RNA–Protein interactions for RNA: ENST00000351500.7

PFDN5-203, Transcript of prefoldin subunit 5, humanhuman

TSL 1 (best) BASIC

Gene PFDN5, Length 478 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-203ENST00000351500 NISCHQ9Y2I1 1504 aa20.39■□□□□ 0.85
PFDN5-203ENST00000351500 ABCC9O60706 1549 aa18.31■□□□□ 0.52
PFDN5-203ENST00000351500 CCDC180Q9P1Z9 1646 aa18.07■□□□□ 0.48
PFDN5-203ENST00000351500 RB1CC1Q8TDY2 1594 aa17.28■□□□□ 0.36
PFDN5-203ENST00000351500 DNAJC5BQ9UF47 199 aa17.24■□□□□ 0.35
PFDN5-203ENST00000351500 DCAF8L2P0C7V8 631 aa17.2■□□□□ 0.34
PFDN5-203ENST00000351500 NACADO15069 1562 aa17.11■□□□□ 0.33
PFDN5-203ENST00000351500 ZCCHC6Q5VYS8 1495 aaKnown RBP17.09■□□□□ 0.33
PFDN5-203ENST00000351500 PABPN1Q86U42 306 aaKnown RBP eCLIP17.06■□□□□ 0.32
PFDN5-203ENST00000351500 DCAF1Q9Y4B6 1507 aa16.95■□□□□ 0.3
PFDN5-203ENST00000351500 UNC13AQ9UPW8 1703 aa16.9■□□□□ 0.3
PFDN5-203ENST00000351500 MYO15BQ96JP2 1530 aa16.84■□□□□ 0.29
PFDN5-203ENST00000351500 BICRAQ9NZM4 1560 aa16.81■□□□□ 0.28
PFDN5-203ENST00000351500 SCRIBQ14160 1630 aa16.59■□□□□ 0.25
PFDN5-203ENST00000351500 CC2D2AQ9P2K1 1620 aa16.48■□□□□ 0.23
PFDN5-203ENST00000351500 CECR2Q9BXF3 1484 aa16.46■□□□□ 0.23
PFDN5-203ENST00000351500 SHROOM4Q9ULL8 1493 aa16.46■□□□□ 0.23
PFDN5-203ENST00000351500 EIF4G1Q04637 1599 aaKnown RBP16.41■□□□□ 0.22
PFDN5-203ENST00000351500 DNAJC5Q9H3Z4 198 aa15.83■□□□□ 0.12
PFDN5-203ENST00000351500 ERCC6Q03468 1493 aa15.81■□□□□ 0.12
PFDN5-203ENST00000351500 NCAPD3P42695 1498 aa15.8■□□□□ 0.12
PFDN5-203ENST00000351500 SUPT5HO00267 1087 aaKnown RBP15.8■□□□□ 0.12
PFDN5-203ENST00000351500 ATAD2BQ9ULI0 1458 aa15.78■□□□□ 0.12
PFDN5-203ENST00000351500 BAZ1AQ9NRL2 1556 aaPredicted RBP15.78■□□□□ 0.12
PFDN5-203ENST00000351500 RSF1Q96T23 1441 aaPredicted RBP15.77■□□□□ 0.12
PFDN5-203ENST00000351500 SMARCA4P51532 1647 aa15.76■□□□□ 0.11
PFDN5-203ENST00000351500 SMARCA2P51531 1590 aa15.71■□□□□ 0.11
PFDN5-203ENST00000351500 NESP48681 1621 aa15.71■□□□□ 0.11
PFDN5-203ENST00000351500 CUX2O14529 1486 aa15.71■□□□□ 0.1
PFDN5-203ENST00000351500 MROH2BQ7Z745 1585 aa15.69■□□□□ 0.1
PFDN5-203ENST00000351500 HMGXB3Q12766 1538 aa15.68■□□□□ 0.1
PFDN5-203ENST00000351500 BAZ1BQ9UIG0 1483 aaKnown RBP15.65■□□□□ 0.1
PFDN5-203ENST00000351500 PEG3Q9GZU2 1588 aa15.53■□□□□ 0.08
PFDN5-203ENST00000351500 THOC2Q8NI27 1593 aaKnown RBP15.49■□□□□ 0.07
PFDN5-203ENST00000351500 WIZO95785 1651 aa15.48■□□□□ 0.07
PFDN5-203ENST00000351500 LAMC3Q9Y6N6 1575 aa15.47■□□□□ 0.07
PFDN5-203ENST00000351500 KIF21AQ7Z4S6 1674 aa15.45■□□□□ 0.06
PFDN5-203ENST00000351500 TOP2AP11388 1531 aaKnown RBP15.43■□□□□ 0.06
PFDN5-203ENST00000351500 PDS5BQ9NTI5 1447 aa15.41■□□□□ 0.06
PFDN5-203ENST00000351500 CADPSQ9ULU8 1353 aa15.36■□□□□ 0.05
PFDN5-203ENST00000351500 MRC2Q9UBG0 1479 aa15.31■□□□□ 0.04
PFDN5-203ENST00000351500 CCDC88BA6NC98 1476 aa15.27■□□□□ 0.04
PFDN5-203ENST00000351500 WDR62O43379 1518 aa15.24■□□□□ 0.03
PFDN5-203ENST00000351500 TRIM41Q8WV44 630 aa15.24■□□□□ 0.03
PFDN5-203ENST00000351500 CEP164Q9UPV0 1460 aa15.23■□□□□ 0.03
PFDN5-203ENST00000351500 FANCD2Q9BXW9 1451 aa15.21■□□□□ 0.03
PFDN5-203ENST00000351500 CFTRP13569 1480 aa15.14■□□□□ 0.01
PFDN5-203ENST00000351500 URB2Q14146 1524 aaKnown RBP15.11■□□□□ 0.01
PFDN5-203ENST00000351500 CHIC1Q5VXU3 224 aa15.08■□□□□ 0
PFDN5-203ENST00000351500 OSCARQ8IYS5 282 aa15.01□□□□□ -0.01
PFDN5-203ENST00000351500 ZNF608Q9ULD9 1512 aaPredicted RBP14.96□□□□□ -0.02
PFDN5-203ENST00000351500 PRDM2Q13029 1718 aa14.95□□□□□ -0.02
PFDN5-203ENST00000351500 TOPBP1Q92547 1522 aa14.91□□□□□ -0.02
PFDN5-203ENST00000351500 IFT140Q96RY7 1462 aa14.9□□□□□ -0.02
PFDN5-203ENST00000351500 WRNQ14191 1432 aaPredicted RBP eCLIP14.87□□□□□ -0.033e-8■□□□□ 9.6
PFDN5-203ENST00000351500 RIMBP3CA6NJZ7 1639 aa14.85□□□□□ -0.03
PFDN5-203ENST00000351500 RIMBP3BA6NNM3 1639 aa14.85□□□□□ -0.03
PFDN5-203ENST00000351500 RIMBP3Q9UFD9 1639 aa14.85□□□□□ -0.03
PFDN5-203ENST00000351500 EIF4G3O43432 1585 aaKnown RBP14.85□□□□□ -0.03
PFDN5-203ENST00000351500 DNMBPQ6XZF7 1577 aa14.83□□□□□ -0.04
PFDN5-203ENST00000351500 AQRO60306 1485 aaKnown RBP eCLIP14.81□□□□□ -0.046e-7■■■■■ 32.7
PFDN5-203ENST00000351500 ARHGEF11O15085 1522 aa14.8□□□□□ -0.04
PFDN5-203ENST00000351500 FBLN2P98095 1184 aa14.79□□□□□ -0.04
PFDN5-203ENST00000351500 ABCC8Q09428 1581 aa14.79□□□□□ -0.04
PFDN5-203ENST00000351500 TARBP1Q13395 1621 aaKnown RBP14.76□□□□□ -0.05
PFDN5-203ENST00000351500 POLA1P09884 1462 aaPredicted RBP14.76□□□□□ -0.05
PFDN5-203ENST00000351500 RAD54L2Q9Y4B4 1467 aa14.75□□□□□ -0.05
PFDN5-203ENST00000351500 CHD1O14646 1710 aa14.75□□□□□ -0.05
PFDN5-203ENST00000351500 CYB5RLQ6IPT4 315 aa14.73□□□□□ -0.05
PFDN5-203ENST00000351500 TDRD9Q8NDG6 1382 aaKnown RBP14.72□□□□□ -0.05
PFDN5-203ENST00000351500 TOP2BQ02880 1626 aa14.71□□□□□ -0.05
PFDN5-203ENST00000351500 SYNJ1O43426 1573 aa14.69□□□□□ -0.06
PFDN5-203ENST00000351500 SOGA1O94964 1423 aa14.68□□□□□ -0.06
PFDN5-203ENST00000351500 CUX1P39880 1505 aa14.68□□□□□ -0.06
PFDN5-203ENST00000351500 EEA1Q15075 1411 aa14.67□□□□□ -0.06
PFDN5-203ENST00000351500 FGD5Q6ZNL6 1462 aa14.67□□□□□ -0.06
PFDN5-203ENST00000351500 ARAP1Q96P48 1450 aa14.66□□□□□ -0.06
PFDN5-203ENST00000351500 BIVM-ERCC5R4GMW8 1640 aa14.66□□□□□ -0.06
PFDN5-203ENST00000351500 SNAPC4Q5SXM2 1469 aa14.65□□□□□ -0.06
PFDN5-203ENST00000351500 TRHP20396 242 aaPredicted RBP14.63□□□□□ -0.07
PFDN5-203ENST00000351500 CHMP7Q8WUX9 453 aaPredicted RBP14.6□□□□□ -0.07
PFDN5-203ENST00000351500 CSRNP3Q8WYN3 585 aa14.57□□□□□ -0.08
PFDN5-203ENST00000351500 FAM9AQ8IZU1 332 aaPredicted RBP14.56□□□□□ -0.08
PFDN5-203ENST00000351500 GRIN2BQ13224 1484 aa14.56□□□□□ -0.08
PFDN5-203ENST00000351500 KIF27Q86VH2 1401 aa14.55□□□□□ -0.08
PFDN5-203ENST00000351500 CLASP1Q7Z460 1538 aa14.55□□□□□ -0.08
PFDN5-203ENST00000351500 MAGI1Q96QZ7 1491 aaPredicted RBP14.54□□□□□ -0.08
PFDN5-203ENST00000351500 WDR97A6NE52 1622 aa14.52□□□□□ -0.09
PFDN5-203ENST00000351500 SYNJ2O15056 1496 aa14.51□□□□□ -0.09
PFDN5-203ENST00000351500 GAPVD1Q14C86 1478 aa14.5□□□□□ -0.09
PFDN5-203ENST00000351500 ABCA10Q8WWZ4 1543 aa14.5□□□□□ -0.09
PFDN5-203ENST00000351500 PBRM1Q86U86 1689 aa14.49□□□□□ -0.09
PFDN5-203ENST00000351500 RUSC2Q8N2Y8 1516 aa14.46□□□□□ -0.09
PFDN5-203ENST00000351500 LOC105371045A0A1W2PR82 267 aa14.44□□□□□ -0.1
PFDN5-203ENST00000351500 ABCA5Q8WWZ7 1642 aa14.44□□□□□ -0.1
PFDN5-203ENST00000351500 IGF1RP08069 1367 aa14.41□□□□□ -0.1
PFDN5-203ENST00000351500 ERCC6L2Q5T890 1561 aa14.39□□□□□ -0.11
PFDN5-203ENST00000351500 GOLGA3Q08378 1498 aa14.38□□□□□ -0.11
PFDN5-203ENST00000351500 GRIN2AQ12879 1464 aa14.38□□□□□ -0.11
PFDN5-203ENST00000351500 PRXQ9BXM0 1461 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms