RNA–Protein interactions for RNA: ENST00000355254.6

NTRK3-202, Transcript of neurotrophic receptor tyrosine kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NTRK3, Length 2,938 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NTRK3-202ENST00000355254 NISCHQ9Y2I1 1504 aa30.55■■■□□ 2.48
NTRK3-202ENST00000355254 SHROOM4Q9ULL8 1493 aa26.76■■□□□ 1.87
NTRK3-202ENST00000355254 HRCP23327 699 aa26.75■■□□□ 1.87
NTRK3-202ENST00000355254 SUPT5HO00267 1087 aaKnown RBP26.61■■□□□ 1.85
NTRK3-202ENST00000355254 MYO15BQ96JP2 1530 aa26.3■■□□□ 1.8
NTRK3-202ENST00000355254 PCGF6Q9BYE7 350 aa26.23■■□□□ 1.79
NTRK3-202ENST00000355254 CHIC1Q5VXU3 224 aa26.19■■□□□ 1.78
NTRK3-202ENST00000355254 PPARGC1BQ86YN6 1023 aaKnown RBP26.09■■□□□ 1.77
NTRK3-202ENST00000355254 ZCCHC6Q5VYS8 1495 aaKnown RBP25.98■■□□□ 1.75
NTRK3-202ENST00000355254 DCAF1Q9Y4B6 1507 aa25.81■■□□□ 1.72
NTRK3-202ENST00000355254 PELP1Q8IZL8 1130 aaKnown RBP25.62■■□□□ 1.69
NTRK3-202ENST00000355254 CCDC180Q9P1Z9 1646 aa25.54■■□□□ 1.68
NTRK3-202ENST00000355254 TRIM26Q12899 539 aaPredicted RBP25.51■■□□□ 1.67
NTRK3-202ENST00000355254 LOC105371045A0A1W2PR82 267 aa25.5■■□□□ 1.67
NTRK3-202ENST00000355254 ZEB1P37275 1124 aaPredicted RBP25.3■■□□□ 1.64
NTRK3-202ENST00000355254 DCAF8L2P0C7V8 631 aa25.28■■□□□ 1.64
NTRK3-202ENST00000355254 SCAF1Q9H7N4 1312 aaKnown RBP25.16■■□□□ 1.62
NTRK3-202ENST00000355254 TRIM41Q8WV44 630 aa24.69■■□□□ 1.54
NTRK3-202ENST00000355254 ABCC9O60706 1549 aa24.68■■□□□ 1.54
NTRK3-202ENST00000355254 ACIN1Q9UKV3 1341 aaKnown RBP24.64■■□□□ 1.54
NTRK3-202ENST00000355254 MYT1Q01538 1121 aa24.59■■□□□ 1.53
NTRK3-202ENST00000355254 FAM9AQ8IZU1 332 aaPredicted RBP24.58■■□□□ 1.52
NTRK3-202ENST00000355254 NEUROD1Q13562 356 aa24.54■■□□□ 1.52
NTRK3-202ENST00000355254 RSF1Q96T23 1441 aaPredicted RBP24.5■■□□□ 1.51
NTRK3-202ENST00000355254 CENPBP07199 599 aaPredicted RBP24.4■■□□□ 1.5
NTRK3-202ENST00000355254 EHMT2Q96KQ7 1210 aa24.4■■□□□ 1.5
NTRK3-202ENST00000355254 GTF3C3Q9Y5Q9 886 aa24.4■■□□□ 1.5
NTRK3-202ENST00000355254 RB1CC1Q8TDY2 1594 aa24.38■■□□□ 1.49
NTRK3-202ENST00000355254 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.37■■□□□ 1.49
NTRK3-202ENST00000355254 CCER1Q8TC90 406 aaPredicted RBP24.36■■□□□ 1.49
NTRK3-202ENST00000355254 DIEXFQ68CQ4 756 aaKnown RBP24.32■■□□□ 1.48
NTRK3-202ENST00000355254 SCRIBQ14160 1630 aa24.19■■□□□ 1.46
NTRK3-202ENST00000355254 ZNF316A6NFI3 1004 aaPredicted RBP23.91■■□□□ 1.42
NTRK3-202ENST00000355254 WRNQ14191 1432 aaPredicted RBP eCLIP23.87■■□□□ 1.41
NTRK3-202ENST00000355254 YTHDC1Q96MU7 727 aaKnown RBP23.83■■□□□ 1.41
NTRK3-202ENST00000355254 CECR2Q9BXF3 1484 aa23.83■■□□□ 1.41
NTRK3-202ENST00000355254 MROH2BQ7Z745 1585 aa23.82■■□□□ 1.4
NTRK3-202ENST00000355254 TTBK1Q5TCY1 1321 aaPredicted RBP23.82■■□□□ 1.4
NTRK3-202ENST00000355254 WIZO95785 1651 aa23.75■■□□□ 1.39
NTRK3-202ENST00000355254 CEP162Q5TB80 1403 aa23.72■■□□□ 1.39
NTRK3-202ENST00000355254 EIF4G1Q04637 1599 aaKnown RBP23.71■■□□□ 1.39
NTRK3-202ENST00000355254 MIER1Q8N108 512 aa23.68■■□□□ 1.38
NTRK3-202ENST00000355254 BAZ1AQ9NRL2 1556 aaPredicted RBP23.63■■□□□ 1.37
NTRK3-202ENST00000355254 TNIKQ9UKE5 1360 aa23.6■■□□□ 1.37
NTRK3-202ENST00000355254 CCDC88BA6NC98 1476 aa23.55■■□□□ 1.36
NTRK3-202ENST00000355254 ABCC8Q09428 1581 aa23.52■■□□□ 1.36
NTRK3-202ENST00000355254 NACADO15069 1562 aa23.46■■□□□ 1.35
NTRK3-202ENST00000355254 SOGA1O94964 1423 aa23.46■■□□□ 1.35
NTRK3-202ENST00000355254 UBTFP17480 764 aaKnown RBP23.43■■□□□ 1.34
NTRK3-202ENST00000355254 EEA1Q15075 1411 aa23.42■■□□□ 1.34
NTRK3-202ENST00000355254 CSRNP3Q8WYN3 585 aa23.39■■□□□ 1.34
NTRK3-202ENST00000355254 HNRNPUL2Q1KMD3 747 aaKnown RBP23.39■■□□□ 1.33
NTRK3-202ENST00000355254 CLSPNQ9HAW4 1339 aa23.38■■□□□ 1.33
NTRK3-202ENST00000355254 TOP2AP11388 1531 aaKnown RBP23.34■■□□□ 1.33
NTRK3-202ENST00000355254 GOLGA3Q08378 1498 aa23.33■■□□□ 1.32
NTRK3-202ENST00000355254 RUSC2Q8N2Y8 1516 aa23.3■■□□□ 1.32
NTRK3-202ENST00000355254 SUPT16HQ9Y5B9 1047 aaKnown RBP23.29■■□□□ 1.32
NTRK3-202ENST00000355254 SMARCA2P51531 1590 aa23.25■■□□□ 1.31
NTRK3-202ENST00000355254 TSHZ2Q9NRE2 1034 aa23.14■■□□□ 1.29
NTRK3-202ENST00000355254 ANP32EQ9BTT0 268 aa23.13■■□□□ 1.29
NTRK3-202ENST00000355254 CLIP1P30622 1438 aa23.11■■□□□ 1.29
NTRK3-202ENST00000355254 SMARCA4P51532 1647 aa23.11■■□□□ 1.29
NTRK3-202ENST00000355254 CEP164Q9UPV0 1460 aa23.1■■□□□ 1.29
NTRK3-202ENST00000355254 VPS8Q8N3P4 1428 aa23.1■■□□□ 1.29
NTRK3-202ENST00000355254 APLP2Q06481 763 aa23.09■■□□□ 1.29
NTRK3-202ENST00000355254 KIF21BO75037 1637 aa23.06■■□□□ 1.28
NTRK3-202ENST00000355254 DHX57Q6P158 1386 aaKnown RBP22.99■■□□□ 1.27
NTRK3-202ENST00000355254 BAZ1BQ9UIG0 1483 aaKnown RBP22.93■■□□□ 1.26
NTRK3-202ENST00000355254 BCL11AQ9H165 835 aa22.92■■□□□ 1.26
NTRK3-202ENST00000355254 SYNJ1O43426 1573 aa22.86■■□□□ 1.25
NTRK3-202ENST00000355254 RAPGEF2Q9Y4G8 1499 aa22.84■■□□□ 1.25
NTRK3-202ENST00000355254 RANGAP1P46060 587 aaPredicted RBP22.81■■□□□ 1.24
NTRK3-202ENST00000355254 BCANQ96GW7 911 aa22.75■■□□□ 1.23
NTRK3-202ENST00000355254 KCNH8Q96L42 1107 aa22.74■■□□□ 1.23
NTRK3-202ENST00000355254 FKBP8Q14318 412 aa22.71■■□□□ 1.23
NTRK3-202ENST00000355254 RRBP1Q9P2E9 1410 aaKnown RBP22.66■■□□□ 1.22
NTRK3-202ENST00000355254 CUX2O14529 1486 aa22.66■■□□□ 1.22
NTRK3-202ENST00000355254 KANK4Q5T7N3 995 aaPredicted RBP22.65■■□□□ 1.22
NTRK3-202ENST00000355254 UNC13AQ9UPW8 1703 aa22.65■■□□□ 1.22
NTRK3-202ENST00000355254 ARAP1Q96P48 1450 aa22.62■■□□□ 1.21
NTRK3-202ENST00000355254 RBM19Q9Y4C8 960 aaKnown RBP22.62■■□□□ 1.21
NTRK3-202ENST00000355254 NEFLP07196 543 aa22.58■■□□□ 1.21
NTRK3-202ENST00000355254 PEG3Q9GZU2 1588 aa22.57■■□□□ 1.2
NTRK3-202ENST00000355254 CCNB3Q8WWL7 1395 aa22.55■■□□□ 1.2
NTRK3-202ENST00000355254 ERICH3Q5RHP9 1530 aa22.55■■□□□ 1.2
NTRK3-202ENST00000355254 DDX10Q13206 875 aaKnown RBP22.51■■□□□ 1.19
NTRK3-202ENST00000355254 MAPKBP1O60336 1514 aa22.49■■□□□ 1.19
NTRK3-202ENST00000355254 TOP2BQ02880 1626 aa22.49■■□□□ 1.19
NTRK3-202ENST00000355254 PRXQ9BXM0 1461 aa22.49■■□□□ 1.19
NTRK3-202ENST00000355254 ITGAEP38570 1179 aa22.48■■□□□ 1.19
NTRK3-202ENST00000355254 RAB3GAP2Q9H2M9 1393 aa22.47■■□□□ 1.19
NTRK3-202ENST00000355254 WDR97A6NE52 1622 aa22.41■■□□□ 1.18
NTRK3-202ENST00000355254 PPP1R15AO75807 674 aaPredicted RBP22.41■■□□□ 1.18
NTRK3-202ENST00000355254 CCER2I3L3R5 266 aa22.39■■□□□ 1.18
NTRK3-202ENST00000355254 TRIM52Q96A61 297 aa22.39■■□□□ 1.18
NTRK3-202ENST00000355254 BIVM-ERCC5R4GMW8 1640 aa22.37■■□□□ 1.17
NTRK3-202ENST00000355254 MSH5O43196 834 aa22.36■■□□□ 1.17
NTRK3-202ENST00000355254 PABPN1Q86U42 306 aaKnown RBP eCLIP22.34■■□□□ 1.17
NTRK3-202ENST00000355254 ATAD2BQ9ULI0 1458 aa22.33■■□□□ 1.17
NTRK3-202ENST00000355254 SETD5Q9C0A6 1442 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms