPQ6XZF7 1577 aa20.94■□□□□ 0.94
ZC3HC1-203ENST00000360708 SOGA1O94964 1423 aa20.91■□□□□ 0.94
ZC3HC1-203ENST00000360708 EEA1Q15075 1411 aa20.91■□□□□ 0.94
ZC3HC1-203ENST00000360708 PDS5BQ9NTI5 1447 aa20.9■□□□□ 0.94
ZC3HC1-203ENST00000360708 FAM9AQ8IZU1 332 aaPredicted RBP20.89■□□□□ 0.93
ZC3HC1-203ENST00000360708 RUSC2Q8N2Y8 1516 aa20.87■□□□□ 0.93
ZC3HC1-203ENST00000360708 TOPBP1Q92547 1522 aa20.85■□□□□ 0.93
ZC3HC1-203ENST00000360708 FGD5Q6ZNL6 1462 aa20.83■□□□□ 0.93
ZC3HC1-203ENST00000360708 URB2Q14146 1524 aaKnown RBP20.82■□□□□ 0.92
ZC3HC1-203ENST00000360708 LOC105371045A0A1W2PR82 267 aa20.8■□□□□ 0.92
ZC3HC1-203ENST00000360708 WDR97A6NE52 1622 aa20.78■□□□□ 0.92
ZC3HC1-203ENST00000360708 KIF21BO75037 1637 aa20.77■□□□□ 0.91
ZC3HC1-203ENST00000360708 POLA1P09884 1462 aaPredicted RBP20.73■□□□□ 0.91
ZC3HC1-203ENST00000360708 MRC2Q9UBG0 1479 aa20.71■□□□□ 0.91
ZC3HC1-203ENST00000360708 THOC2Q8NI27 1593 aaKnown RBP20.67■□□□□ 0.9
ZC3HC1-203ENST00000360708 KIF27Q86VH2 1401 aa20.67■□□□□ 0.9
ZC3HC1-203ENST00000360708 CSRNP3Q8WYN3 585 aa20.67■□□□□ 0.9
ZC3HC1-203ENST00000360708 WDR62O43379 1518 aa20.66■□□□□ 0.9
ZC3HC1-203ENST00000360708 CUX2O14529 1486 aa20.65■□□□□ 0.9
ZC3HC1-203ENST00000360708 ABCA10Q8WWZ4 1543 aa20.65■□□□□ 0.9
ZC3HC1-203ENST00000360708 GOLGA3Q08378 1498 aa20.64■□□□□ 0.89
ZC3HC1-203ENST00000360708 RAD54L2Q9Y4B4 1467 aa20.62■□□□□ 0.89
ZC3HC1-203ENST00000360708 TARBP1Q13395 1621 aaKnown RBP20.62■□□□□ 0.89
ZC3HC1-203ENST00000360708 ERCC6Q03468 1493 aa20.61■□□□□ 0.89
ZC3HC1-203ENST00000360708 ERICH3Q5RHP9 1530 aa20.59■□□□□ 0.89
ZC3HC1-203ENST00000360708 ABCA5Q8WWZ7 1642 aa20.59■□□□□ 0.89
ZC3HC1-203ENST00000360708 EHMT2Q96KQ7 1210 aa20.58■□□□□ 0.88
ZC3HC1-203ENST00000360708 PRXQ9BXM0 1461 aa20.55■□□□□ 0.88
ZC3HC1-203ENST00000360708 RAPGEF2Q9Y4G8 1499 aa20.53■□□□□ 0.88
ZC3HC1-203ENST00000360708 PBRM1Q86U86 1689 aa20.53■□□□□ 0.88
ZC3HC1-203ENST00000360708 CUL7Q14999 1698 aa20.52■□□□□ 0.88
ZC3HC1-203ENST00000360708 TNIKQ9UKE5 1360 aa20.5■□□□□ 0.87
ZC3HC1-203ENST00000360708 IGF1RP08069 1367 aa20.43■□□□□ 0.86
ZC3HC1-203ENST00000360708 IFT140Q96RY7 1462 aa20.43■□□□□ 0.86
ZC3HC1-203ENST00000360708 CEP162Q5TB80 1403 aa20.43■□□□□ 0.86
ZC3HC1-203ENST00000360708 GAPVD1Q14C86 1478 aa20.41■□□□□ 0.86
ZC3HC1-203ENST00000360708 CTTNBP2Q8WZ74 1663 aa20.38■□□□□ 0.85
ZC3HC1-203ENST00000360708 EIF4G3O43432 1585 aaKnown RBP20.38■□□□□ 0.85
ZC3HC1-203ENST00000360708 UBTFP17480 764 aaKnown RBP20.38■□□□□ 0.85
ZC3HC1-203ENST00000360708 TDRD9Q8NDG6 1382 aaKnown RBP20.36■□□□□ 0.85
ZC3HC1-203ENST00000360708 CARMIL1Q5VZK9 1371 aa20.34■□□□□ 0.85
ZC3HC1-203ENST00000360708 ADAMTS12P58397 1594 aa20.32■□□□□ 0.84
ZC3HC1-203ENST00000360708 ZNF608Q9ULD9 1512 aaPredicted RBP20.31■□□□□ 0.84
ZC3HC1-203ENST00000360708 AQRO60306 1485 aaKnown RBP eCLIP20.27■□□□□ 0.833e-6■■■□□ 16.9
ZC3HC1-203ENST00000360708 GRIN2BQ13224 1484 aa20.26■□□□□ 0.83
ZC3HC1-203ENST00000360708 CLIP1P30622 1438 aa20.26■□□□□ 0.83
ZC3HC1-203ENST00000360708 FHAD1B1AJZ9 1412 aa20.17■□□□□ 0.82
ZC3HC1-203ENST00000360708 SNAPC4Q5SXM2 1469 aa20.16■□□□□ 0.82
ZC3HC1-203ENST00000360708 ARAP1Q96P48 1450 aa20.13■□□□□ 0.81
ZC3HC1-203ENST00000360708 MAGI1Q96QZ7 1491 aaPredicted RBP20.13■□□□□ 0.81
ZC3HC1-203ENST00000360708 ARHGAP35Q9NRY4 1499 aa20.11■□□□□ 0.81
ZC3HC1-203ENST00000360708 VPS8Q8N3P4 1428 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms