RNA–Protein interactions for RNA: ENST00000357383.4

CGB3-201, Transcript of chorionic gonadotropin subunit beta 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CGB3, Length 877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGB3-201ENST00000357383 NISCHQ9Y2I1 1504 aa40.43■■■■■ 4.06
CGB3-201ENST00000357383 CCDC180Q9P1Z9 1646 aa35.99■■■■□ 3.35
CGB3-201ENST00000357383 ABCC9O60706 1549 aa35.54■■■■□ 3.28
CGB3-201ENST00000357383 RB1CC1Q8TDY2 1594 aa34.01■■■■□ 3.03
CGB3-201ENST00000357383 DCAF8L2P0C7V8 631 aa33.97■■■■□ 3.03
CGB3-201ENST00000357383 NACADO15069 1562 aa33.89■■■■□ 3.02
CGB3-201ENST00000357383 ZCCHC6Q5VYS8 1495 aaKnown RBP33.64■■■□□ 2.98
CGB3-201ENST00000357383 MYO15BQ96JP2 1530 aa33.58■■■□□ 2.97
CGB3-201ENST00000357383 DCAF1Q9Y4B6 1507 aa33.38■■■□□ 2.93
CGB3-201ENST00000357383 UNC13AQ9UPW8 1703 aa33.25■■■□□ 2.91
CGB3-201ENST00000357383 PABPN1Q86U42 306 aaKnown RBP eCLIP33.2■■■□□ 2.91
CGB3-201ENST00000357383 BICRAQ9NZM4 1560 aa33.02■■■□□ 2.88
CGB3-201ENST00000357383 SCRIBQ14160 1630 aa32.94■■■□□ 2.86
CGB3-201ENST00000357383 DNAJC5BQ9UF47 199 aa32.82■■■□□ 2.84
CGB3-201ENST00000357383 SHROOM4Q9ULL8 1493 aa32.56■■■□□ 2.8
CGB3-201ENST00000357383 EIF4G1Q04637 1599 aaKnown RBP32.17■■■□□ 2.74
CGB3-201ENST00000357383 CC2D2AQ9P2K1 1620 aa32.1■■■□□ 2.73
CGB3-201ENST00000357383 CECR2Q9BXF3 1484 aa31.92■■■□□ 2.7
CGB3-201ENST00000357383 SMARCA4P51532 1647 aa31.42■■■□□ 2.62
CGB3-201ENST00000357383 BAZ1AQ9NRL2 1556 aaPredicted RBP31.34■■■□□ 2.61
CGB3-201ENST00000357383 ATAD2BQ9ULI0 1458 aa31.31■■■□□ 2.6
CGB3-201ENST00000357383 NCAPD3P42695 1498 aa31.29■■■□□ 2.6
CGB3-201ENST00000357383 SMARCA2P51531 1590 aa31.23■■■□□ 2.59
CGB3-201ENST00000357383 MROH2BQ7Z745 1585 aa31.2■■■□□ 2.58
CGB3-201ENST00000357383 HMGXB3Q12766 1538 aa31.12■■■□□ 2.57
CGB3-201ENST00000357383 PEG3Q9GZU2 1588 aa31.07■■■□□ 2.56
CGB3-201ENST00000357383 BAZ1BQ9UIG0 1483 aaKnown RBP31.06■■■□□ 2.56
CGB3-201ENST00000357383 WIZO95785 1651 aa30.85■■■□□ 2.53
CGB3-201ENST00000357383 RSF1Q96T23 1441 aaPredicted RBP30.75■■■□□ 2.51
CGB3-201ENST00000357383 NESP48681 1621 aa30.7■■■□□ 2.51
CGB3-201ENST00000357383 ERCC6Q03468 1493 aa30.63■■■□□ 2.49
CGB3-201ENST00000357383 LAMC3Q9Y6N6 1575 aa30.5■■■□□ 2.47
CGB3-201ENST00000357383 TOP2AP11388 1531 aaKnown RBP30.47■■■□□ 2.47
CGB3-201ENST00000357383 CADPSQ9ULU8 1353 aa30.4■■■□□ 2.46
CGB3-201ENST00000357383 CUX2O14529 1486 aa30.32■■■□□ 2.44
CGB3-201ENST00000357383 PDS5BQ9NTI5 1447 aa30.32■■■□□ 2.44
CGB3-201ENST00000357383 KIF21AQ7Z4S6 1674 aa30.29■■■□□ 2.44
CGB3-201ENST00000357383 THOC2Q8NI27 1593 aaKnown RBP30.23■■■□□ 2.43
CGB3-201ENST00000357383 CFTRP13569 1480 aa30.17■■■□□ 2.42
CGB3-201ENST00000357383 CCDC88BA6NC98 1476 aa30.13■■■□□ 2.41
CGB3-201ENST00000357383 FANCD2Q9BXW9 1451 aa30.07■■■□□ 2.4
CGB3-201ENST00000357383 MRC2Q9UBG0 1479 aa30.05■■■□□ 2.4
CGB3-201ENST00000357383 CEP164Q9UPV0 1460 aa30.05■■■□□ 2.4
CGB3-201ENST00000357383 WDR62O43379 1518 aa29.94■■■□□ 2.38
CGB3-201ENST00000357383 SUPT5HO00267 1087 aaKnown RBP29.89■■■□□ 2.38
CGB3-201ENST00000357383 PRDM2Q13029 1718 aa29.88■■■□□ 2.37
CGB3-201ENST00000357383 URB2Q14146 1524 aaKnown RBP29.8■■■□□ 2.36
CGB3-201ENST00000357383 DNAJC5Q9H3Z4 198 aa29.67■■■□□ 2.34
CGB3-201ENST00000357383 TOPBP1Q92547 1522 aa29.56■■■□□ 2.32
CGB3-201ENST00000357383 DNMBPQ6XZF7 1577 aa29.49■■■□□ 2.31
CGB3-201ENST00000357383 ABCC8Q09428 1581 aa29.47■■■□□ 2.31
CGB3-201ENST00000357383 IFT140Q96RY7 1462 aa29.41■■■□□ 2.3
CGB3-201ENST00000357383 ZNF608Q9ULD9 1512 aaPredicted RBP29.35■■■□□ 2.29
CGB3-201ENST00000357383 POLA1P09884 1462 aaPredicted RBP29.3■■■□□ 2.28
CGB3-201ENST00000357383 CUX1P39880 1505 aa29.28■■■□□ 2.28
CGB3-201ENST00000357383 TARBP1Q13395 1621 aaKnown RBP29.24■■■□□ 2.27
CGB3-201ENST00000357383 FGD5Q6ZNL6 1462 aa29.22■■■□□ 2.27
CGB3-201ENST00000357383 RAD54L2Q9Y4B4 1467 aa29.21■■■□□ 2.27
CGB3-201ENST00000357383 EIF4G3O43432 1585 aaKnown RBP29.2■■■□□ 2.26
CGB3-201ENST00000357383 SOGA1O94964 1423 aa29.17■■■□□ 2.26
CGB3-201ENST00000357383 AQRO60306 1485 aaKnown RBP eCLIP29.16■■■□□ 2.26
CGB3-201ENST00000357383 TDRD9Q8NDG6 1382 aaKnown RBP29.08■■■□□ 2.25
CGB3-201ENST00000357383 OSCARQ8IYS5 282 aa29.06■■■□□ 2.24
CGB3-201ENST00000357383 WRNQ14191 1432 aaPredicted RBP eCLIP29■■■□□ 2.23
CGB3-201ENST00000357383 SYNJ1O43426 1573 aa28.96■■■□□ 2.23
CGB3-201ENST00000357383 WDR97A6NE52 1622 aa28.94■■■□□ 2.22
CGB3-201ENST00000357383 TOP2BQ02880 1626 aa28.94■■■□□ 2.22
CGB3-201ENST00000357383 BIVM-ERCC5R4GMW8 1640 aa28.92■■■□□ 2.22
CGB3-201ENST00000357383 FBLN2P98095 1184 aa28.88■■■□□ 2.21
CGB3-201ENST00000357383 SNAPC4Q5SXM2 1469 aa28.88■■■□□ 2.21
CGB3-201ENST00000357383 ABCA10Q8WWZ4 1543 aa28.88■■■□□ 2.21
CGB3-201ENST00000357383 CHD1O14646 1710 aa28.87■■■□□ 2.21
CGB3-201ENST00000357383 GRIN2BQ13224 1484 aa28.85■■■□□ 2.21
CGB3-201ENST00000357383 GAPVD1Q14C86 1478 aa28.83■■■□□ 2.21
CGB3-201ENST00000357383 ABCA5Q8WWZ7 1642 aa28.8■■■□□ 2.2
CGB3-201ENST00000357383 MAGI1Q96QZ7 1491 aaPredicted RBP28.78■■■□□ 2.2
CGB3-201ENST00000357383 PBRM1Q86U86 1689 aa28.77■■■□□ 2.2
CGB3-201ENST00000357383 CHMP7Q8WUX9 453 aaPredicted RBP28.72■■■□□ 2.19
CGB3-201ENST00000357383 TRIM41Q8WV44 630 aa28.7■■■□□ 2.18
CGB3-201ENST00000357383 SYNJ2O15056 1496 aa28.68■■■□□ 2.18
CGB3-201ENST00000357383 RIMBP3CA6NJZ7 1639 aa28.64■■■□□ 2.18
CGB3-201ENST00000357383 RIMBP3BA6NNM3 1639 aa28.64■■■□□ 2.18
CGB3-201ENST00000357383 RIMBP3Q9UFD9 1639 aa28.64■■■□□ 2.18
CGB3-201ENST00000357383 ARHGEF11O15085 1522 aa28.61■■■□□ 2.17
CGB3-201ENST00000357383 ADAMTS12P58397 1594 aa28.55■■■□□ 2.16
CGB3-201ENST00000357383 CLASP1Q7Z460 1538 aa28.53■■■□□ 2.16
CGB3-201ENST00000357383 ERICH3Q5RHP9 1530 aa28.52■■■□□ 2.16
CGB3-201ENST00000357383 GRIN2AQ12879 1464 aa28.48■■■□□ 2.15
CGB3-201ENST00000357383 FHAD1B1AJZ9 1412 aa28.47■■■□□ 2.15
CGB3-201ENST00000357383 KIF27Q86VH2 1401 aa28.39■■■□□ 2.14
CGB3-201ENST00000357383 CYB5RLQ6IPT4 315 aa28.38■■■□□ 2.13
CGB3-201ENST00000357383 ARAP1Q96P48 1450 aa28.38■■■□□ 2.13
CGB3-201ENST00000357383 CEP170Q5SW79 1584 aa28.37■■■□□ 2.13
CGB3-201ENST00000357383 NUP160Q12769 1436 aa28.35■■■□□ 2.13
CGB3-201ENST00000357383 IGF1RP08069 1367 aa28.31■■■□□ 2.12
CGB3-201ENST00000357383 CUL7Q14999 1698 aa28.22■■■□□ 2.11
CGB3-201ENST00000357383 ERCC6L2Q5T890 1561 aa28.19■■■□□ 2.1
CGB3-201ENST00000357383 SHROOM2Q13796 1616 aa28.14■■■□□ 2.1
CGB3-201ENST00000357383 CARMIL1Q5VZK9 1371 aa28.14■■■□□ 2.1
CGB3-201ENST00000357383 RUSC2Q8N2Y8 1516 aa28.13■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms