RNA–Protein interactions for RNA: ENST00000359597.8

TP53-202, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 1,152 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-202ENST00000359597 NISCHQ9Y2I1 1504 aa27.59■■■□□ 2.01
TP53-202ENST00000359597 CCDC180Q9P1Z9 1646 aa24.46■■□□□ 1.51
TP53-202ENST00000359597 ABCC9O60706 1549 aa23.5■■□□□ 1.35
TP53-202ENST00000359597 ZCCHC6Q5VYS8 1495 aaKnown RBP23.06■■□□□ 1.28
TP53-202ENST00000359597 NACADO15069 1562 aa22.89■■□□□ 1.26
TP53-202ENST00000359597 DCAF1Q9Y4B6 1507 aa22.89■■□□□ 1.26
TP53-202ENST00000359597 MYO15BQ96JP2 1530 aa22.87■■□□□ 1.25
TP53-202ENST00000359597 DCAF8L2P0C7V8 631 aa22.87■■□□□ 1.25
TP53-202ENST00000359597 RB1CC1Q8TDY2 1594 aa22.84■■□□□ 1.25
TP53-202ENST00000359597 UNC13AQ9UPW8 1703 aa22.27■■□□□ 1.16
TP53-202ENST00000359597 SCRIBQ14160 1630 aa22.27■■□□□ 1.16
TP53-202ENST00000359597 BICRAQ9NZM4 1560 aa22.04■■□□□ 1.12
TP53-202ENST00000359597 SHROOM4Q9ULL8 1493 aa21.99■■□□□ 1.11
TP53-202ENST00000359597 PABPN1Q86U42 306 aaKnown RBP eCLIP21.97■■□□□ 1.11
TP53-202ENST00000359597 EIF4G1Q04637 1599 aaKnown RBP21.48■■□□□ 1.03
TP53-202ENST00000359597 BAZ1AQ9NRL2 1556 aaPredicted RBP21.41■■□□□ 1.02
TP53-202ENST00000359597 CECR2Q9BXF3 1484 aa21.39■■□□□ 1.01
TP53-202ENST00000359597 SMARCA4P51532 1647 aa21.35■■□□□ 1.01
TP53-202ENST00000359597 CC2D2AQ9P2K1 1620 aa21.3■■□□□ 1
TP53-202ENST00000359597 MROH2BQ7Z745 1585 aa21.23■□□□□ 0.99
TP53-202ENST00000359597 SMARCA2P51531 1590 aa21.19■□□□□ 0.98
TP53-202ENST00000359597 PEG3Q9GZU2 1588 aa21.15■□□□□ 0.98
TP53-202ENST00000359597 DNAJC5BQ9UF47 199 aa21.14■□□□□ 0.97
TP53-202ENST00000359597 ATAD2BQ9ULI0 1458 aa21.12■□□□□ 0.97
TP53-202ENST00000359597 RSF1Q96T23 1441 aaPredicted RBP21.12■□□□□ 0.97
TP53-202ENST00000359597 NCAPD3P42695 1498 aa21.07■□□□□ 0.96
TP53-202ENST00000359597 HMGXB3Q12766 1538 aa21.05■□□□□ 0.96
TP53-202ENST00000359597 WIZO95785 1651 aa21.03■□□□□ 0.96
TP53-202ENST00000359597 BAZ1BQ9UIG0 1483 aaKnown RBP21.01■□□□□ 0.95
TP53-202ENST00000359597 TOP2AP11388 1531 aaKnown RBP20.88■□□□□ 0.93
TP53-202ENST00000359597 SUPT5HO00267 1087 aaKnown RBP20.82■□□□□ 0.92
TP53-202ENST00000359597 CCDC88BA6NC98 1476 aa20.57■□□□□ 0.88
TP53-202ENST00000359597 LAMC3Q9Y6N6 1575 aa20.51■□□□□ 0.87
TP53-202ENST00000359597 CADPSQ9ULU8 1353 aa20.47■□□□□ 0.87
TP53-202ENST00000359597 CFTRP13569 1480 aa20.43■□□□□ 0.86
TP53-202ENST00000359597 NESP48681 1621 aa20.41■□□□□ 0.86
TP53-202ENST00000359597 PRDM2Q13029 1718 aa20.38■□□□□ 0.85
TP53-202ENST00000359597 PDS5BQ9NTI5 1447 aa20.36■□□□□ 0.85
TP53-202ENST00000359597 ERCC6Q03468 1493 aa20.3■□□□□ 0.84
TP53-202ENST00000359597 FANCD2Q9BXW9 1451 aa20.25■□□□□ 0.83
TP53-202ENST00000359597 KIF21AQ7Z4S6 1674 aa20.23■□□□□ 0.83
TP53-202ENST00000359597 CEP164Q9UPV0 1460 aa20.23■□□□□ 0.83
TP53-202ENST00000359597 MRC2Q9UBG0 1479 aa20.11■□□□□ 0.81
TP53-202ENST00000359597 THOC2Q8NI27 1593 aaKnown RBP20.08■□□□□ 0.81
TP53-202ENST00000359597 ABCC8Q09428 1581 aa20.05■□□□□ 0.8
TP53-202ENST00000359597 WDR62O43379 1518 aa20.03■□□□□ 0.8
TP53-202ENST00000359597 DNMBPQ6XZF7 1577 aa20■□□□□ 0.79
TP53-202ENST00000359597 URB2Q14146 1524 aaKnown RBP19.99■□□□□ 0.79
TP53-202ENST00000359597 CUX2O14529 1486 aa19.97■□□□□ 0.79
TP53-202ENST00000359597 TOPBP1Q92547 1522 aa19.96■□□□□ 0.79
TP53-202ENST00000359597 WRNQ14191 1432 aaPredicted RBP eCLIP19.95■□□□□ 0.78
TP53-202ENST00000359597 CUX1P39880 1505 aa19.92■□□□□ 0.78
TP53-202ENST00000359597 TOP2BQ02880 1626 aa19.88■□□□□ 0.77
TP53-202ENST00000359597 BIVM-ERCC5R4GMW8 1640 aa19.87■□□□□ 0.77
TP53-202ENST00000359597 SYNJ1O43426 1573 aa19.85■□□□□ 0.77
TP53-202ENST00000359597 FGD5Q6ZNL6 1462 aa19.81■□□□□ 0.76
TP53-202ENST00000359597 POLA1P09884 1462 aaPredicted RBP19.8■□□□□ 0.76
TP53-202ENST00000359597 IFT140Q96RY7 1462 aa19.78■□□□□ 0.76
TP53-202ENST00000359597 SOGA1O94964 1423 aa19.73■□□□□ 0.75
TP53-202ENST00000359597 TARBP1Q13395 1621 aaKnown RBP19.71■□□□□ 0.75
TP53-202ENST00000359597 TRIM41Q8WV44 630 aa19.7■□□□□ 0.74
TP53-202ENST00000359597 RAD54L2Q9Y4B4 1467 aa19.67■□□□□ 0.74
TP53-202ENST00000359597 WDR97A6NE52 1622 aa19.67■□□□□ 0.74
TP53-202ENST00000359597 ABCA10Q8WWZ4 1543 aa19.66■□□□□ 0.74
TP53-202ENST00000359597 CHIC1Q5VXU3 224 aa19.62■□□□□ 0.73
TP53-202ENST00000359597 EIF4G3O43432 1585 aaKnown RBP19.59■□□□□ 0.73
TP53-202ENST00000359597 ZNF608Q9ULD9 1512 aaPredicted RBP19.58■□□□□ 0.73
TP53-202ENST00000359597 TDRD9Q8NDG6 1382 aaKnown RBP19.55■□□□□ 0.72
TP53-202ENST00000359597 ABCA5Q8WWZ7 1642 aa19.54■□□□□ 0.72
TP53-202ENST00000359597 GAPVD1Q14C86 1478 aa19.53■□□□□ 0.72
TP53-202ENST00000359597 KIF27Q86VH2 1401 aa19.52■□□□□ 0.72
TP53-202ENST00000359597 AQRO60306 1485 aaKnown RBP eCLIP19.52■□□□□ 0.728e-7■■■□□ 16.1
TP53-202ENST00000359597 GRIN2BQ13224 1484 aa19.49■□□□□ 0.71
TP53-202ENST00000359597 PBRM1Q86U86 1689 aa19.49■□□□□ 0.71
TP53-202ENST00000359597 ERICH3Q5RHP9 1530 aa19.45■□□□□ 0.7
TP53-202ENST00000359597 MAGI1Q96QZ7 1491 aaPredicted RBP19.42■□□□□ 0.7
TP53-202ENST00000359597 EEA1Q15075 1411 aa19.42■□□□□ 0.7
TP53-202ENST00000359597 SNAPC4Q5SXM2 1469 aa19.4■□□□□ 0.7
TP53-202ENST00000359597 CUL7Q14999 1698 aa19.37■□□□□ 0.69
TP53-202ENST00000359597 ADAMTS12P58397 1594 aa19.35■□□□□ 0.69
TP53-202ENST00000359597 RUSC2Q8N2Y8 1516 aa19.33■□□□□ 0.68
TP53-202ENST00000359597 SYNJ2O15056 1496 aa19.33■□□□□ 0.68
TP53-202ENST00000359597 FHAD1B1AJZ9 1412 aa19.33■□□□□ 0.68
TP53-202ENST00000359597 IGF1RP08069 1367 aa19.32■□□□□ 0.68
TP53-202ENST00000359597 CHD1O14646 1710 aa19.28■□□□□ 0.68
TP53-202ENST00000359597 CHMP7Q8WUX9 453 aaPredicted RBP19.27■□□□□ 0.68
TP53-202ENST00000359597 CSRNP3Q8WYN3 585 aa19.26■□□□□ 0.67
TP53-202ENST00000359597 CARMIL1Q5VZK9 1371 aa19.25■□□□□ 0.67
TP53-202ENST00000359597 FBLN2P98095 1184 aa19.25■□□□□ 0.67
TP53-202ENST00000359597 GRIN2AQ12879 1464 aa19.23■□□□□ 0.67
TP53-202ENST00000359597 FAM9AQ8IZU1 332 aaPredicted RBP19.22■□□□□ 0.67
TP53-202ENST00000359597 RAPGEF2Q9Y4G8 1499 aa19.21■□□□□ 0.67
TP53-202ENST00000359597 PRXQ9BXM0 1461 aa19.19■□□□□ 0.66
TP53-202ENST00000359597 KIF21BO75037 1637 aa19.16■□□□□ 0.66
TP53-202ENST00000359597 OSCARQ8IYS5 282 aa19.16■□□□□ 0.66
TP53-202ENST00000359597 NUP160Q12769 1436 aa19.12■□□□□ 0.65
TP53-202ENST00000359597 CEP170Q5SW79 1584 aa19.1■□□□□ 0.65
TP53-202ENST00000359597 GOLGA3Q08378 1498 aa19.08■□□□□ 0.64
TP53-202ENST00000359597 CLASP1Q7Z460 1538 aa19.06■□□□□ 0.64
TP53-202ENST00000359597 CTTNBP2Q8WZ74 1663 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms