RNA–Protein interactions for RNA: ENST00000354480.2

RBM3-201, Transcript of RNA binding motif protein 3, humanhuman

TSL 2 BASIC

Gene RBM3, Length 1,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM3-201ENST00000354480 NISCHQ9Y2I1 1504 aa28.35■■■□□ 2.13
RBM3-201ENST00000354480 CCDC180Q9P1Z9 1646 aa24.67■■□□□ 1.54
RBM3-201ENST00000354480 ZCCHC6Q5VYS8 1495 aaKnown RBP23.83■■□□□ 1.41
RBM3-201ENST00000354480 DCAF1Q9Y4B6 1507 aa23.49■■□□□ 1.35
RBM3-201ENST00000354480 DCAF8L2P0C7V8 631 aa23.41■■□□□ 1.34
RBM3-201ENST00000354480 ABCC9O60706 1549 aa23.2■■□□□ 1.3
RBM3-201ENST00000354480 MYO15BQ96JP2 1530 aa23.19■■□□□ 1.3
RBM3-201ENST00000354480 SHROOM4Q9ULL8 1493 aa23.15■■□□□ 1.3
RBM3-201ENST00000354480 NACADO15069 1562 aa22.99■■□□□ 1.27
RBM3-201ENST00000354480 RB1CC1Q8TDY2 1594 aa22.76■■□□□ 1.23
RBM3-201ENST00000354480 SCRIBQ14160 1630 aa22.65■■□□□ 1.22
RBM3-201ENST00000354480 SUPT5HO00267 1087 aaKnown RBP22.39■■□□□ 1.17
RBM3-201ENST00000354480 UNC13AQ9UPW8 1703 aa22.14■■□□□ 1.14
RBM3-201ENST00000354480 RSF1Q96T23 1441 aaPredicted RBP22.03■■□□□ 1.12
RBM3-201ENST00000354480 BICRAQ9NZM4 1560 aa21.99■■□□□ 1.11
RBM3-201ENST00000354480 CECR2Q9BXF3 1484 aa21.98■■□□□ 1.11
RBM3-201ENST00000354480 PABPN1Q86U42 306 aaKnown RBP eCLIP21.92■■□□□ 1.12e-6■□□□□ 8.1
RBM3-201ENST00000354480 BAZ1AQ9NRL2 1556 aaPredicted RBP21.9■■□□□ 1.1
RBM3-201ENST00000354480 MROH2BQ7Z745 1585 aa21.87■■□□□ 1.09
RBM3-201ENST00000354480 SMARCA4P51532 1647 aa21.75■■□□□ 1.07
RBM3-201ENST00000354480 WIZO95785 1651 aa21.67■■□□□ 1.06
RBM3-201ENST00000354480 TOP2AP11388 1531 aaKnown RBP21.52■■□□□ 1.04
RBM3-201ENST00000354480 PEG3Q9GZU2 1588 aa21.5■■□□□ 1.03
RBM3-201ENST00000354480 CHIC1Q5VXU3 224 aa21.49■■□□□ 1.03
RBM3-201ENST00000354480 SMARCA2P51531 1590 aa21.41■■□□□ 1.02
RBM3-201ENST00000354480 ATAD2BQ9ULI0 1458 aa21.4■■□□□ 1.02
RBM3-201ENST00000354480 EIF4G1Q04637 1599 aaKnown RBP21.35■■□□□ 1.01
RBM3-201ENST00000354480 CCDC88BA6NC98 1476 aa21.3■■□□□ 1
RBM3-201ENST00000354480 BAZ1BQ9UIG0 1483 aaKnown RBP21.29■■□□□ 1
RBM3-201ENST00000354480 NCAPD3P42695 1498 aa21.22■□□□□ 0.99
RBM3-201ENST00000354480 HMGXB3Q12766 1538 aa21.18■□□□□ 0.98
RBM3-201ENST00000354480 TRIM41Q8WV44 630 aa21.09■□□□□ 0.97
RBM3-201ENST00000354480 CC2D2AQ9P2K1 1620 aa20.99■□□□□ 0.95
RBM3-201ENST00000354480 ABCC8Q09428 1581 aa20.81■□□□□ 0.92
RBM3-201ENST00000354480 CFTRP13569 1480 aa20.76■□□□□ 0.91
RBM3-201ENST00000354480 WRNQ14191 1432 aaPredicted RBP eCLIP20.76■□□□□ 0.91
RBM3-201ENST00000354480 CADPSQ9ULU8 1353 aa20.69■□□□□ 0.9
RBM3-201ENST00000354480 LOC105371045A0A1W2PR82 267 aa20.64■□□□□ 0.89
RBM3-201ENST00000354480 FAM9AQ8IZU1 332 aaPredicted RBP20.64■□□□□ 0.89
RBM3-201ENST00000354480 EEA1Q15075 1411 aa20.6■□□□□ 0.89
RBM3-201ENST00000354480 SYNJ1O43426 1573 aa20.59■□□□□ 0.89
RBM3-201ENST00000354480 PRDM2Q13029 1718 aa20.58■□□□□ 0.89
RBM3-201ENST00000354480 TOP2BQ02880 1626 aa20.55■□□□□ 0.88
RBM3-201ENST00000354480 BIVM-ERCC5R4GMW8 1640 aa20.51■□□□□ 0.87
RBM3-201ENST00000354480 SOGA1O94964 1423 aa20.49■□□□□ 0.87
RBM3-201ENST00000354480 LAMC3Q9Y6N6 1575 aa20.46■□□□□ 0.87
RBM3-201ENST00000354480 CUX1P39880 1505 aa20.45■□□□□ 0.86
RBM3-201ENST00000354480 CSRNP3Q8WYN3 585 aa20.44■□□□□ 0.86
RBM3-201ENST00000354480 FANCD2Q9BXW9 1451 aa20.44■□□□□ 0.86
RBM3-201ENST00000354480 NESP48681 1621 aa20.37■□□□□ 0.85
RBM3-201ENST00000354480 RUSC2Q8N2Y8 1516 aa20.37■□□□□ 0.85
RBM3-201ENST00000354480 DNAJC5BQ9UF47 199 aa20.35■□□□□ 0.85
RBM3-201ENST00000354480 PDS5BQ9NTI5 1447 aa20.35■□□□□ 0.85
RBM3-201ENST00000354480 CEP164Q9UPV0 1460 aa20.3■□□□□ 0.84
RBM3-201ENST00000354480 EHMT2Q96KQ7 1210 aa20.3■□□□□ 0.84
RBM3-201ENST00000354480 DNMBPQ6XZF7 1577 aa20.27■□□□□ 0.84
RBM3-201ENST00000354480 GOLGA3Q08378 1498 aa20.26■□□□□ 0.83
RBM3-201ENST00000354480 KIF27Q86VH2 1401 aa20.26■□□□□ 0.83
RBM3-201ENST00000354480 TNIKQ9UKE5 1360 aa20.23■□□□□ 0.83
RBM3-201ENST00000354480 KIF21BO75037 1637 aa20.23■□□□□ 0.83
RBM3-201ENST00000354480 FGD5Q6ZNL6 1462 aa20.23■□□□□ 0.83
RBM3-201ENST00000354480 TOPBP1Q92547 1522 aa20.22■□□□□ 0.83
RBM3-201ENST00000354480 UBTFP17480 764 aaKnown RBP20.18■□□□□ 0.82
RBM3-201ENST00000354480 CUX2O14529 1486 aa20.14■□□□□ 0.81
RBM3-201ENST00000354480 URB2Q14146 1524 aaKnown RBP20.14■□□□□ 0.81
RBM3-201ENST00000354480 POLA1P09884 1462 aaPredicted RBP20.11■□□□□ 0.81
RBM3-201ENST00000354480 PRXQ9BXM0 1461 aa20.11■□□□□ 0.81
RBM3-201ENST00000354480 ERICH3Q5RHP9 1530 aa20.1■□□□□ 0.81
RBM3-201ENST00000354480 KIF21AQ7Z4S6 1674 aa20.1■□□□□ 0.81
RBM3-201ENST00000354480 CEP162Q5TB80 1403 aa20.08■□□□□ 0.81
RBM3-201ENST00000354480 ABCA10Q8WWZ4 1543 aa20.08■□□□□ 0.81
RBM3-201ENST00000354480 RAPGEF2Q9Y4G8 1499 aa20.07■□□□□ 0.8
RBM3-201ENST00000354480 MRC2Q9UBG0 1479 aa20.04■□□□□ 0.8
RBM3-201ENST00000354480 IGF1RP08069 1367 aa20.04■□□□□ 0.8
RBM3-201ENST00000354480 RAD54L2Q9Y4B4 1467 aa20.03■□□□□ 0.8
RBM3-201ENST00000354480 CARMIL1Q5VZK9 1371 aa19.96■□□□□ 0.79
RBM3-201ENST00000354480 ERCC6Q03468 1493 aa19.94■□□□□ 0.78
RBM3-201ENST00000354480 CLIP1P30622 1438 aa19.93■□□□□ 0.78
RBM3-201ENST00000354480 AEBP2Q6ZN18 517 aaPredicted RBP19.92■□□□□ 0.78
RBM3-201ENST00000354480 WDR97A6NE52 1622 aa19.92■□□□□ 0.78
RBM3-201ENST00000354480 WDR62O43379 1518 aa19.9■□□□□ 0.78
RBM3-201ENST00000354480 TRIM26Q12899 539 aaPredicted RBP19.88■□□□□ 0.77
RBM3-201ENST00000354480 TARBP1Q13395 1621 aaKnown RBP19.87■□□□□ 0.77
RBM3-201ENST00000354480 CUL7Q14999 1698 aa19.87■□□□□ 0.77
RBM3-201ENST00000354480 ABCA5Q8WWZ7 1642 aa19.86■□□□□ 0.77
RBM3-201ENST00000354480 GAPVD1Q14C86 1478 aa19.86■□□□□ 0.77
RBM3-201ENST00000354480 TDRD9Q8NDG6 1382 aaKnown RBP19.85■□□□□ 0.77
RBM3-201ENST00000354480 IFT140Q96RY7 1462 aa19.84■□□□□ 0.77
RBM3-201ENST00000354480 PCGF6Q9BYE7 350 aa19.84■□□□□ 0.77
RBM3-201ENST00000354480 THOC2Q8NI27 1593 aaKnown RBP19.77■□□□□ 0.76
RBM3-201ENST00000354480 VPS8Q8N3P4 1428 aa19.77■□□□□ 0.76
RBM3-201ENST00000354480 RANGAP1P46060 587 aaPredicted RBP19.75■□□□□ 0.75
RBM3-201ENST00000354480 GRIN2BQ13224 1484 aa19.71■□□□□ 0.75
RBM3-201ENST00000354480 AQRO60306 1485 aaKnown RBP eCLIP19.7■□□□□ 0.746e-20■■■■■ 52.7
RBM3-201ENST00000354480 FHAD1B1AJZ9 1412 aa19.68■□□□□ 0.74
RBM3-201ENST00000354480 ARAP1Q96P48 1450 aa19.67■□□□□ 0.74
RBM3-201ENST00000354480 APLP2Q06481 763 aa19.67■□□□□ 0.74
RBM3-201ENST00000354480 PBRM1Q86U86 1689 aa19.66■□□□□ 0.74
RBM3-201ENST00000354480 ARHGAP35Q9NRY4 1499 aa19.66■□□□□ 0.74
RBM3-201ENST00000354480 ZNF608Q9ULD9 1512 aaPredicted RBP19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 254.7 ms