RNA–Protein interactions for RNA: ENST00000357898.3

SPSB1-202, Transcript of splA/ryanodine receptor domain and SOCS box containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SPSB1, Length 1,439 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB1-202ENST00000357898 NISCHQ9Y2I1 1504 aa41.08■■■■■ 4.17
SPSB1-202ENST00000357898 CCDC180Q9P1Z9 1646 aa36.69■■■■□ 3.46
SPSB1-202ENST00000357898 ABCC9O60706 1549 aa36.51■■■■□ 3.44
SPSB1-202ENST00000357898 RB1CC1Q8TDY2 1594 aa34.85■■■■□ 3.17
SPSB1-202ENST00000357898 DCAF8L2P0C7V8 631 aa34.79■■■■□ 3.16
SPSB1-202ENST00000357898 NACADO15069 1562 aa34.67■■■■□ 3.14
SPSB1-202ENST00000357898 MYO15BQ96JP2 1530 aa34.23■■■■□ 3.07
SPSB1-202ENST00000357898 PABPN1Q86U42 306 aaKnown RBP eCLIP34.1■■■■□ 3.05
SPSB1-202ENST00000357898 ZCCHC6Q5VYS8 1495 aaKnown RBP34.08■■■■□ 3.05
SPSB1-202ENST00000357898 UNC13AQ9UPW8 1703 aa33.98■■■■□ 3.03
SPSB1-202ENST00000357898 DNAJC5BQ9UF47 199 aa33.96■■■■□ 3.03
SPSB1-202ENST00000357898 DCAF1Q9Y4B6 1507 aa33.91■■■■□ 3.02
SPSB1-202ENST00000357898 BICRAQ9NZM4 1560 aa33.74■■■□□ 2.99
SPSB1-202ENST00000357898 SCRIBQ14160 1630 aa33.53■■■□□ 2.96
SPSB1-202ENST00000357898 SHROOM4Q9ULL8 1493 aa33.34■■■□□ 2.93
SPSB1-202ENST00000357898 CC2D2AQ9P2K1 1620 aa32.95■■■□□ 2.87
SPSB1-202ENST00000357898 EIF4G1Q04637 1599 aaKnown RBP32.94■■■□□ 2.86
SPSB1-202ENST00000357898 CECR2Q9BXF3 1484 aa32.85■■■□□ 2.85
SPSB1-202ENST00000357898 NCAPD3P42695 1498 aa32■■■□□ 2.71
SPSB1-202ENST00000357898 SMARCA4P51532 1647 aa31.97■■■□□ 2.71
SPSB1-202ENST00000357898 ATAD2BQ9ULI0 1458 aa31.95■■■□□ 2.71
SPSB1-202ENST00000357898 SMARCA2P51531 1590 aa31.89■■■□□ 2.7
SPSB1-202ENST00000357898 BAZ1AQ9NRL2 1556 aaPredicted RBP31.88■■■□□ 2.69
SPSB1-202ENST00000357898 HMGXB3Q12766 1538 aa31.76■■■□□ 2.68
SPSB1-202ENST00000357898 BAZ1BQ9UIG0 1483 aaKnown RBP31.69■■■□□ 2.66
SPSB1-202ENST00000357898 MROH2BQ7Z745 1585 aa31.65■■■□□ 2.66
SPSB1-202ENST00000357898 PEG3Q9GZU2 1588 aa31.62■■■□□ 2.65
SPSB1-202ENST00000357898 ERCC6Q03468 1493 aa31.56■■■□□ 2.64
SPSB1-202ENST00000357898 NESP48681 1621 aa31.41■■■□□ 2.62
SPSB1-202ENST00000357898 CUX2O14529 1486 aa31.32■■■□□ 2.6
SPSB1-202ENST00000357898 WIZO95785 1651 aa31.3■■■□□ 2.6
SPSB1-202ENST00000357898 LAMC3Q9Y6N6 1575 aa31.24■■■□□ 2.59
SPSB1-202ENST00000357898 RSF1Q96T23 1441 aaPredicted RBP31.12■■■□□ 2.57
SPSB1-202ENST00000357898 PDS5BQ9NTI5 1447 aa31.12■■■□□ 2.57
SPSB1-202ENST00000357898 CADPSQ9ULU8 1353 aa31.09■■■□□ 2.57
SPSB1-202ENST00000357898 DNAJC5Q9H3Z4 198 aa31.01■■■□□ 2.55
SPSB1-202ENST00000357898 KIF21AQ7Z4S6 1674 aa30.99■■■□□ 2.55
SPSB1-202ENST00000357898 THOC2Q8NI27 1593 aaKnown RBP30.97■■■□□ 2.55
SPSB1-202ENST00000357898 TOP2AP11388 1531 aaKnown RBP30.92■■■□□ 2.54
SPSB1-202ENST00000357898 MRC2Q9UBG0 1479 aa30.78■■■□□ 2.52
SPSB1-202ENST00000357898 CFTRP13569 1480 aa30.74■■■□□ 2.51
SPSB1-202ENST00000357898 CEP164Q9UPV0 1460 aa30.74■■■□□ 2.51
SPSB1-202ENST00000357898 FANCD2Q9BXW9 1451 aa30.72■■■□□ 2.51
SPSB1-202ENST00000357898 WDR62O43379 1518 aa30.65■■■□□ 2.5
SPSB1-202ENST00000357898 CCDC88BA6NC98 1476 aa30.6■■■□□ 2.49
SPSB1-202ENST00000357898 PRDM2Q13029 1718 aa30.43■■■□□ 2.46
SPSB1-202ENST00000357898 URB2Q14146 1524 aaKnown RBP30.41■■■□□ 2.46
SPSB1-202ENST00000357898 TOPBP1Q92547 1522 aa30.15■■■□□ 2.42
SPSB1-202ENST00000357898 ABCC8Q09428 1581 aa30.15■■■□□ 2.42
SPSB1-202ENST00000357898 SUPT5HO00267 1087 aaKnown RBP30.13■■■□□ 2.41
SPSB1-202ENST00000357898 IFT140Q96RY7 1462 aa30.11■■■□□ 2.41
SPSB1-202ENST00000357898 DNMBPQ6XZF7 1577 aa30.06■■■□□ 2.4
SPSB1-202ENST00000357898 OSCARQ8IYS5 282 aa30.05■■■□□ 2.4
SPSB1-202ENST00000357898 ZNF608Q9ULD9 1512 aaPredicted RBP30■■■□□ 2.39
SPSB1-202ENST00000357898 TRIM41Q8WV44 630 aa29.88■■■□□ 2.37
SPSB1-202ENST00000357898 POLA1P09884 1462 aaPredicted RBP29.85■■■□□ 2.37
SPSB1-202ENST00000357898 EIF4G3O43432 1585 aaKnown RBP29.83■■■□□ 2.37
SPSB1-202ENST00000357898 TARBP1Q13395 1621 aaKnown RBP29.82■■■□□ 2.36
SPSB1-202ENST00000357898 AQRO60306 1485 aaKnown RBP eCLIP29.81■■■□□ 2.36
SPSB1-202ENST00000357898 SOGA1O94964 1423 aa29.8■■■□□ 2.36
SPSB1-202ENST00000357898 RAD54L2Q9Y4B4 1467 aa29.77■■■□□ 2.36
SPSB1-202ENST00000357898 FGD5Q6ZNL6 1462 aa29.73■■■□□ 2.35
SPSB1-202ENST00000357898 CUX1P39880 1505 aa29.72■■■□□ 2.35
SPSB1-202ENST00000357898 FBLN2P98095 1184 aa29.7■■■□□ 2.34
SPSB1-202ENST00000357898 TDRD9Q8NDG6 1382 aaKnown RBP29.69■■■□□ 2.34
SPSB1-202ENST00000357898 CHD1O14646 1710 aa29.56■■■□□ 2.32
SPSB1-202ENST00000357898 WDR97A6NE52 1622 aa29.55■■■□□ 2.32
SPSB1-202ENST00000357898 RIMBP3CA6NJZ7 1639 aa29.51■■■□□ 2.31
SPSB1-202ENST00000357898 RIMBP3BA6NNM3 1639 aa29.51■■■□□ 2.31
SPSB1-202ENST00000357898 RIMBP3Q9UFD9 1639 aa29.51■■■□□ 2.31
SPSB1-202ENST00000357898 SNAPC4Q5SXM2 1469 aa29.5■■■□□ 2.31
SPSB1-202ENST00000357898 CHMP7Q8WUX9 453 aaPredicted RBP29.49■■■□□ 2.31
SPSB1-202ENST00000357898 GRIN2BQ13224 1484 aa29.47■■■□□ 2.31
SPSB1-202ENST00000357898 ARHGEF11O15085 1522 aa29.45■■■□□ 2.31
SPSB1-202ENST00000357898 MAGI1Q96QZ7 1491 aaPredicted RBP29.43■■■□□ 2.3
SPSB1-202ENST00000357898 GAPVD1Q14C86 1478 aa29.41■■■□□ 2.3
SPSB1-202ENST00000357898 WRNQ14191 1432 aaPredicted RBP eCLIP29.4■■■□□ 2.3
SPSB1-202ENST00000357898 ABCA10Q8WWZ4 1543 aa29.39■■■□□ 2.3
SPSB1-202ENST00000357898 CYB5RLQ6IPT4 315 aa29.35■■■□□ 2.29
SPSB1-202ENST00000357898 SYNJ2O15056 1496 aa29.33■■■□□ 2.29
SPSB1-202ENST00000357898 PBRM1Q86U86 1689 aa29.33■■■□□ 2.29
SPSB1-202ENST00000357898 TOP2BQ02880 1626 aa29.32■■■□□ 2.28
SPSB1-202ENST00000357898 BIVM-ERCC5R4GMW8 1640 aa29.3■■■□□ 2.28
SPSB1-202ENST00000357898 SYNJ1O43426 1573 aa29.29■■■□□ 2.28
SPSB1-202ENST00000357898 ABCA5Q8WWZ7 1642 aa29.28■■■□□ 2.28
SPSB1-202ENST00000357898 CLASP1Q7Z460 1538 aa29.2■■■□□ 2.26
SPSB1-202ENST00000357898 ARAP1Q96P48 1450 aa29.17■■■□□ 2.26
SPSB1-202ENST00000357898 GRIN2AQ12879 1464 aa29.07■■■□□ 2.24
SPSB1-202ENST00000357898 FHAD1B1AJZ9 1412 aa29.05■■■□□ 2.24
SPSB1-202ENST00000357898 ADAMTS12P58397 1594 aa29.05■■■□□ 2.24
SPSB1-202ENST00000357898 ERICH3Q5RHP9 1530 aa29.03■■■□□ 2.24
SPSB1-202ENST00000357898 TRHP20396 242 aaPredicted RBP28.98■■■□□ 2.23
SPSB1-202ENST00000357898 NUP160Q12769 1436 aa28.93■■■□□ 2.22
SPSB1-202ENST00000357898 CEP170Q5SW79 1584 aa28.92■■■□□ 2.22
SPSB1-202ENST00000357898 KIF27Q86VH2 1401 aa28.84■■■□□ 2.21
SPSB1-202ENST00000357898 ERCC6L2Q5T890 1561 aa28.78■■■□□ 2.2
SPSB1-202ENST00000357898 IGF1RP08069 1367 aa28.76■■■□□ 2.2
SPSB1-202ENST00000357898 JPH4Q96JJ6 628 aa28.76■■■□□ 2.19
SPSB1-202ENST00000357898 SHROOM2Q13796 1616 aa28.74■■■□□ 2.19
SPSB1-202ENST00000357898 PRG4Q92954 1404 aaPredicted RBP28.71■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms