RNA–Protein interactions for RNA: ENST00000359492.6

APOA1-202, Transcript of apolipoprotein A1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene APOA1, Length 932 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1-202ENST00000359492 NISCHQ9Y2I1 1504 aa34.93■■■■□ 3.18
APOA1-202ENST00000359492 ABCC9O60706 1549 aa31.48■■■□□ 2.63
APOA1-202ENST00000359492 CCDC180Q9P1Z9 1646 aa31.38■■■□□ 2.61
APOA1-202ENST00000359492 RB1CC1Q8TDY2 1594 aa29.89■■■□□ 2.38
APOA1-202ENST00000359492 DNAJC5BQ9UF47 199 aa29.77■■■□□ 2.36
APOA1-202ENST00000359492 NACADO15069 1562 aa29.69■■■□□ 2.34
APOA1-202ENST00000359492 DCAF8L2P0C7V8 631 aa29.33■■■□□ 2.29
APOA1-202ENST00000359492 UNC13AQ9UPW8 1703 aa29.31■■■□□ 2.28
APOA1-202ENST00000359492 MYO15BQ96JP2 1530 aa29.3■■■□□ 2.28
APOA1-202ENST00000359492 PABPN1Q86U42 306 aaKnown RBP eCLIP29.27■■■□□ 2.28
APOA1-202ENST00000359492 BICRAQ9NZM4 1560 aa29.17■■■□□ 2.26
APOA1-202ENST00000359492 ZCCHC6Q5VYS8 1495 aaKnown RBP28.94■■■□□ 2.22
APOA1-202ENST00000359492 DCAF1Q9Y4B6 1507 aa28.87■■■□□ 2.21
APOA1-202ENST00000359492 SHROOM4Q9ULL8 1493 aa28.66■■■□□ 2.18
APOA1-202ENST00000359492 SCRIBQ14160 1630 aa28.55■■■□□ 2.16
APOA1-202ENST00000359492 CC2D2AQ9P2K1 1620 aa28.46■■■□□ 2.15
APOA1-202ENST00000359492 EIF4G1Q04637 1599 aaKnown RBP28.37■■■□□ 2.13
APOA1-202ENST00000359492 CECR2Q9BXF3 1484 aa28.36■■■□□ 2.13
APOA1-202ENST00000359492 NCAPD3P42695 1498 aa27.45■■□□□ 1.99
APOA1-202ENST00000359492 DNAJC5Q9H3Z4 198 aa27.35■■□□□ 1.97
APOA1-202ENST00000359492 ATAD2BQ9ULI0 1458 aa27.34■■□□□ 1.97
APOA1-202ENST00000359492 SMARCA4P51532 1647 aa27.27■■□□□ 1.96
APOA1-202ENST00000359492 HMGXB3Q12766 1538 aa27.21■■□□□ 1.95
APOA1-202ENST00000359492 SMARCA2P51531 1590 aa27.2■■□□□ 1.94
APOA1-202ENST00000359492 CUX2O14529 1486 aa27.19■■□□□ 1.94
APOA1-202ENST00000359492 ERCC6Q03468 1493 aa27.09■■□□□ 1.93
APOA1-202ENST00000359492 BAZ1AQ9NRL2 1556 aaPredicted RBP27.07■■□□□ 1.92
APOA1-202ENST00000359492 PEG3Q9GZU2 1588 aa27.06■■□□□ 1.92
APOA1-202ENST00000359492 NESP48681 1621 aa27.05■■□□□ 1.92
APOA1-202ENST00000359492 BAZ1BQ9UIG0 1483 aaKnown RBP27■■□□□ 1.91
APOA1-202ENST00000359492 MROH2BQ7Z745 1585 aa26.93■■□□□ 1.9
APOA1-202ENST00000359492 THOC2Q8NI27 1593 aaKnown RBP26.82■■□□□ 1.88
APOA1-202ENST00000359492 LAMC3Q9Y6N6 1575 aa26.8■■□□□ 1.88
APOA1-202ENST00000359492 KIF21AQ7Z4S6 1674 aa26.69■■□□□ 1.86
APOA1-202ENST00000359492 PDS5BQ9NTI5 1447 aa26.6■■□□□ 1.85
APOA1-202ENST00000359492 WIZO95785 1651 aa26.57■■□□□ 1.84
APOA1-202ENST00000359492 CADPSQ9ULU8 1353 aa26.57■■□□□ 1.84
APOA1-202ENST00000359492 MRC2Q9UBG0 1479 aa26.42■■□□□ 1.82
APOA1-202ENST00000359492 WDR62O43379 1518 aa26.41■■□□□ 1.82
APOA1-202ENST00000359492 RSF1Q96T23 1441 aaPredicted RBP26.32■■□□□ 1.8
APOA1-202ENST00000359492 CFTRP13569 1480 aa26.28■■□□□ 1.8
APOA1-202ENST00000359492 CEP164Q9UPV0 1460 aa26.26■■□□□ 1.79
APOA1-202ENST00000359492 FANCD2Q9BXW9 1451 aa26.25■■□□□ 1.79
APOA1-202ENST00000359492 TOP2AP11388 1531 aaKnown RBP26.22■■□□□ 1.79
APOA1-202ENST00000359492 URB2Q14146 1524 aaKnown RBP26.11■■□□□ 1.77
APOA1-202ENST00000359492 PRDM2Q13029 1718 aa25.97■■□□□ 1.75
APOA1-202ENST00000359492 TRIM41Q8WV44 630 aa25.96■■□□□ 1.75
APOA1-202ENST00000359492 CCDC88BA6NC98 1476 aa25.94■■□□□ 1.74
APOA1-202ENST00000359492 OSCARQ8IYS5 282 aa25.87■■□□□ 1.73
APOA1-202ENST00000359492 ZNF608Q9ULD9 1512 aaPredicted RBP25.8■■□□□ 1.72
APOA1-202ENST00000359492 IFT140Q96RY7 1462 aa25.77■■□□□ 1.72
APOA1-202ENST00000359492 TOPBP1Q92547 1522 aa25.77■■□□□ 1.72
APOA1-202ENST00000359492 DNMBPQ6XZF7 1577 aa25.65■■□□□ 1.7
APOA1-202ENST00000359492 ABCC8Q09428 1581 aa25.64■■□□□ 1.69
APOA1-202ENST00000359492 RIMBP3CA6NJZ7 1639 aa25.63■■□□□ 1.69
APOA1-202ENST00000359492 RIMBP3BA6NNM3 1639 aa25.63■■□□□ 1.69
APOA1-202ENST00000359492 RIMBP3Q9UFD9 1639 aa25.63■■□□□ 1.69
APOA1-202ENST00000359492 EIF4G3O43432 1585 aaKnown RBP25.61■■□□□ 1.69
APOA1-202ENST00000359492 TARBP1Q13395 1621 aaKnown RBP25.59■■□□□ 1.69
APOA1-202ENST00000359492 ARHGEF11O15085 1522 aa25.53■■□□□ 1.68
APOA1-202ENST00000359492 AQRO60306 1485 aaKnown RBP eCLIP25.51■■□□□ 1.671e-12■■■■■ 43.8
APOA1-202ENST00000359492 POLA1P09884 1462 aaPredicted RBP25.5■■□□□ 1.67
APOA1-202ENST00000359492 CHD1O14646 1710 aa25.44■■□□□ 1.66
APOA1-202ENST00000359492 RAD54L2Q9Y4B4 1467 aa25.4■■□□□ 1.66
APOA1-202ENST00000359492 SOGA1O94964 1423 aa25.33■■□□□ 1.65
APOA1-202ENST00000359492 TDRD9Q8NDG6 1382 aaKnown RBP25.31■■□□□ 1.64
APOA1-202ENST00000359492 CUX1P39880 1505 aa25.31■■□□□ 1.64
APOA1-202ENST00000359492 FGD5Q6ZNL6 1462 aa25.3■■□□□ 1.64
APOA1-202ENST00000359492 ARAP1Q96P48 1450 aa25.29■■□□□ 1.64
APOA1-202ENST00000359492 CYB5RLQ6IPT4 315 aa25.27■■□□□ 1.64
APOA1-202ENST00000359492 WDR97A6NE52 1622 aa25.26■■□□□ 1.63
APOA1-202ENST00000359492 SNAPC4Q5SXM2 1469 aa25.23■■□□□ 1.63
APOA1-202ENST00000359492 FBLN2P98095 1184 aa25.22■■□□□ 1.63
APOA1-202ENST00000359492 CLASP1Q7Z460 1538 aa25.21■■□□□ 1.63
APOA1-202ENST00000359492 MAGI1Q96QZ7 1491 aaPredicted RBP25.16■■□□□ 1.62
APOA1-202ENST00000359492 GRIN2BQ13224 1484 aa25.14■■□□□ 1.61
APOA1-202ENST00000359492 SYNJ2O15056 1496 aa25.08■■□□□ 1.6
APOA1-202ENST00000359492 SYNJ1O43426 1573 aa25.07■■□□□ 1.6
APOA1-202ENST00000359492 CHMP7Q8WUX9 453 aaPredicted RBP25.06■■□□□ 1.6
APOA1-202ENST00000359492 PBRM1Q86U86 1689 aa25.04■■□□□ 1.6
APOA1-202ENST00000359492 GAPVD1Q14C86 1478 aa25.03■■□□□ 1.6
APOA1-202ENST00000359492 ABCA10Q8WWZ4 1543 aa25.03■■□□□ 1.6
APOA1-202ENST00000359492 ABCA5Q8WWZ7 1642 aa25.03■■□□□ 1.6
APOA1-202ENST00000359492 TRHP20396 242 aaPredicted RBP24.94■■□□□ 1.58
APOA1-202ENST00000359492 SUPT5HO00267 1087 aaKnown RBP24.9■■□□□ 1.58
APOA1-202ENST00000359492 BIVM-ERCC5R4GMW8 1640 aa24.86■■□□□ 1.57
APOA1-202ENST00000359492 TOP2BQ02880 1626 aa24.84■■□□□ 1.57
APOA1-202ENST00000359492 GRIN2AQ12879 1464 aa24.83■■□□□ 1.57
APOA1-202ENST00000359492 WRNQ14191 1432 aaPredicted RBP eCLIP24.83■■□□□ 1.57
APOA1-202ENST00000359492 ADAMTS12P58397 1594 aa24.82■■□□□ 1.56
APOA1-202ENST00000359492 ERCC6L2Q5T890 1561 aa24.82■■□□□ 1.56
APOA1-202ENST00000359492 NUP160Q12769 1436 aa24.8■■□□□ 1.56
APOA1-202ENST00000359492 CEP170Q5SW79 1584 aa24.79■■□□□ 1.56
APOA1-202ENST00000359492 SHROOM2Q13796 1616 aa24.72■■□□□ 1.55
APOA1-202ENST00000359492 FHAD1B1AJZ9 1412 aa24.71■■□□□ 1.55
APOA1-202ENST00000359492 ERICH3Q5RHP9 1530 aa24.69■■□□□ 1.54
APOA1-202ENST00000359492 PRG4Q92954 1404 aaPredicted RBP24.5■■□□□ 1.51
APOA1-202ENST00000359492 RUSC2Q8N2Y8 1516 aa24.48■■□□□ 1.51
APOA1-202ENST00000359492 JPH4Q96JJ6 628 aa24.47■■□□□ 1.51
APOA1-202ENST00000359492 KIF13AQ9H1H9 1805 aa24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms