RNA–Protein interactions for RNA: ENST00000354952.6

PLSCR4-201, Transcript of phospholipid scramblase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PLSCR4, Length 3,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLSCR4-201ENST00000354952 NISCHQ9Y2I1 1504 aa23.83■■□□□ 1.4
PLSCR4-201ENST00000354952 CCDC180Q9P1Z9 1646 aa21.31■■□□□ 1
PLSCR4-201ENST00000354952 ABCC9O60706 1549 aa20.2■□□□□ 0.82
PLSCR4-201ENST00000354952 MYO15BQ96JP2 1530 aa20.02■□□□□ 0.8
PLSCR4-201ENST00000354952 DCAF1Q9Y4B6 1507 aa19.96■□□□□ 0.79
PLSCR4-201ENST00000354952 ZCCHC6Q5VYS8 1495 aaKnown RBP19.93■□□□□ 0.78
PLSCR4-201ENST00000354952 NACADO15069 1562 aa19.91■□□□□ 0.78
PLSCR4-201ENST00000354952 RB1CC1Q8TDY2 1594 aa19.82■□□□□ 0.76
PLSCR4-201ENST00000354952 UNC13AQ9UPW8 1703 aa19.36■□□□□ 0.69
PLSCR4-201ENST00000354952 SHROOM4Q9ULL8 1493 aa19.29■□□□□ 0.68
PLSCR4-201ENST00000354952 DCAF8L2P0C7V8 631 aa19.25■□□□□ 0.67
PLSCR4-201ENST00000354952 BICRAQ9NZM4 1560 aa19.18■□□□□ 0.66
PLSCR4-201ENST00000354952 SCRIBQ14160 1630 aa19.1■□□□□ 0.65
PLSCR4-201ENST00000354952 PABPN1Q86U42 306 aaKnown RBP eCLIP18.76■□□□□ 0.59
PLSCR4-201ENST00000354952 EIF4G1Q04637 1599 aaKnown RBP18.62■□□□□ 0.57
PLSCR4-201ENST00000354952 BAZ1AQ9NRL2 1556 aaPredicted RBP18.49■□□□□ 0.55
PLSCR4-201ENST00000354952 CC2D2AQ9P2K1 1620 aa18.46■□□□□ 0.55
PLSCR4-201ENST00000354952 SMARCA4P51532 1647 aa18.46■□□□□ 0.55
PLSCR4-201ENST00000354952 PEG3Q9GZU2 1588 aa18.44■□□□□ 0.54
PLSCR4-201ENST00000354952 CECR2Q9BXF3 1484 aa18.36■□□□□ 0.53
PLSCR4-201ENST00000354952 SMARCA2P51531 1590 aa18.35■□□□□ 0.53
PLSCR4-201ENST00000354952 NCAPD3P42695 1498 aa18.31■□□□□ 0.52
PLSCR4-201ENST00000354952 HMGXB3Q12766 1538 aa18.31■□□□□ 0.52
PLSCR4-201ENST00000354952 DNAJC5BQ9UF47 199 aa18.29■□□□□ 0.52
PLSCR4-201ENST00000354952 ATAD2BQ9ULI0 1458 aa18.26■□□□□ 0.51
PLSCR4-201ENST00000354952 MROH2BQ7Z745 1585 aa18.26■□□□□ 0.51
PLSCR4-201ENST00000354952 RSF1Q96T23 1441 aaPredicted RBP18.14■□□□□ 0.49
PLSCR4-201ENST00000354952 BAZ1BQ9UIG0 1483 aaKnown RBP18.08■□□□□ 0.49
PLSCR4-201ENST00000354952 WIZO95785 1651 aa18.06■□□□□ 0.48
PLSCR4-201ENST00000354952 TOP2AP11388 1531 aaKnown RBP18.03■□□□□ 0.48
PLSCR4-201ENST00000354952 LAMC3Q9Y6N6 1575 aa17.83■□□□□ 0.44
PLSCR4-201ENST00000354952 PRDM2Q13029 1718 aa17.74■□□□□ 0.43
PLSCR4-201ENST00000354952 CCDC88BA6NC98 1476 aa17.69■□□□□ 0.42
PLSCR4-201ENST00000354952 CFTRP13569 1480 aa17.69■□□□□ 0.42
PLSCR4-201ENST00000354952 CADPSQ9ULU8 1353 aa17.68■□□□□ 0.42
PLSCR4-201ENST00000354952 PDS5BQ9NTI5 1447 aa17.59■□□□□ 0.41
PLSCR4-201ENST00000354952 NESP48681 1621 aa17.55■□□□□ 0.4
PLSCR4-201ENST00000354952 KIF21AQ7Z4S6 1674 aa17.51■□□□□ 0.39
PLSCR4-201ENST00000354952 THOC2Q8NI27 1593 aaKnown RBP17.5■□□□□ 0.39
PLSCR4-201ENST00000354952 FANCD2Q9BXW9 1451 aa17.45■□□□□ 0.38
PLSCR4-201ENST00000354952 CUX2O14529 1486 aa17.45■□□□□ 0.38
PLSCR4-201ENST00000354952 ERCC6Q03468 1493 aa17.44■□□□□ 0.38
PLSCR4-201ENST00000354952 CEP164Q9UPV0 1460 aa17.44■□□□□ 0.38
PLSCR4-201ENST00000354952 WDR62O43379 1518 aa17.43■□□□□ 0.38
PLSCR4-201ENST00000354952 SUPT5HO00267 1087 aaKnown RBP17.42■□□□□ 0.38
PLSCR4-201ENST00000354952 MRC2Q9UBG0 1479 aa17.42■□□□□ 0.38
PLSCR4-201ENST00000354952 ABCC8Q09428 1581 aa17.39■□□□□ 0.37
PLSCR4-201ENST00000354952 DNMBPQ6XZF7 1577 aa17.3■□□□□ 0.36
PLSCR4-201ENST00000354952 URB2Q14146 1524 aaKnown RBP17.28■□□□□ 0.36
PLSCR4-201ENST00000354952 TOPBP1Q92547 1522 aa17.23■□□□□ 0.35
PLSCR4-201ENST00000354952 WDR97A6NE52 1622 aa17.21■□□□□ 0.35
PLSCR4-201ENST00000354952 BIVM-ERCC5R4GMW8 1640 aa17.2■□□□□ 0.34
PLSCR4-201ENST00000354952 TOP2BQ02880 1626 aa17.15■□□□□ 0.34
PLSCR4-201ENST00000354952 CUX1P39880 1505 aa17.15■□□□□ 0.34
PLSCR4-201ENST00000354952 IFT140Q96RY7 1462 aa17.13■□□□□ 0.33
PLSCR4-201ENST00000354952 TARBP1Q13395 1621 aaKnown RBP17.1■□□□□ 0.33
PLSCR4-201ENST00000354952 WRNQ14191 1432 aaPredicted RBP eCLIP17.08■□□□□ 0.32
PLSCR4-201ENST00000354952 POLA1P09884 1462 aaPredicted RBP17.07■□□□□ 0.32
PLSCR4-201ENST00000354952 SYNJ1O43426 1573 aa17.04■□□□□ 0.32
PLSCR4-201ENST00000354952 FGD5Q6ZNL6 1462 aa17.03■□□□□ 0.32
PLSCR4-201ENST00000354952 ABCA10Q8WWZ4 1543 aa17■□□□□ 0.31
PLSCR4-201ENST00000354952 SOGA1O94964 1423 aa16.95■□□□□ 0.3
PLSCR4-201ENST00000354952 ABCA5Q8WWZ7 1642 aa16.94■□□□□ 0.3
PLSCR4-201ENST00000354952 EIF4G3O43432 1585 aaKnown RBP16.94■□□□□ 0.3
PLSCR4-201ENST00000354952 RAD54L2Q9Y4B4 1467 aa16.87■□□□□ 0.29
PLSCR4-201ENST00000354952 ZNF608Q9ULD9 1512 aaPredicted RBP16.86■□□□□ 0.29
PLSCR4-201ENST00000354952 PBRM1Q86U86 1689 aa16.85■□□□□ 0.29
PLSCR4-201ENST00000354952 ERICH3Q5RHP9 1530 aa16.84■□□□□ 0.29
PLSCR4-201ENST00000354952 MAGI1Q96QZ7 1491 aaPredicted RBP16.83■□□□□ 0.28
PLSCR4-201ENST00000354952 GRIN2BQ13224 1484 aa16.82■□□□□ 0.28
PLSCR4-201ENST00000354952 GAPVD1Q14C86 1478 aa16.8■□□□□ 0.28
PLSCR4-201ENST00000354952 AQRO60306 1485 aaKnown RBP eCLIP16.75■□□□□ 0.273e-7■■■□□ 14.7
PLSCR4-201ENST00000354952 CUL7Q14999 1698 aa16.74■□□□□ 0.27
PLSCR4-201ENST00000354952 KIF27Q86VH2 1401 aa16.73■□□□□ 0.27
PLSCR4-201ENST00000354952 ADAMTS12P58397 1594 aa16.73■□□□□ 0.27
PLSCR4-201ENST00000354952 TDRD9Q8NDG6 1382 aaKnown RBP16.71■□□□□ 0.27
PLSCR4-201ENST00000354952 SYNJ2O15056 1496 aa16.7■□□□□ 0.26
PLSCR4-201ENST00000354952 SNAPC4Q5SXM2 1469 aa16.69■□□□□ 0.26
PLSCR4-201ENST00000354952 EEA1Q15075 1411 aa16.68■□□□□ 0.26
PLSCR4-201ENST00000354952 CHD1O14646 1710 aa16.67■□□□□ 0.26
PLSCR4-201ENST00000354952 FHAD1B1AJZ9 1412 aa16.67■□□□□ 0.26
PLSCR4-201ENST00000354952 IGF1RP08069 1367 aa16.61■□□□□ 0.25
PLSCR4-201ENST00000354952 TRIM41Q8WV44 630 aa16.6■□□□□ 0.25
PLSCR4-201ENST00000354952 CLASP1Q7Z460 1538 aa16.59■□□□□ 0.25
PLSCR4-201ENST00000354952 GRIN2AQ12879 1464 aa16.59■□□□□ 0.25
PLSCR4-201ENST00000354952 NUP160Q12769 1436 aa16.57■□□□□ 0.24
PLSCR4-201ENST00000354952 CHIC1Q5VXU3 224 aa16.57■□□□□ 0.24
PLSCR4-201ENST00000354952 PRXQ9BXM0 1461 aa16.52■□□□□ 0.24
PLSCR4-201ENST00000354952 SHROOM2Q13796 1616 aa16.51■□□□□ 0.23
PLSCR4-201ENST00000354952 OSCARQ8IYS5 282 aa16.51■□□□□ 0.23
PLSCR4-201ENST00000354952 CEP170Q5SW79 1584 aa16.5■□□□□ 0.23
PLSCR4-201ENST00000354952 CARMIL1Q5VZK9 1371 aa16.48■□□□□ 0.23
PLSCR4-201ENST00000354952 RAPGEF2Q9Y4G8 1499 aa16.48■□□□□ 0.23
PLSCR4-201ENST00000354952 KIF21BO75037 1637 aa16.48■□□□□ 0.23
PLSCR4-201ENST00000354952 RUSC2Q8N2Y8 1516 aa16.48■□□□□ 0.23
PLSCR4-201ENST00000354952 DNAJC5Q9H3Z4 198 aa16.47■□□□□ 0.23
PLSCR4-201ENST00000354952 CHMP7Q8WUX9 453 aaPredicted RBP16.46■□□□□ 0.23
PLSCR4-201ENST00000354952 KIAA0586Q9BVV6 1533 aa16.43■□□□□ 0.22
PLSCR4-201ENST00000354952 CTTNBP2Q8WZ74 1663 aa16.42■□□□□ 0.22
PLSCR4-201ENST00000354952 CSRNP3Q8WYN3 585 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms