RNA–Protein interactions for RNA: ENST00000359297.6

STK40-201, Transcript of serine/threonine kinase 40, humanhuman

TSL 2 BASIC

Gene STK40, Length 4,837 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STK40-201ENST00000359297 PELP1Q8IZL8 1130 aaKnown RBP23.41■■□□□ 1.34
STK40-201ENST00000359297 MYT1Q01538 1121 aa23.35■■□□□ 1.33
STK40-201ENST00000359297 NISCHQ9Y2I1 1504 aa22.72■■□□□ 1.23
STK40-201ENST00000359297 DCAF8L2P0C7V8 631 aa22.17■■□□□ 1.14
STK40-201ENST00000359297 CENPBP07199 599 aaPredicted RBP21.76■■□□□ 1.07
STK40-201ENST00000359297 SUPT5HO00267 1087 aaKnown RBP21.62■■□□□ 1.05
STK40-201ENST00000359297 ERICH6Q7L0X2 663 aa21.55■■□□□ 1.04
STK40-201ENST00000359297 TTBK1Q5TCY1 1321 aaPredicted RBP21.53■■□□□ 1.04
STK40-201ENST00000359297 PCGF6Q9BYE7 350 aa21.46■■□□□ 1.03
STK40-201ENST00000359297 ZEB1P37275 1124 aaPredicted RBP21.3■■□□□ 1
STK40-201ENST00000359297 SHROOM4Q9ULL8 1493 aa21.29■■□□□ 1
STK40-201ENST00000359297 CCER1Q8TC90 406 aaPredicted RBP21.28■■□□□ 1
STK40-201ENST00000359297 HRCP23327 699 aa21.28■■□□□ 1
STK40-201ENST00000359297 YTHDC1Q96MU7 727 aaKnown RBP20.78■□□□□ 0.92
STK40-201ENST00000359297 NEFLP07196 543 aa20.67■□□□□ 0.9
STK40-201ENST00000359297 PPARGC1BQ86YN6 1023 aaKnown RBP20.65■□□□□ 0.9
STK40-201ENST00000359297 GTF3C3Q9Y5Q9 886 aa20.5■□□□□ 0.87
STK40-201ENST00000359297 EHMT2Q96KQ7 1210 aa20.44■□□□□ 0.86
STK40-201ENST00000359297 TRIM26Q12899 539 aaPredicted RBP20.3■□□□□ 0.84
STK40-201ENST00000359297 RTL5Q5HYW3 569 aaPredicted RBP20.3■□□□□ 0.84
STK40-201ENST00000359297 APLP2Q06481 763 aa20.28■□□□□ 0.84
STK40-201ENST00000359297 ACIN1Q9UKV3 1341 aaKnown RBP20.26■□□□□ 0.83
STK40-201ENST00000359297 FAM9AQ8IZU1 332 aaPredicted RBP20.24■□□□□ 0.83
STK40-201ENST00000359297 TRIM41Q8WV44 630 aa20.15■□□□□ 0.82
STK40-201ENST00000359297 SCAF1Q9H7N4 1312 aaKnown RBP20.1■□□□□ 0.81
STK40-201ENST00000359297 BCL11AQ9H165 835 aa20.09■□□□□ 0.81
STK40-201ENST00000359297 DIEXFQ68CQ4 756 aaKnown RBP20.09■□□□□ 0.81
STK40-201ENST00000359297 EIF5BO60841 1220 aaKnown RBP20.03■□□□□ 0.8
STK40-201ENST00000359297 GLIPR1L2Q4G1C9 344 aa20.03■□□□□ 0.8
STK40-201ENST00000359297 DAXXQ9UER7 740 aaPredicted RBP19.97■□□□□ 0.79
STK40-201ENST00000359297 MYT1LQ9UL68 1186 aa19.92■□□□□ 0.78
STK40-201ENST00000359297 ANP32EQ9BTT0 268 aa19.81■□□□□ 0.76
STK40-201ENST00000359297 CHIC1Q5VXU3 224 aa19.79■□□□□ 0.76
STK40-201ENST00000359297 NEUROD1Q13562 356 aa19.71■□□□□ 0.75
STK40-201ENST00000359297 BCANQ96GW7 911 aa19.71■□□□□ 0.75
STK40-201ENST00000359297 UBTFP17480 764 aaKnown RBP19.69■□□□□ 0.74
STK40-201ENST00000359297 CLSPNQ9HAW4 1339 aa19.65■□□□□ 0.74
STK40-201ENST00000359297 CDK11AQ9UQ88 783 aaPredicted RBP19.65■□□□□ 0.74
STK40-201ENST00000359297 ZNF316A6NFI3 1004 aaPredicted RBP19.58■□□□□ 0.72
STK40-201ENST00000359297 RANGAP1P46060 587 aaPredicted RBP19.53■□□□□ 0.72
STK40-201ENST00000359297 LOC105371045A0A1W2PR82 267 aa19.51■□□□□ 0.71
STK40-201ENST00000359297 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.46■□□□□ 0.71
STK40-201ENST00000359297 ANP32AP39687 249 aaKnown RBP19.35■□□□□ 0.69
STK40-201ENST00000359297 PRKCSHP14314 528 aaPredicted RBP19.34■□□□□ 0.69
STK40-201ENST00000359297 ATP1B4Q9UN42 357 aaPredicted RBP19.31■□□□□ 0.68
STK40-201ENST00000359297 NBR1Q14596 966 aa19.27■□□□□ 0.67
STK40-201ENST00000359297 FKBP8Q14318 412 aa19.18■□□□□ 0.66
STK40-201ENST00000359297 CSRNP3Q8WYN3 585 aa19.13■□□□□ 0.65
STK40-201ENST00000359297 ABCC9O60706 1549 aa19.08■□□□□ 0.65
STK40-201ENST00000359297 RTN4Q9NQC3 1192 aaKnown RBP19.07■□□□□ 0.64
STK40-201ENST00000359297 HNRNPUL2Q1KMD3 747 aaKnown RBP19.04■□□□□ 0.64
STK40-201ENST00000359297 ZBTB47Q9UFB7 747 aaPredicted RBP19.04■□□□□ 0.64
STK40-201ENST00000359297 SLC24A1O60721 1099 aa19.03■□□□□ 0.64
STK40-201ENST00000359297 DEKP35659 375 aaKnown RBP18.98■□□□□ 0.63
STK40-201ENST00000359297 NPM2Q86SE8 214 aaKnown RBP18.97■□□□□ 0.63
STK40-201ENST00000359297 ZCCHC6Q5VYS8 1495 aaKnown RBP18.92■□□□□ 0.62
STK40-201ENST00000359297 ERICH6BQ5W0A0 696 aa18.92■□□□□ 0.62
STK40-201ENST00000359297 ITGAEP38570 1179 aa18.91■□□□□ 0.62
STK40-201ENST00000359297 ANP32CO43423 234 aa18.89■□□□□ 0.61
STK40-201ENST00000359297 TNNT2P45379 298 aaPredicted RBP18.89■□□□□ 0.61
STK40-201ENST00000359297 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.88■□□□□ 0.61
STK40-201ENST00000359297 ANP32BQ92688 251 aaKnown RBP18.84■□□□□ 0.61
STK40-201ENST00000359297 NEFMP07197 916 aa18.84■□□□□ 0.61
STK40-201ENST00000359297 DCAF1Q9Y4B6 1507 aa18.82■□□□□ 0.6
STK40-201ENST00000359297 PABPN1Q86U42 306 aaKnown RBP eCLIP18.8■□□□□ 0.6
STK40-201ENST00000359297 CCDC136Q96JN2 1154 aa18.76■□□□□ 0.59
STK40-201ENST00000359297 MIER1Q8N108 512 aa18.76■□□□□ 0.59
STK40-201ENST00000359297 NAP1L5Q96NT1 182 aaPredicted RBP18.75■□□□□ 0.59
STK40-201ENST00000359297 SUPT16HQ9Y5B9 1047 aaKnown RBP18.74■□□□□ 0.59
STK40-201ENST00000359297 CCDC180Q9P1Z9 1646 aa18.73■□□□□ 0.59
STK40-201ENST00000359297 CDK11BP21127 795 aaKnown RBP18.71■□□□□ 0.59
STK40-201ENST00000359297 POLR3GLQ9BT43 218 aa18.69■□□□□ 0.58
STK40-201ENST00000359297 NCLP19338 710 aaKnown RBP18.68■□□□□ 0.58
STK40-201ENST00000359297 CNGB1Q14028 1251 aaPredicted RBP18.67■□□□□ 0.58
STK40-201ENST00000359297 PODXL2Q9NZ53 605 aa18.66■□□□□ 0.58
STK40-201ENST00000359297 NOP58Q9Y2X3 529 aaKnown RBP18.66■□□□□ 0.58
STK40-201ENST00000359297 PKNOX2Q96KN3 472 aa18.66■□□□□ 0.58
STK40-201ENST00000359297 RBM19Q9Y4C8 960 aaKnown RBP18.65■□□□□ 0.58
STK40-201ENST00000359297 TSHZ2Q9NRE2 1034 aa18.63■□□□□ 0.57
STK40-201ENST00000359297 PPM1GO15355 546 aaPredicted RBP18.62■□□□□ 0.57
STK40-201ENST00000359297 ARXQ96QS3 562 aa18.61■□□□□ 0.57
STK40-201ENST00000359297 VSIG10Q8N0Z9 540 aa18.6■□□□□ 0.57
STK40-201ENST00000359297 FAM50AQ14320 339 aaKnown RBP18.57■□□□□ 0.56
STK40-201ENST00000359297 TRIM44Q96DX7 344 aaPredicted RBP18.56■□□□□ 0.56
STK40-201ENST00000359297 HSP90AA1P07900 732 aaKnown RBP18.54■□□□□ 0.56
STK40-201ENST00000359297 ANO8Q9HCE9 1232 aaPredicted RBP18.53■□□□□ 0.56
STK40-201ENST00000359297 SCRIBQ14160 1630 aa18.52■□□□□ 0.56
STK40-201ENST00000359297 HNRNPUQ00839 825 aaKnown RBP eCLIP18.5■□□□□ 0.55
STK40-201ENST00000359297 DDRGK1Q96HY6 314 aa18.48■□□□□ 0.55
STK40-201ENST00000359297 TRIM52Q96A61 297 aa18.47■□□□□ 0.55
STK40-201ENST00000359297 RSPH6AQ9H0K4 717 aa18.46■□□□□ 0.55
STK40-201ENST00000359297 IRX6P78412 446 aaPredicted RBP18.42■□□□□ 0.54
STK40-201ENST00000359297 LAS1LQ9Y4W2 734 aaKnown RBP18.42■□□□□ 0.54
STK40-201ENST00000359297 HSP90AA2PQ14568 343 aaPredicted RBP18.39■□□□□ 0.53
STK40-201ENST00000359297 A0A0U1RQG5 324 aaPredicted RBP18.38■□□□□ 0.53
STK40-201ENST00000359297 AMER1Q5JTC6 1135 aaPredicted RBP18.38■□□□□ 0.53
STK40-201ENST00000359297 UPF2Q9HAU5 1272 aaKnown RBP18.37■□□□□ 0.53
STK40-201ENST00000359297 MYO15BQ96JP2 1530 aa18.34■□□□□ 0.53
STK40-201ENST00000359297 PNNQ9H307 717 aaKnown RBP18.33■□□□□ 0.53
STK40-201ENST00000359297 DDX10Q13206 875 aaKnown RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms