RNA–Protein interactions for RNA: ENST00000354842.4

ARMCX4-201, Transcript of armadillo repeat containing X-linked 4, humanhuman

TSL 1 (best)

Gene ARMCX4, Length 3,788 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARMCX4-201ENST00000354842 NISCHQ9Y2I1 1504 aa19.48■□□□□ 0.71
ARMCX4-201ENST00000354842 DCAF8L2P0C7V8 631 aa17.81■□□□□ 0.44
ARMCX4-201ENST00000354842 SHROOM4Q9ULL8 1493 aa16.93■□□□□ 0.3
ARMCX4-201ENST00000354842 ABCC9O60706 1549 aa16.78■□□□□ 0.28
ARMCX4-201ENST00000354842 CCDC180Q9P1Z9 1646 aa16.55■□□□□ 0.24
ARMCX4-201ENST00000354842 SUPT5HO00267 1087 aaKnown RBP16.51■□□□□ 0.23
ARMCX4-201ENST00000354842 PABPN1Q86U42 306 aaKnown RBP eCLIP16.18■□□□□ 0.18
ARMCX4-201ENST00000354842 ZCCHC6Q5VYS8 1495 aaKnown RBP16.18■□□□□ 0.18
ARMCX4-201ENST00000354842 SCRIBQ14160 1630 aa15.88■□□□□ 0.13
ARMCX4-201ENST00000354842 RB1CC1Q8TDY2 1594 aa15.83■□□□□ 0.13
ARMCX4-201ENST00000354842 NACADO15069 1562 aa15.8■□□□□ 0.12
ARMCX4-201ENST00000354842 DCAF1Q9Y4B6 1507 aa15.7■□□□□ 0.1
ARMCX4-201ENST00000354842 EHMT2Q96KQ7 1210 aa15.51■□□□□ 0.07
ARMCX4-201ENST00000354842 MYO15BQ96JP2 1530 aa15.49■□□□□ 0.07
ARMCX4-201ENST00000354842 FAM9AQ8IZU1 332 aaPredicted RBP15.41■□□□□ 0.06
ARMCX4-201ENST00000354842 TRIM41Q8WV44 630 aa15.36■□□□□ 0.05
ARMCX4-201ENST00000354842 CECR2Q9BXF3 1484 aa15.34■□□□□ 0.05
ARMCX4-201ENST00000354842 RSF1Q96T23 1441 aaPredicted RBP15.25■□□□□ 0.03
ARMCX4-201ENST00000354842 CHIC1Q5VXU3 224 aa15.16■□□□□ 0.02
ARMCX4-201ENST00000354842 MROH2BQ7Z745 1585 aa15.12■□□□□ 0.01
ARMCX4-201ENST00000354842 BAZ1AQ9NRL2 1556 aaPredicted RBP15.11■□□□□ 0.01
ARMCX4-201ENST00000354842 RANGAP1P46060 587 aaPredicted RBP15.06■□□□□ 0
ARMCX4-201ENST00000354842 BAZ1BQ9UIG0 1483 aaKnown RBP15.03■□□□□ -0
ARMCX4-201ENST00000354842 BICRAQ9NZM4 1560 aa14.96□□□□□ -0.01
ARMCX4-201ENST00000354842 UBTFP17480 764 aaKnown RBP14.95□□□□□ -0.02
ARMCX4-201ENST00000354842 WIZO95785 1651 aa14.92□□□□□ -0.02
ARMCX4-201ENST00000354842 LOC105371045A0A1W2PR82 267 aa14.9□□□□□ -0.02
ARMCX4-201ENST00000354842 ATAD2BQ9ULI0 1458 aa14.88□□□□□ -0.03
ARMCX4-201ENST00000354842 SMARCA4P51532 1647 aa14.88□□□□□ -0.03
ARMCX4-201ENST00000354842 UNC13AQ9UPW8 1703 aa14.86□□□□□ -0.03
ARMCX4-201ENST00000354842 SMARCA2P51531 1590 aa14.85□□□□□ -0.03
ARMCX4-201ENST00000354842 EIF4G1Q04637 1599 aaKnown RBP14.83□□□□□ -0.03
ARMCX4-201ENST00000354842 DNAJC5BQ9UF47 199 aa14.82□□□□□ -0.04
ARMCX4-201ENST00000354842 CCDC88BA6NC98 1476 aa14.8□□□□□ -0.04
ARMCX4-201ENST00000354842 TTBK1Q5TCY1 1321 aaPredicted RBP14.77□□□□□ -0.04
ARMCX4-201ENST00000354842 ATP1B4Q9UN42 357 aaPredicted RBP14.74□□□□□ -0.05
ARMCX4-201ENST00000354842 TOP2AP11388 1531 aaKnown RBP14.71□□□□□ -0.05
ARMCX4-201ENST00000354842 APLP2Q06481 763 aa14.71□□□□□ -0.06
ARMCX4-201ENST00000354842 FBLN2P98095 1184 aa14.69□□□□□ -0.06
ARMCX4-201ENST00000354842 NCAPD3P42695 1498 aa14.68□□□□□ -0.06
ARMCX4-201ENST00000354842 CC2D2AQ9P2K1 1620 aa14.67□□□□□ -0.06
ARMCX4-201ENST00000354842 CSRNP3Q8WYN3 585 aa14.63□□□□□ -0.07
ARMCX4-201ENST00000354842 CADPSQ9ULU8 1353 aa14.61□□□□□ -0.07
ARMCX4-201ENST00000354842 PPARGC1BQ86YN6 1023 aaKnown RBP14.61□□□□□ -0.07
ARMCX4-201ENST00000354842 ERCC6Q03468 1493 aa14.61□□□□□ -0.07
ARMCX4-201ENST00000354842 WRNQ14191 1432 aaPredicted RBP eCLIP14.6□□□□□ -0.07
ARMCX4-201ENST00000354842 ABCC8Q09428 1581 aa14.52□□□□□ -0.08
ARMCX4-201ENST00000354842 PDS5BQ9NTI5 1447 aa14.51□□□□□ -0.09
ARMCX4-201ENST00000354842 P3H3Q8IVL6 736 aa14.46□□□□□ -0.09
ARMCX4-201ENST00000354842 NESP48681 1621 aa14.46□□□□□ -0.09
ARMCX4-201ENST00000354842 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.45□□□□□ -0.1
ARMCX4-201ENST00000354842 HNRNPUL2Q1KMD3 747 aaKnown RBP14.45□□□□□ -0.1
ARMCX4-201ENST00000354842 HMGXB3Q12766 1538 aa14.44□□□□□ -0.1
ARMCX4-201ENST00000354842 FANCD2Q9BXW9 1451 aa14.42□□□□□ -0.1
ARMCX4-201ENST00000354842 PCGF6Q9BYE7 350 aa14.4□□□□□ -0.1
ARMCX4-201ENST00000354842 CHMP7Q8WUX9 453 aaPredicted RBP14.38□□□□□ -0.11
ARMCX4-201ENST00000354842 SOGA1O94964 1423 aa14.38□□□□□ -0.11
ARMCX4-201ENST00000354842 CEP164Q9UPV0 1460 aa14.37□□□□□ -0.11
ARMCX4-201ENST00000354842 TDRD9Q8NDG6 1382 aaKnown RBP14.36□□□□□ -0.11
ARMCX4-201ENST00000354842 PEG3Q9GZU2 1588 aa14.35□□□□□ -0.11
ARMCX4-201ENST00000354842 CFTRP13569 1480 aa14.34□□□□□ -0.11
ARMCX4-201ENST00000354842 KIF27Q86VH2 1401 aa14.33□□□□□ -0.11
ARMCX4-201ENST00000354842 CUX2O14529 1486 aa14.33□□□□□ -0.12
ARMCX4-201ENST00000354842 ARID3CA6NKF2 412 aa14.32□□□□□ -0.12
ARMCX4-201ENST00000354842 EEA1Q15075 1411 aa14.23□□□□□ -0.13
ARMCX4-201ENST00000354842 ITGAEP38570 1179 aa14.22□□□□□ -0.13
ARMCX4-201ENST00000354842 RUSC2Q8N2Y8 1516 aa14.22□□□□□ -0.13
ARMCX4-201ENST00000354842 CARMIL1Q5VZK9 1371 aa14.21□□□□□ -0.13
ARMCX4-201ENST00000354842 RAD54L2Q9Y4B4 1467 aa14.21□□□□□ -0.14
ARMCX4-201ENST00000354842 FGD5Q6ZNL6 1462 aa14.18□□□□□ -0.14
ARMCX4-201ENST00000354842 GOLGA3Q08378 1498 aa14.13□□□□□ -0.15
ARMCX4-201ENST00000354842 LAMC3Q9Y6N6 1575 aa14.12□□□□□ -0.15
ARMCX4-201ENST00000354842 SYNJ1O43426 1573 aa14.11□□□□□ -0.15
ARMCX4-201ENST00000354842 AQRO60306 1485 aaKnown RBP eCLIP14.1□□□□□ -0.15
ARMCX4-201ENST00000354842 TRIM26Q12899 539 aaPredicted RBP14.1□□□□□ -0.15
ARMCX4-201ENST00000354842 CLIP1P30622 1438 aa14.1□□□□□ -0.15
ARMCX4-201ENST00000354842 CUX1P39880 1505 aa14.1□□□□□ -0.15
ARMCX4-201ENST00000354842 TOPBP1Q92547 1522 aa14.09□□□□□ -0.15
ARMCX4-201ENST00000354842 MRC2Q9UBG0 1479 aa14.09□□□□□ -0.15
ARMCX4-201ENST00000354842 MYT1LQ9UL68 1186 aa14.06□□□□□ -0.16
ARMCX4-201ENST00000354842 IGF1RP08069 1367 aa14.06□□□□□ -0.16
ARMCX4-201ENST00000354842 TNIKQ9UKE5 1360 aa14.06□□□□□ -0.16
ARMCX4-201ENST00000354842 CEP162Q5TB80 1403 aa14.06□□□□□ -0.16
ARMCX4-201ENST00000354842 FAM50AQ14320 339 aaKnown RBP14.04□□□□□ -0.16
ARMCX4-201ENST00000354842 POLA1P09884 1462 aaPredicted RBP14.04□□□□□ -0.16
ARMCX4-201ENST00000354842 GAPVD1Q14C86 1478 aa14.03□□□□□ -0.16
ARMCX4-201ENST00000354842 RAPGEF2Q9Y4G8 1499 aa14.01□□□□□ -0.17
ARMCX4-201ENST00000354842 URB2Q14146 1524 aaKnown RBP14□□□□□ -0.17
ARMCX4-201ENST00000354842 CCER1Q8TC90 406 aaPredicted RBP13.99□□□□□ -0.17
ARMCX4-201ENST00000354842 TOP2BQ02880 1626 aa13.98□□□□□ -0.17
ARMCX4-201ENST00000354842 NPM1P06748 294 aaKnown RBP eCLIP13.97□□□□□ -0.17
ARMCX4-201ENST00000354842 DNMBPQ6XZF7 1577 aa13.97□□□□□ -0.17
ARMCX4-201ENST00000354842 CDK11AQ9UQ88 783 aaPredicted RBP13.96□□□□□ -0.17
ARMCX4-201ENST00000354842 ZNF777Q9ULD5 760 aaPredicted RBP13.95□□□□□ -0.18
ARMCX4-201ENST00000354842 JPH4Q96JJ6 628 aa13.94□□□□□ -0.18
ARMCX4-201ENST00000354842 IFT140Q96RY7 1462 aa13.92□□□□□ -0.18
ARMCX4-201ENST00000354842 KCNH8Q96L42 1107 aa13.92□□□□□ -0.18
ARMCX4-201ENST00000354842 OSCARQ8IYS5 282 aa13.89□□□□□ -0.19
ARMCX4-201ENST00000354842 GRIN2BQ13224 1484 aa13.88□□□□□ -0.19
ARMCX4-201ENST00000354842 ZNF608Q9ULD9 1512 aaPredicted RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 132.1 ms