RNA–Protein interactions for RNA: ENST00000357028.6

MED27-202, Transcript of mediator complex subunit 27, humanhuman

TSL 1 (best) BASIC

Gene MED27, Length 1,281 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED27-202ENST00000357028 NISCHQ9Y2I1 1504 aa31.32■■■□□ 2.6
MED27-202ENST00000357028 CCDC180Q9P1Z9 1646 aa27.87■■■□□ 2.05
MED27-202ENST00000357028 ABCC9O60706 1549 aa27.48■■□□□ 1.99
MED27-202ENST00000357028 RB1CC1Q8TDY2 1594 aa26.37■■□□□ 1.81
MED27-202ENST00000357028 NACADO15069 1562 aa26.33■■□□□ 1.8
MED27-202ENST00000357028 DCAF8L2P0C7V8 631 aa26.26■■□□□ 1.79
MED27-202ENST00000357028 MYO15BQ96JP2 1530 aa26.16■■□□□ 1.78
MED27-202ENST00000357028 ZCCHC6Q5VYS8 1495 aaKnown RBP26.01■■□□□ 1.75
MED27-202ENST00000357028 DCAF1Q9Y4B6 1507 aa25.94■■□□□ 1.74
MED27-202ENST00000357028 PABPN1Q86U42 306 aaKnown RBP eCLIP25.71■■□□□ 1.71
MED27-202ENST00000357028 UNC13AQ9UPW8 1703 aa25.69■■□□□ 1.7
MED27-202ENST00000357028 BICRAQ9NZM4 1560 aa25.58■■□□□ 1.69
MED27-202ENST00000357028 DNAJC5BQ9UF47 199 aa25.54■■□□□ 1.68
MED27-202ENST00000357028 SCRIBQ14160 1630 aa25.36■■□□□ 1.65
MED27-202ENST00000357028 SHROOM4Q9ULL8 1493 aa25.34■■□□□ 1.65
MED27-202ENST00000357028 EIF4G1Q04637 1599 aaKnown RBP24.91■■□□□ 1.58
MED27-202ENST00000357028 CC2D2AQ9P2K1 1620 aa24.85■■□□□ 1.57
MED27-202ENST00000357028 CECR2Q9BXF3 1484 aa24.76■■□□□ 1.55
MED27-202ENST00000357028 NCAPD3P42695 1498 aa24.34■■□□□ 1.49
MED27-202ENST00000357028 SMARCA4P51532 1647 aa24.29■■□□□ 1.48
MED27-202ENST00000357028 ATAD2BQ9ULI0 1458 aa24.27■■□□□ 1.48
MED27-202ENST00000357028 BAZ1AQ9NRL2 1556 aaPredicted RBP24.26■■□□□ 1.47
MED27-202ENST00000357028 SMARCA2P51531 1590 aa24.21■■□□□ 1.47
MED27-202ENST00000357028 HMGXB3Q12766 1538 aa24.13■■□□□ 1.45
MED27-202ENST00000357028 PEG3Q9GZU2 1588 aa24.12■■□□□ 1.45
MED27-202ENST00000357028 MROH2BQ7Z745 1585 aa24.1■■□□□ 1.45
MED27-202ENST00000357028 BAZ1BQ9UIG0 1483 aaKnown RBP24.02■■□□□ 1.44
MED27-202ENST00000357028 RSF1Q96T23 1441 aaPredicted RBP23.8■■□□□ 1.4
MED27-202ENST00000357028 WIZO95785 1651 aa23.79■■□□□ 1.4
MED27-202ENST00000357028 NESP48681 1621 aa23.73■■□□□ 1.39
MED27-202ENST00000357028 ERCC6Q03468 1493 aa23.71■■□□□ 1.39
MED27-202ENST00000357028 LAMC3Q9Y6N6 1575 aa23.66■■□□□ 1.38
MED27-202ENST00000357028 CADPSQ9ULU8 1353 aa23.62■■□□□ 1.37
MED27-202ENST00000357028 CUX2O14529 1486 aa23.59■■□□□ 1.37
MED27-202ENST00000357028 PDS5BQ9NTI5 1447 aa23.56■■□□□ 1.36
MED27-202ENST00000357028 TOP2AP11388 1531 aaKnown RBP23.54■■□□□ 1.36
MED27-202ENST00000357028 CFTRP13569 1480 aa23.41■■□□□ 1.34
MED27-202ENST00000357028 THOC2Q8NI27 1593 aaKnown RBP23.38■■□□□ 1.33
MED27-202ENST00000357028 KIF21AQ7Z4S6 1674 aa23.38■■□□□ 1.33
MED27-202ENST00000357028 CCDC88BA6NC98 1476 aa23.32■■□□□ 1.32
MED27-202ENST00000357028 FANCD2Q9BXW9 1451 aa23.28■■□□□ 1.32
MED27-202ENST00000357028 MRC2Q9UBG0 1479 aa23.28■■□□□ 1.32
MED27-202ENST00000357028 CEP164Q9UPV0 1460 aa23.25■■□□□ 1.31
MED27-202ENST00000357028 DNAJC5Q9H3Z4 198 aa23.21■■□□□ 1.31
MED27-202ENST00000357028 WDR62O43379 1518 aa23.2■■□□□ 1.3
MED27-202ENST00000357028 PRDM2Q13029 1718 aa23.08■■□□□ 1.28
MED27-202ENST00000357028 URB2Q14146 1524 aaKnown RBP23.05■■□□□ 1.28
MED27-202ENST00000357028 SUPT5HO00267 1087 aaKnown RBP23.01■■□□□ 1.27
MED27-202ENST00000357028 ABCC8Q09428 1581 aa22.93■■□□□ 1.26
MED27-202ENST00000357028 TOPBP1Q92547 1522 aa22.88■■□□□ 1.25
MED27-202ENST00000357028 DNMBPQ6XZF7 1577 aa22.81■■□□□ 1.24
MED27-202ENST00000357028 IFT140Q96RY7 1462 aa22.81■■□□□ 1.24
MED27-202ENST00000357028 ZNF608Q9ULD9 1512 aaPredicted RBP22.69■■□□□ 1.22
MED27-202ENST00000357028 POLA1P09884 1462 aaPredicted RBP22.67■■□□□ 1.22
MED27-202ENST00000357028 OSCARQ8IYS5 282 aa22.66■■□□□ 1.22
MED27-202ENST00000357028 TARBP1Q13395 1621 aaKnown RBP22.64■■□□□ 1.21
MED27-202ENST00000357028 SOGA1O94964 1423 aa22.62■■□□□ 1.21
MED27-202ENST00000357028 CUX1P39880 1505 aa22.62■■□□□ 1.21
MED27-202ENST00000357028 AQRO60306 1485 aaKnown RBP eCLIP22.57■■□□□ 1.2
MED27-202ENST00000357028 FGD5Q6ZNL6 1462 aa22.57■■□□□ 1.2
MED27-202ENST00000357028 RAD54L2Q9Y4B4 1467 aa22.57■■□□□ 1.2
MED27-202ENST00000357028 EIF4G3O43432 1585 aaKnown RBP22.53■■□□□ 1.2
MED27-202ENST00000357028 TDRD9Q8NDG6 1382 aaKnown RBP22.5■■□□□ 1.19
MED27-202ENST00000357028 WDR97A6NE52 1622 aa22.46■■□□□ 1.19
MED27-202ENST00000357028 WRNQ14191 1432 aaPredicted RBP eCLIP22.42■■□□□ 1.18
MED27-202ENST00000357028 ABCA10Q8WWZ4 1543 aa22.38■■□□□ 1.17
MED27-202ENST00000357028 TOP2BQ02880 1626 aa22.37■■□□□ 1.17
MED27-202ENST00000357028 GRIN2BQ13224 1484 aa22.36■■□□□ 1.17
MED27-202ENST00000357028 FBLN2P98095 1184 aa22.34■■□□□ 1.17
MED27-202ENST00000357028 BIVM-ERCC5R4GMW8 1640 aa22.34■■□□□ 1.17
MED27-202ENST00000357028 GAPVD1Q14C86 1478 aa22.34■■□□□ 1.17
MED27-202ENST00000357028 MAGI1Q96QZ7 1491 aaPredicted RBP22.32■■□□□ 1.16
MED27-202ENST00000357028 SYNJ1O43426 1573 aa22.31■■□□□ 1.16
MED27-202ENST00000357028 SNAPC4Q5SXM2 1469 aa22.3■■□□□ 1.16
MED27-202ENST00000357028 CHMP7Q8WUX9 453 aaPredicted RBP22.29■■□□□ 1.16
MED27-202ENST00000357028 CHD1O14646 1710 aa22.28■■□□□ 1.16
MED27-202ENST00000357028 ABCA5Q8WWZ7 1642 aa22.24■■□□□ 1.15
MED27-202ENST00000357028 SYNJ2O15056 1496 aa22.23■■□□□ 1.15
MED27-202ENST00000357028 TRIM41Q8WV44 630 aa22.23■■□□□ 1.15
MED27-202ENST00000357028 PBRM1Q86U86 1689 aa22.18■■□□□ 1.14
MED27-202ENST00000357028 RIMBP3CA6NJZ7 1639 aa22.17■■□□□ 1.14
MED27-202ENST00000357028 RIMBP3BA6NNM3 1639 aa22.17■■□□□ 1.14
MED27-202ENST00000357028 RIMBP3Q9UFD9 1639 aa22.17■■□□□ 1.14
MED27-202ENST00000357028 ARHGEF11O15085 1522 aa22.16■■□□□ 1.14
MED27-202ENST00000357028 ERICH3Q5RHP9 1530 aa22.11■■□□□ 1.13
MED27-202ENST00000357028 CLASP1Q7Z460 1538 aa22.1■■□□□ 1.13
MED27-202ENST00000357028 FHAD1B1AJZ9 1412 aa22.08■■□□□ 1.13
MED27-202ENST00000357028 GRIN2AQ12879 1464 aa22.05■■□□□ 1.12
MED27-202ENST00000357028 CYB5RLQ6IPT4 315 aa22.05■■□□□ 1.12
MED27-202ENST00000357028 ADAMTS12P58397 1594 aa22.03■■□□□ 1.12
MED27-202ENST00000357028 NUP160Q12769 1436 aa21.99■■□□□ 1.11
MED27-202ENST00000357028 IGF1RP08069 1367 aa21.99■■□□□ 1.11
MED27-202ENST00000357028 KIF27Q86VH2 1401 aa21.98■■□□□ 1.11
MED27-202ENST00000357028 ARAP1Q96P48 1450 aa21.97■■□□□ 1.11
MED27-202ENST00000357028 CEP170Q5SW79 1584 aa21.91■■□□□ 1.1
MED27-202ENST00000357028 JPH4Q96JJ6 628 aa21.83■■□□□ 1.09
MED27-202ENST00000357028 CARMIL1Q5VZK9 1371 aa21.82■■□□□ 1.08
MED27-202ENST00000357028 SHROOM2Q13796 1616 aa21.8■■□□□ 1.08
MED27-202ENST00000357028 CUL7Q14999 1698 aa21.8■■□□□ 1.08
MED27-202ENST00000357028 KIAA0586Q9BVV6 1533 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms