RNA–Protein interactions for RNA: ENST00000358763.6

SYN3-202, Transcript of synapsin III, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SYN3, Length 3,126 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-202ENST00000358763 NISCHQ9Y2I1 1504 aa26.98■■□□□ 1.91
SYN3-202ENST00000358763 CCDC180Q9P1Z9 1646 aa23.44■■□□□ 1.34
SYN3-202ENST00000358763 ZCCHC6Q5VYS8 1495 aaKnown RBP22.67■■□□□ 1.22
SYN3-202ENST00000358763 DCAF8L2P0C7V8 631 aa22.43■■□□□ 1.18
SYN3-202ENST00000358763 ABCC9O60706 1549 aa22.28■■□□□ 1.16
SYN3-202ENST00000358763 SHROOM4Q9ULL8 1493 aa22.23■■□□□ 1.15
SYN3-202ENST00000358763 DCAF1Q9Y4B6 1507 aa22.21■■□□□ 1.15
SYN3-202ENST00000358763 MYO15BQ96JP2 1530 aa21.9■■□□□ 1.1
SYN3-202ENST00000358763 NACADO15069 1562 aa21.83■■□□□ 1.08
SYN3-202ENST00000358763 SCRIBQ14160 1630 aa21.71■■□□□ 1.07
SYN3-202ENST00000358763 RB1CC1Q8TDY2 1594 aa21.66■■□□□ 1.06
SYN3-202ENST00000358763 SUPT5HO00267 1087 aaKnown RBP21.39■■□□□ 1.01
SYN3-202ENST00000358763 UNC13AQ9UPW8 1703 aa21.28■■□□□ 1
SYN3-202ENST00000358763 PABPN1Q86U42 306 aaKnown RBP eCLIP21.06■□□□□ 0.96
SYN3-202ENST00000358763 BICRAQ9NZM4 1560 aa21.04■□□□□ 0.96
SYN3-202ENST00000358763 CECR2Q9BXF3 1484 aa21.03■□□□□ 0.96
SYN3-202ENST00000358763 RSF1Q96T23 1441 aaPredicted RBP20.98■□□□□ 0.95
SYN3-202ENST00000358763 MROH2BQ7Z745 1585 aa20.9■□□□□ 0.94
SYN3-202ENST00000358763 BAZ1AQ9NRL2 1556 aaPredicted RBP20.81■□□□□ 0.92
SYN3-202ENST00000358763 WIZO95785 1651 aa20.74■□□□□ 0.91
SYN3-202ENST00000358763 SMARCA4P51532 1647 aa20.74■□□□□ 0.91
SYN3-202ENST00000358763 TOP2AP11388 1531 aaKnown RBP20.46■□□□□ 0.87
SYN3-202ENST00000358763 CHIC1Q5VXU3 224 aa20.42■□□□□ 0.86
SYN3-202ENST00000358763 PEG3Q9GZU2 1588 aa20.42■□□□□ 0.86
SYN3-202ENST00000358763 EIF4G1Q04637 1599 aaKnown RBP20.41■□□□□ 0.86
SYN3-202ENST00000358763 ATAD2BQ9ULI0 1458 aa20.38■□□□□ 0.85
SYN3-202ENST00000358763 SMARCA2P51531 1590 aa20.34■□□□□ 0.85
SYN3-202ENST00000358763 BAZ1BQ9UIG0 1483 aaKnown RBP20.29■□□□□ 0.84
SYN3-202ENST00000358763 CCDC88BA6NC98 1476 aa20.29■□□□□ 0.84
SYN3-202ENST00000358763 NCAPD3P42695 1498 aa20.16■□□□□ 0.82
SYN3-202ENST00000358763 HMGXB3Q12766 1538 aa20.13■□□□□ 0.81
SYN3-202ENST00000358763 CC2D2AQ9P2K1 1620 aa20.11■□□□□ 0.81
SYN3-202ENST00000358763 TRIM41Q8WV44 630 aa20.03■□□□□ 0.8
SYN3-202ENST00000358763 ABCC8Q09428 1581 aa19.95■□□□□ 0.78
SYN3-202ENST00000358763 FAM9AQ8IZU1 332 aaPredicted RBP19.78■□□□□ 0.76
SYN3-202ENST00000358763 WRNQ14191 1432 aaPredicted RBP eCLIP19.75■□□□□ 0.75
SYN3-202ENST00000358763 CFTRP13569 1480 aa19.75■□□□□ 0.75
SYN3-202ENST00000358763 LOC105371045A0A1W2PR82 267 aa19.72■□□□□ 0.75
SYN3-202ENST00000358763 DNAJC5BQ9UF47 199 aa19.7■□□□□ 0.74
SYN3-202ENST00000358763 SYNJ1O43426 1573 aa19.69■□□□□ 0.74
SYN3-202ENST00000358763 CADPSQ9ULU8 1353 aa19.68■□□□□ 0.74
SYN3-202ENST00000358763 PRDM2Q13029 1718 aa19.63■□□□□ 0.73
SYN3-202ENST00000358763 NESP48681 1621 aa19.58■□□□□ 0.73
SYN3-202ENST00000358763 EHMT2Q96KQ7 1210 aa19.58■□□□□ 0.72
SYN3-202ENST00000358763 SOGA1O94964 1423 aa19.57■□□□□ 0.72
SYN3-202ENST00000358763 TOP2BQ02880 1626 aa19.55■□□□□ 0.72
SYN3-202ENST00000358763 CUX1P39880 1505 aa19.53■□□□□ 0.72
SYN3-202ENST00000358763 BIVM-ERCC5R4GMW8 1640 aa19.52■□□□□ 0.72
SYN3-202ENST00000358763 RUSC2Q8N2Y8 1516 aa19.51■□□□□ 0.71
SYN3-202ENST00000358763 FANCD2Q9BXW9 1451 aa19.49■□□□□ 0.71
SYN3-202ENST00000358763 LAMC3Q9Y6N6 1575 aa19.47■□□□□ 0.71
SYN3-202ENST00000358763 EEA1Q15075 1411 aa19.41■□□□□ 0.7
SYN3-202ENST00000358763 CSRNP3Q8WYN3 585 aa19.38■□□□□ 0.69
SYN3-202ENST00000358763 CEP164Q9UPV0 1460 aa19.36■□□□□ 0.69
SYN3-202ENST00000358763 PDS5BQ9NTI5 1447 aa19.33■□□□□ 0.69
SYN3-202ENST00000358763 FGD5Q6ZNL6 1462 aa19.31■□□□□ 0.68
SYN3-202ENST00000358763 KIF21AQ7Z4S6 1674 aa19.31■□□□□ 0.68
SYN3-202ENST00000358763 DNMBPQ6XZF7 1577 aa19.3■□□□□ 0.68
SYN3-202ENST00000358763 TOPBP1Q92547 1522 aa19.28■□□□□ 0.68
SYN3-202ENST00000358763 URB2Q14146 1524 aaKnown RBP19.26■□□□□ 0.67
SYN3-202ENST00000358763 KIF27Q86VH2 1401 aa19.22■□□□□ 0.67
SYN3-202ENST00000358763 GOLGA3Q08378 1498 aa19.21■□□□□ 0.67
SYN3-202ENST00000358763 CUX2O14529 1486 aa19.21■□□□□ 0.67
SYN3-202ENST00000358763 POLA1P09884 1462 aaPredicted RBP19.2■□□□□ 0.66
SYN3-202ENST00000358763 UBTFP17480 764 aaKnown RBP19.2■□□□□ 0.66
SYN3-202ENST00000358763 KIF21BO75037 1637 aa19.2■□□□□ 0.66
SYN3-202ENST00000358763 RAD54L2Q9Y4B4 1467 aa19.19■□□□□ 0.66
SYN3-202ENST00000358763 RAPGEF2Q9Y4G8 1499 aa19.15■□□□□ 0.66
SYN3-202ENST00000358763 TNIKQ9UKE5 1360 aa19.14■□□□□ 0.66
SYN3-202ENST00000358763 CEP162Q5TB80 1403 aa19.11■□□□□ 0.65
SYN3-202ENST00000358763 MRC2Q9UBG0 1479 aa19.1■□□□□ 0.65
SYN3-202ENST00000358763 PRXQ9BXM0 1461 aa19.1■□□□□ 0.65
SYN3-202ENST00000358763 ABCA10Q8WWZ4 1543 aa19.09■□□□□ 0.65
SYN3-202ENST00000358763 ERCC6Q03468 1493 aa19.07■□□□□ 0.64
SYN3-202ENST00000358763 IGF1RP08069 1367 aa19.06■□□□□ 0.64
SYN3-202ENST00000358763 ERICH3Q5RHP9 1530 aa19.04■□□□□ 0.64
SYN3-202ENST00000358763 WDR97A6NE52 1622 aa19.03■□□□□ 0.64
SYN3-202ENST00000358763 TDRD9Q8NDG6 1382 aaKnown RBP19■□□□□ 0.63
SYN3-202ENST00000358763 RANGAP1P46060 587 aaPredicted RBP18.99■□□□□ 0.63
SYN3-202ENST00000358763 WDR62O43379 1518 aa18.98■□□□□ 0.63
SYN3-202ENST00000358763 TARBP1Q13395 1621 aaKnown RBP18.97■□□□□ 0.63
SYN3-202ENST00000358763 CARMIL1Q5VZK9 1371 aa18.97■□□□□ 0.63
SYN3-202ENST00000358763 ABCA5Q8WWZ7 1642 aa18.94■□□□□ 0.62
SYN3-202ENST00000358763 THOC2Q8NI27 1593 aaKnown RBP18.94■□□□□ 0.62
SYN3-202ENST00000358763 CLIP1P30622 1438 aa18.94■□□□□ 0.62
SYN3-202ENST00000358763 GAPVD1Q14C86 1478 aa18.92■□□□□ 0.62
SYN3-202ENST00000358763 CUL7Q14999 1698 aa18.87■□□□□ 0.61
SYN3-202ENST00000358763 PPARGC1BQ86YN6 1023 aaKnown RBP18.87■□□□□ 0.61
SYN3-202ENST00000358763 PCGF6Q9BYE7 350 aa18.87■□□□□ 0.61
SYN3-202ENST00000358763 AQRO60306 1485 aaKnown RBP eCLIP18.86■□□□□ 0.61
SYN3-202ENST00000358763 IFT140Q96RY7 1462 aa18.85■□□□□ 0.61
SYN3-202ENST00000358763 ZNF608Q9ULD9 1512 aaPredicted RBP18.84■□□□□ 0.61
SYN3-202ENST00000358763 PBRM1Q86U86 1689 aa18.81■□□□□ 0.6
SYN3-202ENST00000358763 TRIM26Q12899 539 aaPredicted RBP18.76■□□□□ 0.59
SYN3-202ENST00000358763 VPS8Q8N3P4 1428 aa18.75■□□□□ 0.59
SYN3-202ENST00000358763 ARAP1Q96P48 1450 aa18.75■□□□□ 0.59
SYN3-202ENST00000358763 GRIN2BQ13224 1484 aa18.74■□□□□ 0.59
SYN3-202ENST00000358763 EIF4G3O43432 1585 aaKnown RBP18.74■□□□□ 0.59
SYN3-202ENST00000358763 TTBK1Q5TCY1 1321 aaPredicted RBP18.74■□□□□ 0.59
SYN3-202ENST00000358763 ARHGAP35Q9NRY4 1499 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms