RNA–Protein interactions for RNA: ENST00000358303.8

ZC3HC1-202, Transcript of zinc finger C3HC-type containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZC3HC1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1-202ENST00000358303 NISCHQ9Y2I1 1504 aa27.43■■□□□ 1.98
ZC3HC1-202ENST00000358303 CCDC180Q9P1Z9 1646 aa24.08■■□□□ 1.44
ZC3HC1-202ENST00000358303 ABCC9O60706 1549 aa23.17■■□□□ 1.3
ZC3HC1-202ENST00000358303 ZCCHC6Q5VYS8 1495 aaKnown RBP22.96■■□□□ 1.27
ZC3HC1-202ENST00000358303 DCAF8L2P0C7V8 631 aa22.85■■□□□ 1.25
ZC3HC1-202ENST00000358303 DCAF1Q9Y4B6 1507 aa22.64■■□□□ 1.22
ZC3HC1-202ENST00000358303 NACADO15069 1562 aa22.51■■□□□ 1.19
ZC3HC1-202ENST00000358303 MYO15BQ96JP2 1530 aa22.5■■□□□ 1.19
ZC3HC1-202ENST00000358303 RB1CC1Q8TDY2 1594 aa22.43■■□□□ 1.18
ZC3HC1-202ENST00000358303 SHROOM4Q9ULL8 1493 aa22.19■■□□□ 1.14
ZC3HC1-202ENST00000358303 SCRIBQ14160 1630 aa22.15■■□□□ 1.14
ZC3HC1-202ENST00000358303 UNC13AQ9UPW8 1703 aa21.97■■□□□ 1.11
ZC3HC1-202ENST00000358303 PABPN1Q86U42 306 aaKnown RBP eCLIP21.79■■□□□ 1.08
ZC3HC1-202ENST00000358303 BICRAQ9NZM4 1560 aa21.77■■□□□ 1.08
ZC3HC1-202ENST00000358303 CECR2Q9BXF3 1484 aa21.37■■□□□ 1.01
ZC3HC1-202ENST00000358303 BAZ1AQ9NRL2 1556 aaPredicted RBP21.2■□□□□ 0.98
ZC3HC1-202ENST00000358303 MROH2BQ7Z745 1585 aa21.2■□□□□ 0.98
ZC3HC1-202ENST00000358303 SMARCA4P51532 1647 aa21.17■□□□□ 0.98
ZC3HC1-202ENST00000358303 EIF4G1Q04637 1599 aaKnown RBP21.14■□□□□ 0.98
ZC3HC1-202ENST00000358303 SUPT5HO00267 1087 aaKnown RBP21.14■□□□□ 0.98
ZC3HC1-202ENST00000358303 RSF1Q96T23 1441 aaPredicted RBP21.14■□□□□ 0.97
ZC3HC1-202ENST00000358303 WIZO95785 1651 aa21.01■□□□□ 0.95
ZC3HC1-202ENST00000358303 CC2D2AQ9P2K1 1620 aa20.93■□□□□ 0.94
ZC3HC1-202ENST00000358303 ATAD2BQ9ULI0 1458 aa20.92■□□□□ 0.94
ZC3HC1-202ENST00000358303 PEG3Q9GZU2 1588 aa20.9■□□□□ 0.94
ZC3HC1-202ENST00000358303 SMARCA2P51531 1590 aa20.89■□□□□ 0.93
ZC3HC1-202ENST00000358303 BAZ1BQ9UIG0 1483 aaKnown RBP20.79■□□□□ 0.92
ZC3HC1-202ENST00000358303 NCAPD3P42695 1498 aa20.78■□□□□ 0.92
ZC3HC1-202ENST00000358303 DNAJC5BQ9UF47 199 aa20.78■□□□□ 0.92
ZC3HC1-202ENST00000358303 TOP2AP11388 1531 aaKnown RBP20.76■□□□□ 0.91
ZC3HC1-202ENST00000358303 HMGXB3Q12766 1538 aa20.73■□□□□ 0.91
ZC3HC1-202ENST00000358303 CCDC88BA6NC98 1476 aa20.55■□□□□ 0.88
ZC3HC1-202ENST00000358303 CADPSQ9ULU8 1353 aa20.24■□□□□ 0.83
ZC3HC1-202ENST00000358303 NESP48681 1621 aa20.23■□□□□ 0.83
ZC3HC1-202ENST00000358303 CFTRP13569 1480 aa20.22■□□□□ 0.83
ZC3HC1-202ENST00000358303 LAMC3Q9Y6N6 1575 aa20.15■□□□□ 0.82
ZC3HC1-202ENST00000358303 PRDM2Q13029 1718 aa20.09■□□□□ 0.81
ZC3HC1-202ENST00000358303 FANCD2Q9BXW9 1451 aa20.03■□□□□ 0.8
ZC3HC1-202ENST00000358303 ABCC8Q09428 1581 aa20.03■□□□□ 0.8
ZC3HC1-202ENST00000358303 PDS5BQ9NTI5 1447 aa20.01■□□□□ 0.79
ZC3HC1-202ENST00000358303 CHIC1Q5VXU3 224 aa20■□□□□ 0.79
ZC3HC1-202ENST00000358303 KIF21AQ7Z4S6 1674 aa19.96■□□□□ 0.79
ZC3HC1-202ENST00000358303 CEP164Q9UPV0 1460 aa19.94■□□□□ 0.78
ZC3HC1-202ENST00000358303 WRNQ14191 1432 aaPredicted RBP eCLIP19.92■□□□□ 0.78
ZC3HC1-202ENST00000358303 ERCC6Q03468 1493 aa19.91■□□□□ 0.78
ZC3HC1-202ENST00000358303 TRIM41Q8WV44 630 aa19.88■□□□□ 0.77
ZC3HC1-202ENST00000358303 SYNJ1O43426 1573 aa19.86■□□□□ 0.77
ZC3HC1-202ENST00000358303 CUX1P39880 1505 aa19.85■□□□□ 0.77
ZC3HC1-202ENST00000358303 URB2Q14146 1524 aaKnown RBP19.81■□□□□ 0.76
ZC3HC1-202ENST00000358303 TOP2BQ02880 1626 aa19.78■□□□□ 0.76
ZC3HC1-202ENST00000358303 MRC2Q9UBG0 1479 aa19.78■□□□□ 0.76
ZC3HC1-202ENST00000358303 TOPBP1Q92547 1522 aa19.77■□□□□ 0.76
ZC3HC1-202ENST00000358303 DNMBPQ6XZF7 1577 aa19.77■□□□□ 0.76
ZC3HC1-202ENST00000358303 BIVM-ERCC5R4GMW8 1640 aa19.76■□□□□ 0.75
ZC3HC1-202ENST00000358303 THOC2Q8NI27 1593 aaKnown RBP19.72■□□□□ 0.75
ZC3HC1-202ENST00000358303 FGD5Q6ZNL6 1462 aa19.69■□□□□ 0.74
ZC3HC1-202ENST00000358303 WDR62O43379 1518 aa19.68■□□□□ 0.74
ZC3HC1-202ENST00000358303 POLA1P09884 1462 aaPredicted RBP19.65■□□□□ 0.74
ZC3HC1-202ENST00000358303 PELP1Q8IZL8 1130 aaKnown RBP19.61■□□□□ 0.73
ZC3HC1-202ENST00000358303 RAD54L2Q9Y4B4 1467 aa19.6■□□□□ 0.73
ZC3HC1-202ENST00000358303 SOGA1O94964 1423 aa19.58■□□□□ 0.72
ZC3HC1-202ENST00000358303 CUX2O14529 1486 aa19.55■□□□□ 0.72
ZC3HC1-202ENST00000358303 FAM9AQ8IZU1 332 aaPredicted RBP19.55■□□□□ 0.72
ZC3HC1-202ENST00000358303 RUSC2Q8N2Y8 1516 aa19.52■□□□□ 0.71
ZC3HC1-202ENST00000358303 TARBP1Q13395 1621 aaKnown RBP19.5■□□□□ 0.71
ZC3HC1-202ENST00000358303 ABCA10Q8WWZ4 1543 aa19.48■□□□□ 0.71
ZC3HC1-202ENST00000358303 IFT140Q96RY7 1462 aa19.47■□□□□ 0.71
ZC3HC1-202ENST00000358303 WDR97A6NE52 1622 aa19.46■□□□□ 0.71
ZC3HC1-202ENST00000358303 TDRD9Q8NDG6 1382 aaKnown RBP19.44■□□□□ 0.7
ZC3HC1-202ENST00000358303 KIF27Q86VH2 1401 aa19.44■□□□□ 0.7
ZC3HC1-202ENST00000358303 ZNF608Q9ULD9 1512 aaPredicted RBP19.41■□□□□ 0.7
ZC3HC1-202ENST00000358303 EEA1Q15075 1411 aa19.39■□□□□ 0.69
ZC3HC1-202ENST00000358303 AQRO60306 1485 aaKnown RBP eCLIP19.38■□□□□ 0.693e-6■■■□□ 16.9
ZC3HC1-202ENST00000358303 ABCA5Q8WWZ7 1642 aa19.36■□□□□ 0.69
ZC3HC1-202ENST00000358303 CSRNP3Q8WYN3 585 aa19.35■□□□□ 0.69
ZC3HC1-202ENST00000358303 GAPVD1Q14C86 1478 aa19.35■□□□□ 0.69
ZC3HC1-202ENST00000358303 EIF4G3O43432 1585 aaKnown RBP19.33■□□□□ 0.69
ZC3HC1-202ENST00000358303 AEBP2Q6ZN18 517 aaPredicted RBP19.33■□□□□ 0.68
ZC3HC1-202ENST00000358303 EHMT2Q96KQ7 1210 aa19.33■□□□□ 0.68
ZC3HC1-202ENST00000358303 IGF1RP08069 1367 aa19.31■□□□□ 0.68
ZC3HC1-202ENST00000358303 PBRM1Q86U86 1689 aa19.27■□□□□ 0.68
ZC3HC1-202ENST00000358303 GRIN2BQ13224 1484 aa19.26■□□□□ 0.67
ZC3HC1-202ENST00000358303 LOC105371045A0A1W2PR82 267 aa19.26■□□□□ 0.67
ZC3HC1-202ENST00000358303 ERICH3Q5RHP9 1530 aa19.24■□□□□ 0.67
ZC3HC1-202ENST00000358303 CARMIL1Q5VZK9 1371 aa19.2■□□□□ 0.66
ZC3HC1-202ENST00000358303 PRXQ9BXM0 1461 aa19.2■□□□□ 0.66
ZC3HC1-202ENST00000358303 SNAPC4Q5SXM2 1469 aa19.2■□□□□ 0.66
ZC3HC1-202ENST00000358303 RAPGEF2Q9Y4G8 1499 aa19.18■□□□□ 0.66
ZC3HC1-202ENST00000358303 CUL7Q14999 1698 aa19.18■□□□□ 0.66
ZC3HC1-202ENST00000358303 KIF21BO75037 1637 aa19.18■□□□□ 0.66
ZC3HC1-202ENST00000358303 ADAMTS12P58397 1594 aa19.15■□□□□ 0.66
ZC3HC1-202ENST00000358303 MYT1Q01538 1121 aa19.15■□□□□ 0.66
ZC3HC1-202ENST00000358303 GOLGA3Q08378 1498 aa19.14■□□□□ 0.65
ZC3HC1-202ENST00000358303 MAGI1Q96QZ7 1491 aaPredicted RBP19.13■□□□□ 0.65
ZC3HC1-202ENST00000358303 FHAD1B1AJZ9 1412 aa19.12■□□□□ 0.65
ZC3HC1-202ENST00000358303 UBTFP17480 764 aaKnown RBP19.11■□□□□ 0.65
ZC3HC1-202ENST00000358303 FBLN2P98095 1184 aa19.08■□□□□ 0.65
ZC3HC1-202ENST00000358303 HRCP23327 699 aa19.08■□□□□ 0.64
ZC3HC1-202ENST00000358303 SYNJ2O15056 1496 aa19.06■□□□□ 0.64
ZC3HC1-202ENST00000358303 CHMP7Q8WUX9 453 aaPredicted RBP19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms