RNA–Protein interactions for RNA: ENST00000352187.5

SLC43A3-201, Transcript of solute carrier family 43 member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLC43A3, Length 2,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC43A3-201ENST00000352187 NISCHQ9Y2I1 1504 aa25.34■■□□□ 1.65
SLC43A3-201ENST00000352187 CCDC180Q9P1Z9 1646 aa22.4■■□□□ 1.18
SLC43A3-201ENST00000352187 ZCCHC6Q5VYS8 1495 aaKnown RBP21.3■■□□□ 1
SLC43A3-201ENST00000352187 DCAF1Q9Y4B6 1507 aa21.21■□□□□ 0.99
SLC43A3-201ENST00000352187 MYO15BQ96JP2 1530 aa21.1■□□□□ 0.97
SLC43A3-201ENST00000352187 ABCC9O60706 1549 aa20.88■□□□□ 0.93
SLC43A3-201ENST00000352187 NACADO15069 1562 aa20.85■□□□□ 0.93
SLC43A3-201ENST00000352187 RB1CC1Q8TDY2 1594 aa20.65■□□□□ 0.9
SLC43A3-201ENST00000352187 DCAF8L2P0C7V8 631 aa20.43■□□□□ 0.86
SLC43A3-201ENST00000352187 SCRIBQ14160 1630 aa20.19■□□□□ 0.82
SLC43A3-201ENST00000352187 UNC13AQ9UPW8 1703 aa20.11■□□□□ 0.81
SLC43A3-201ENST00000352187 SHROOM4Q9ULL8 1493 aa20.09■□□□□ 0.81
SLC43A3-201ENST00000352187 BICRAQ9NZM4 1560 aa19.94■□□□□ 0.78
SLC43A3-201ENST00000352187 BAZ1AQ9NRL2 1556 aaPredicted RBP19.64■□□□□ 0.73
SLC43A3-201ENST00000352187 SMARCA4P51532 1647 aa19.53■□□□□ 0.72
SLC43A3-201ENST00000352187 CECR2Q9BXF3 1484 aa19.5■□□□□ 0.71
SLC43A3-201ENST00000352187 PABPN1Q86U42 306 aaKnown RBP eCLIP19.5■□□□□ 0.71
SLC43A3-201ENST00000352187 RSF1Q96T23 1441 aaPredicted RBP19.5■□□□□ 0.71
SLC43A3-201ENST00000352187 PEG3Q9GZU2 1588 aa19.47■□□□□ 0.71
SLC43A3-201ENST00000352187 MROH2BQ7Z745 1585 aa19.44■□□□□ 0.7
SLC43A3-201ENST00000352187 EIF4G1Q04637 1599 aaKnown RBP19.34■□□□□ 0.69
SLC43A3-201ENST00000352187 SMARCA2P51531 1590 aa19.32■□□□□ 0.68
SLC43A3-201ENST00000352187 WIZO95785 1651 aa19.25■□□□□ 0.67
SLC43A3-201ENST00000352187 TOP2AP11388 1531 aaKnown RBP19.24■□□□□ 0.67
SLC43A3-201ENST00000352187 ATAD2BQ9ULI0 1458 aa19.22■□□□□ 0.67
SLC43A3-201ENST00000352187 HMGXB3Q12766 1538 aa19.2■□□□□ 0.66
SLC43A3-201ENST00000352187 SUPT5HO00267 1087 aaKnown RBP19.19■□□□□ 0.66
SLC43A3-201ENST00000352187 NCAPD3P42695 1498 aa19.18■□□□□ 0.66
SLC43A3-201ENST00000352187 BAZ1BQ9UIG0 1483 aaKnown RBP19.07■□□□□ 0.64
SLC43A3-201ENST00000352187 CC2D2AQ9P2K1 1620 aa19.06■□□□□ 0.64
SLC43A3-201ENST00000352187 CCDC88BA6NC98 1476 aa18.89■□□□□ 0.61
SLC43A3-201ENST00000352187 PRDM2Q13029 1718 aa18.68■□□□□ 0.58
SLC43A3-201ENST00000352187 CFTRP13569 1480 aa18.66■□□□□ 0.58
SLC43A3-201ENST00000352187 LAMC3Q9Y6N6 1575 aa18.58■□□□□ 0.57
SLC43A3-201ENST00000352187 CADPSQ9ULU8 1353 aa18.58■□□□□ 0.56
SLC43A3-201ENST00000352187 CHIC1Q5VXU3 224 aa18.48■□□□□ 0.55
SLC43A3-201ENST00000352187 DNAJC5BQ9UF47 199 aa18.46■□□□□ 0.55
SLC43A3-201ENST00000352187 BIVM-ERCC5R4GMW8 1640 aa18.37■□□□□ 0.53
SLC43A3-201ENST00000352187 PDS5BQ9NTI5 1447 aa18.37■□□□□ 0.53
SLC43A3-201ENST00000352187 WRNQ14191 1432 aaPredicted RBP eCLIP18.36■□□□□ 0.53
SLC43A3-201ENST00000352187 TOP2BQ02880 1626 aa18.34■□□□□ 0.53
SLC43A3-201ENST00000352187 FANCD2Q9BXW9 1451 aa18.33■□□□□ 0.53
SLC43A3-201ENST00000352187 ABCC8Q09428 1581 aa18.33■□□□□ 0.52
SLC43A3-201ENST00000352187 CEP164Q9UPV0 1460 aa18.27■□□□□ 0.52
SLC43A3-201ENST00000352187 NESP48681 1621 aa18.27■□□□□ 0.51
SLC43A3-201ENST00000352187 SYNJ1O43426 1573 aa18.27■□□□□ 0.51
SLC43A3-201ENST00000352187 TRIM41Q8WV44 630 aa18.25■□□□□ 0.51
SLC43A3-201ENST00000352187 DNMBPQ6XZF7 1577 aa18.25■□□□□ 0.51
SLC43A3-201ENST00000352187 CUX1P39880 1505 aa18.23■□□□□ 0.51
SLC43A3-201ENST00000352187 EEA1Q15075 1411 aa18.2■□□□□ 0.5
SLC43A3-201ENST00000352187 KIF21AQ7Z4S6 1674 aa18.19■□□□□ 0.5
SLC43A3-201ENST00000352187 TOPBP1Q92547 1522 aa18.14■□□□□ 0.49
SLC43A3-201ENST00000352187 MRC2Q9UBG0 1479 aa18.14■□□□□ 0.49
SLC43A3-201ENST00000352187 WDR62O43379 1518 aa18.11■□□□□ 0.49
SLC43A3-201ENST00000352187 URB2Q14146 1524 aaKnown RBP18.1■□□□□ 0.49
SLC43A3-201ENST00000352187 WDR97A6NE52 1622 aa18.06■□□□□ 0.48
SLC43A3-201ENST00000352187 THOC2Q8NI27 1593 aaKnown RBP18.05■□□□□ 0.48
SLC43A3-201ENST00000352187 FGD5Q6ZNL6 1462 aa18.04■□□□□ 0.48
SLC43A3-201ENST00000352187 ABCA10Q8WWZ4 1543 aa18.01■□□□□ 0.47
SLC43A3-201ENST00000352187 POLA1P09884 1462 aaPredicted RBP18.01■□□□□ 0.47
SLC43A3-201ENST00000352187 ERCC6Q03468 1493 aa18■□□□□ 0.47
SLC43A3-201ENST00000352187 KIF27Q86VH2 1401 aa17.96■□□□□ 0.47
SLC43A3-201ENST00000352187 TARBP1Q13395 1621 aaKnown RBP17.94■□□□□ 0.46
SLC43A3-201ENST00000352187 IFT140Q96RY7 1462 aa17.92■□□□□ 0.46
SLC43A3-201ENST00000352187 PELP1Q8IZL8 1130 aaKnown RBP17.92■□□□□ 0.46
SLC43A3-201ENST00000352187 SOGA1O94964 1423 aa17.92■□□□□ 0.46
SLC43A3-201ENST00000352187 KIF21BO75037 1637 aa17.92■□□□□ 0.46
SLC43A3-201ENST00000352187 ABCA5Q8WWZ7 1642 aa17.89■□□□□ 0.45
SLC43A3-201ENST00000352187 CUX2O14529 1486 aa17.87■□□□□ 0.45
SLC43A3-201ENST00000352187 ERICH3Q5RHP9 1530 aa17.87■□□□□ 0.45
SLC43A3-201ENST00000352187 CSRNP3Q8WYN3 585 aa17.85■□□□□ 0.45
SLC43A3-201ENST00000352187 CUL7Q14999 1698 aa17.83■□□□□ 0.44
SLC43A3-201ENST00000352187 PRXQ9BXM0 1461 aa17.82■□□□□ 0.44
SLC43A3-201ENST00000352187 RUSC2Q8N2Y8 1516 aa17.82■□□□□ 0.44
SLC43A3-201ENST00000352187 RAD54L2Q9Y4B4 1467 aa17.81■□□□□ 0.44
SLC43A3-201ENST00000352187 GOLGA3Q08378 1498 aa17.78■□□□□ 0.44
SLC43A3-201ENST00000352187 IGF1RP08069 1367 aa17.76■□□□□ 0.43
SLC43A3-201ENST00000352187 GAPVD1Q14C86 1478 aa17.75■□□□□ 0.43
SLC43A3-201ENST00000352187 PBRM1Q86U86 1689 aa17.73■□□□□ 0.43
SLC43A3-201ENST00000352187 GRIN2BQ13224 1484 aa17.71■□□□□ 0.43
SLC43A3-201ENST00000352187 TNIKQ9UKE5 1360 aa17.7■□□□□ 0.42
SLC43A3-201ENST00000352187 RAPGEF2Q9Y4G8 1499 aa17.69■□□□□ 0.42
SLC43A3-201ENST00000352187 EIF4G3O43432 1585 aaKnown RBP17.68■□□□□ 0.42
SLC43A3-201ENST00000352187 CARMIL1Q5VZK9 1371 aa17.65■□□□□ 0.42
SLC43A3-201ENST00000352187 ADAMTS12P58397 1594 aa17.64■□□□□ 0.42
SLC43A3-201ENST00000352187 MAGI1Q96QZ7 1491 aaPredicted RBP17.64■□□□□ 0.41
SLC43A3-201ENST00000352187 FHAD1B1AJZ9 1412 aa17.63■□□□□ 0.41
SLC43A3-201ENST00000352187 FAM9AQ8IZU1 332 aaPredicted RBP17.63■□□□□ 0.41
SLC43A3-201ENST00000352187 TDRD9Q8NDG6 1382 aaKnown RBP17.62■□□□□ 0.41
SLC43A3-201ENST00000352187 ZNF608Q9ULD9 1512 aaPredicted RBP17.6■□□□□ 0.41
SLC43A3-201ENST00000352187 AQRO60306 1485 aaKnown RBP eCLIP17.57■□□□□ 0.41e-7■■■■■ 33.9
SLC43A3-201ENST00000352187 LOC105371045A0A1W2PR82 267 aa17.54■□□□□ 0.4
SLC43A3-201ENST00000352187 CTTNBP2Q8WZ74 1663 aa17.53■□□□□ 0.4
SLC43A3-201ENST00000352187 SYNJ2O15056 1496 aa17.52■□□□□ 0.39
SLC43A3-201ENST00000352187 SNAPC4Q5SXM2 1469 aa17.51■□□□□ 0.39
SLC43A3-201ENST00000352187 CEP162Q5TB80 1403 aa17.48■□□□□ 0.39
SLC43A3-201ENST00000352187 MYT1Q01538 1121 aa17.47■□□□□ 0.39
SLC43A3-201ENST00000352187 GRIN2AQ12879 1464 aa17.46■□□□□ 0.39
SLC43A3-201ENST00000352187 EFCAB5A4FU69 1503 aa17.46■□□□□ 0.39
SLC43A3-201ENST00000352187 UBTFP17480 764 aaKnown RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms