RNA–Protein interactions for RNA: ENST00000357724.6

NTRK3-203, Transcript of neurotrophic receptor tyrosine kinase 3, humanhuman

TSL 5 BASIC

Gene NTRK3, Length 2,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NTRK3-203ENST00000357724 NISCHQ9Y2I1 1504 aa29.85■■■□□ 2.37
NTRK3-203ENST00000357724 SHROOM4Q9ULL8 1493 aa26.25■■□□□ 1.79
NTRK3-203ENST00000357724 HRCP23327 699 aa26.24■■□□□ 1.79
NTRK3-203ENST00000357724 SUPT5HO00267 1087 aaKnown RBP26.1■■□□□ 1.77
NTRK3-203ENST00000357724 MYO15BQ96JP2 1530 aa25.81■■□□□ 1.72
NTRK3-203ENST00000357724 PCGF6Q9BYE7 350 aa25.76■■□□□ 1.71
NTRK3-203ENST00000357724 PPARGC1BQ86YN6 1023 aaKnown RBP25.67■■□□□ 1.7
NTRK3-203ENST00000357724 CHIC1Q5VXU3 224 aa25.65■■□□□ 1.7
NTRK3-203ENST00000357724 CCDC180Q9P1Z9 1646 aa25.4■■□□□ 1.66
NTRK3-203ENST00000357724 ZCCHC6Q5VYS8 1495 aaKnown RBP25.39■■□□□ 1.66
NTRK3-203ENST00000357724 DCAF1Q9Y4B6 1507 aa25.27■■□□□ 1.64
NTRK3-203ENST00000357724 PELP1Q8IZL8 1130 aaKnown RBP25.11■■□□□ 1.61
NTRK3-203ENST00000357724 LOC105371045A0A1W2PR82 267 aa25.02■■□□□ 1.6
NTRK3-203ENST00000357724 TRIM26Q12899 539 aaPredicted RBP24.99■■□□□ 1.59
NTRK3-203ENST00000357724 DCAF8L2P0C7V8 631 aa24.77■■□□□ 1.56
NTRK3-203ENST00000357724 ZEB1P37275 1124 aaPredicted RBP24.76■■□□□ 1.55
NTRK3-203ENST00000357724 SCAF1Q9H7N4 1312 aaKnown RBP24.73■■□□□ 1.55
NTRK3-203ENST00000357724 ACIN1Q9UKV3 1341 aaKnown RBP24.18■■□□□ 1.46
NTRK3-203ENST00000357724 TRIM41Q8WV44 630 aa24.18■■□□□ 1.46
NTRK3-203ENST00000357724 ABCC9O60706 1549 aa24.13■■□□□ 1.45
NTRK3-203ENST00000357724 FAM9AQ8IZU1 332 aaPredicted RBP24.12■■□□□ 1.45
NTRK3-203ENST00000357724 NEUROD1Q13562 356 aa24.11■■□□□ 1.45
NTRK3-203ENST00000357724 MYT1Q01538 1121 aa24.09■■□□□ 1.45
NTRK3-203ENST00000357724 EHMT2Q96KQ7 1210 aa24■■□□□ 1.43
NTRK3-203ENST00000357724 GTF3C3Q9Y5Q9 886 aa23.97■■□□□ 1.43
NTRK3-203ENST00000357724 RSF1Q96T23 1441 aaPredicted RBP23.96■■□□□ 1.43
NTRK3-203ENST00000357724 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.93■■□□□ 1.42
NTRK3-203ENST00000357724 CENPBP07199 599 aaPredicted RBP23.92■■□□□ 1.42
NTRK3-203ENST00000357724 CCER1Q8TC90 406 aaPredicted RBP23.9■■□□□ 1.42
NTRK3-203ENST00000357724 RB1CC1Q8TDY2 1594 aa23.89■■□□□ 1.41
NTRK3-203ENST00000357724 DIEXFQ68CQ4 756 aaKnown RBP23.86■■□□□ 1.41
NTRK3-203ENST00000357724 SCRIBQ14160 1630 aa23.68■■□□□ 1.38
NTRK3-203ENST00000357724 NACADO15069 1562 aa23.55■■□□□ 1.36
NTRK3-203ENST00000357724 YTHDC1Q96MU7 727 aaKnown RBP23.44■■□□□ 1.34
NTRK3-203ENST00000357724 ZNF316A6NFI3 1004 aaPredicted RBP23.43■■□□□ 1.34
NTRK3-203ENST00000357724 TTBK1Q5TCY1 1321 aaPredicted RBP23.42■■□□□ 1.34
NTRK3-203ENST00000357724 WRNQ14191 1432 aaPredicted RBP eCLIP23.34■■□□□ 1.33
NTRK3-203ENST00000357724 CECR2Q9BXF3 1484 aa23.32■■□□□ 1.32
NTRK3-203ENST00000357724 MROH2BQ7Z745 1585 aa23.3■■□□□ 1.32
NTRK3-203ENST00000357724 WIZO95785 1651 aa23.25■■□□□ 1.31
NTRK3-203ENST00000357724 MIER1Q8N108 512 aa23.24■■□□□ 1.31
NTRK3-203ENST00000357724 CEP162Q5TB80 1403 aa23.23■■□□□ 1.31
NTRK3-203ENST00000357724 EIF4G1Q04637 1599 aaKnown RBP23.19■■□□□ 1.3
NTRK3-203ENST00000357724 BAZ1AQ9NRL2 1556 aaPredicted RBP23.1■■□□□ 1.29
NTRK3-203ENST00000357724 TNIKQ9UKE5 1360 aa23.07■■□□□ 1.28
NTRK3-203ENST00000357724 CCDC88BA6NC98 1476 aa23.07■■□□□ 1.28
NTRK3-203ENST00000357724 ABCC8Q09428 1581 aa23.05■■□□□ 1.28
NTRK3-203ENST00000357724 SOGA1O94964 1423 aa22.98■■□□□ 1.27
NTRK3-203ENST00000357724 UBTFP17480 764 aaKnown RBP22.95■■□□□ 1.26
NTRK3-203ENST00000357724 HNRNPUL2Q1KMD3 747 aaKnown RBP22.94■■□□□ 1.26
NTRK3-203ENST00000357724 CSRNP3Q8WYN3 585 aa22.89■■□□□ 1.25
NTRK3-203ENST00000357724 CLSPNQ9HAW4 1339 aa22.87■■□□□ 1.25
NTRK3-203ENST00000357724 SUPT16HQ9Y5B9 1047 aaKnown RBP22.86■■□□□ 1.25
NTRK3-203ENST00000357724 EEA1Q15075 1411 aa22.86■■□□□ 1.25
NTRK3-203ENST00000357724 UNC13AQ9UPW8 1703 aa22.84■■□□□ 1.25
NTRK3-203ENST00000357724 RUSC2Q8N2Y8 1516 aa22.83■■□□□ 1.25
NTRK3-203ENST00000357724 GOLGA3Q08378 1498 aa22.82■■□□□ 1.24
NTRK3-203ENST00000357724 TOP2AP11388 1531 aaKnown RBP22.8■■□□□ 1.24
NTRK3-203ENST00000357724 SMARCA2P51531 1590 aa22.73■■□□□ 1.23
NTRK3-203ENST00000357724 TSHZ2Q9NRE2 1034 aa22.71■■□□□ 1.23
NTRK3-203ENST00000357724 ANP32EQ9BTT0 268 aa22.71■■□□□ 1.23
NTRK3-203ENST00000357724 CLIP1P30622 1438 aa22.62■■□□□ 1.21
NTRK3-203ENST00000357724 VPS8Q8N3P4 1428 aa22.6■■□□□ 1.21
NTRK3-203ENST00000357724 CEP164Q9UPV0 1460 aa22.59■■□□□ 1.21
NTRK3-203ENST00000357724 APLP2Q06481 763 aa22.59■■□□□ 1.21
NTRK3-203ENST00000357724 SMARCA4P51532 1647 aa22.58■■□□□ 1.21
NTRK3-203ENST00000357724 BICRAQ9NZM4 1560 aa22.55■■□□□ 1.2
NTRK3-203ENST00000357724 KIF21BO75037 1637 aa22.54■■□□□ 1.2
NTRK3-203ENST00000357724 BCL11AQ9H165 835 aa22.54■■□□□ 1.2
NTRK3-203ENST00000357724 DHX57Q6P158 1386 aaKnown RBP22.52■■□□□ 1.2
NTRK3-203ENST00000357724 RANGAP1P46060 587 aaPredicted RBP22.41■■□□□ 1.18
NTRK3-203ENST00000357724 BAZ1BQ9UIG0 1483 aaKnown RBP22.41■■□□□ 1.18
NTRK3-203ENST00000357724 SYNJ1O43426 1573 aa22.38■■□□□ 1.17
NTRK3-203ENST00000357724 BCANQ96GW7 911 aa22.38■■□□□ 1.17
NTRK3-203ENST00000357724 RAPGEF2Q9Y4G8 1499 aa22.36■■□□□ 1.17
NTRK3-203ENST00000357724 KCNH8Q96L42 1107 aa22.35■■□□□ 1.17
NTRK3-203ENST00000357724 FKBP8Q14318 412 aa22.29■■□□□ 1.16
NTRK3-203ENST00000357724 PABPN1Q86U42 306 aaKnown RBP eCLIP22.28■■□□□ 1.16
NTRK3-203ENST00000357724 KANK4Q5T7N3 995 aaPredicted RBP22.2■■□□□ 1.14
NTRK3-203ENST00000357724 RBM19Q9Y4C8 960 aaKnown RBP22.2■■□□□ 1.14
NTRK3-203ENST00000357724 RRBP1Q9P2E9 1410 aaKnown RBP22.17■■□□□ 1.14
NTRK3-203ENST00000357724 PEG3Q9GZU2 1588 aa22.16■■□□□ 1.14
NTRK3-203ENST00000357724 CUX2O14529 1486 aa22.16■■□□□ 1.14
NTRK3-203ENST00000357724 ARAP1Q96P48 1450 aa22.15■■□□□ 1.14
NTRK3-203ENST00000357724 NEFLP07196 543 aa22.13■■□□□ 1.13
NTRK3-203ENST00000357724 DDX10Q13206 875 aaKnown RBP22.08■■□□□ 1.12
NTRK3-203ENST00000357724 CCNB3Q8WWL7 1395 aa22.07■■□□□ 1.12
NTRK3-203ENST00000357724 ITGAEP38570 1179 aa22.07■■□□□ 1.12
NTRK3-203ENST00000357724 MAPKBP1O60336 1514 aa22.04■■□□□ 1.12
NTRK3-203ENST00000357724 ERICH3Q5RHP9 1530 aa22.03■■□□□ 1.12
NTRK3-203ENST00000357724 RAB3GAP2Q9H2M9 1393 aa22.01■■□□□ 1.11
NTRK3-203ENST00000357724 TRIM52Q96A61 297 aa21.99■■□□□ 1.11
NTRK3-203ENST00000357724 TOP2BQ02880 1626 aa21.98■■□□□ 1.11
NTRK3-203ENST00000357724 PRXQ9BXM0 1461 aa21.98■■□□□ 1.11
NTRK3-203ENST00000357724 MSH5O43196 834 aa21.97■■□□□ 1.11
NTRK3-203ENST00000357724 WDR97A6NE52 1622 aa21.96■■□□□ 1.11
NTRK3-203ENST00000357724 PPP1R15AO75807 674 aaPredicted RBP21.95■■□□□ 1.1
NTRK3-203ENST00000357724 ATAD2BQ9ULI0 1458 aa21.93■■□□□ 1.1
NTRK3-203ENST00000357724 CCER2I3L3R5 266 aa21.91■■□□□ 1.1
NTRK3-203ENST00000357724 ANP32CO43423 234 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms