RNA–Protein interactions for RNA: ENST00000351205.8

SMN1-201, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 900 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-201ENST00000351205 NISCHQ9Y2I1 1504 aa42.26■■■■■ 4.36
SMN1-201ENST00000351205 CCDC180Q9P1Z9 1646 aa37.91■■■■□ 3.66
SMN1-201ENST00000351205 ABCC9O60706 1549 aa37.81■■■■□ 3.64
SMN1-201ENST00000351205 RB1CC1Q8TDY2 1594 aa36.02■■■■□ 3.36
SMN1-201ENST00000351205 NACADO15069 1562 aa35.8■■■■□ 3.32
SMN1-201ENST00000351205 DCAF8L2P0C7V8 631 aa35.58■■■■□ 3.29
SMN1-201ENST00000351205 DNAJC5BQ9UF47 199 aa35.36■■■■□ 3.25
SMN1-201ENST00000351205 MYO15BQ96JP2 1530 aa35.32■■■■□ 3.25
SMN1-201ENST00000351205 UNC13AQ9UPW8 1703 aa35.28■■■■□ 3.24
SMN1-201ENST00000351205 PABPN1Q86U42 306 aaKnown RBP eCLIP35.18■■■■□ 3.22
SMN1-201ENST00000351205 ZCCHC6Q5VYS8 1495 aaKnown RBP35.06■■■■□ 3.2
SMN1-201ENST00000351205 BICRAQ9NZM4 1560 aa35■■■■□ 3.19
SMN1-201ENST00000351205 DCAF1Q9Y4B6 1507 aa34.91■■■■□ 3.18
SMN1-201ENST00000351205 SCRIBQ14160 1630 aa34.55■■■■□ 3.12
SMN1-201ENST00000351205 SHROOM4Q9ULL8 1493 aa34.5■■■■□ 3.11
SMN1-201ENST00000351205 CC2D2AQ9P2K1 1620 aa34.17■■■■□ 3.06
SMN1-201ENST00000351205 EIF4G1Q04637 1599 aaKnown RBP34.12■■■■□ 3.05
SMN1-201ENST00000351205 CECR2Q9BXF3 1484 aa34.04■■■■□ 3.04
SMN1-201ENST00000351205 NCAPD3P42695 1498 aa33.03■■■□□ 2.88
SMN1-201ENST00000351205 SMARCA4P51532 1647 aa32.97■■■□□ 2.87
SMN1-201ENST00000351205 ATAD2BQ9ULI0 1458 aa32.95■■■□□ 2.87
SMN1-201ENST00000351205 SMARCA2P51531 1590 aa32.87■■■□□ 2.85
SMN1-201ENST00000351205 HMGXB3Q12766 1538 aa32.82■■■□□ 2.84
SMN1-201ENST00000351205 BAZ1AQ9NRL2 1556 aaPredicted RBP32.8■■■□□ 2.84
SMN1-201ENST00000351205 BAZ1BQ9UIG0 1483 aaKnown RBP32.65■■■□□ 2.82
SMN1-201ENST00000351205 PEG3Q9GZU2 1588 aa32.64■■■□□ 2.82
SMN1-201ENST00000351205 ERCC6Q03468 1493 aa32.62■■■□□ 2.81
SMN1-201ENST00000351205 MROH2BQ7Z745 1585 aa32.57■■■□□ 2.8
SMN1-201ENST00000351205 CUX2O14529 1486 aa32.53■■■□□ 2.8
SMN1-201ENST00000351205 NESP48681 1621 aa32.51■■■□□ 2.79
SMN1-201ENST00000351205 DNAJC5Q9H3Z4 198 aa32.38■■■□□ 2.77
SMN1-201ENST00000351205 LAMC3Q9Y6N6 1575 aa32.29■■■□□ 2.76
SMN1-201ENST00000351205 WIZO95785 1651 aa32.21■■■□□ 2.75
SMN1-201ENST00000351205 THOC2Q8NI27 1593 aaKnown RBP32.19■■■□□ 2.74
SMN1-201ENST00000351205 KIF21AQ7Z4S6 1674 aa32.14■■■□□ 2.74
SMN1-201ENST00000351205 PDS5BQ9NTI5 1447 aa32.08■■■□□ 2.73
SMN1-201ENST00000351205 CADPSQ9ULU8 1353 aa32.02■■■□□ 2.72
SMN1-201ENST00000351205 RSF1Q96T23 1441 aaPredicted RBP31.92■■■□□ 2.7
SMN1-201ENST00000351205 MRC2Q9UBG0 1479 aa31.82■■■□□ 2.68
SMN1-201ENST00000351205 TOP2AP11388 1531 aaKnown RBP31.79■■■□□ 2.68
SMN1-201ENST00000351205 WDR62O43379 1518 aa31.75■■■□□ 2.67
SMN1-201ENST00000351205 CEP164Q9UPV0 1460 aa31.71■■■□□ 2.67
SMN1-201ENST00000351205 CFTRP13569 1480 aa31.7■■■□□ 2.66
SMN1-201ENST00000351205 FANCD2Q9BXW9 1451 aa31.68■■■□□ 2.66
SMN1-201ENST00000351205 PRDM2Q13029 1718 aa31.45■■■□□ 2.63
SMN1-201ENST00000351205 URB2Q14146 1524 aaKnown RBP31.43■■■□□ 2.62
SMN1-201ENST00000351205 CCDC88BA6NC98 1476 aa31.41■■■□□ 2.62
SMN1-201ENST00000351205 TOPBP1Q92547 1522 aa31.09■■■□□ 2.57
SMN1-201ENST00000351205 IFT140Q96RY7 1462 aa31.06■■■□□ 2.56
SMN1-201ENST00000351205 ZNF608Q9ULD9 1512 aaPredicted RBP31.03■■■□□ 2.56
SMN1-201ENST00000351205 OSCARQ8IYS5 282 aa31.02■■■□□ 2.56
SMN1-201ENST00000351205 TRIM41Q8WV44 630 aa31.02■■■□□ 2.56
SMN1-201ENST00000351205 ABCC8Q09428 1581 aa31■■■□□ 2.55
SMN1-201ENST00000351205 DNMBPQ6XZF7 1577 aa31■■■□□ 2.55
SMN1-201ENST00000351205 EIF4G3O43432 1585 aaKnown RBP30.88■■■□□ 2.53
SMN1-201ENST00000351205 TARBP1Q13395 1621 aaKnown RBP30.84■■■□□ 2.53
SMN1-201ENST00000351205 POLA1P09884 1462 aaPredicted RBP30.79■■■□□ 2.52
SMN1-201ENST00000351205 AQRO60306 1485 aaKnown RBP eCLIP30.74■■■□□ 2.51
SMN1-201ENST00000351205 RIMBP3CA6NJZ7 1639 aa30.68■■■□□ 2.5
SMN1-201ENST00000351205 RIMBP3BA6NNM3 1639 aa30.68■■■□□ 2.5
SMN1-201ENST00000351205 RIMBP3Q9UFD9 1639 aa30.68■■■□□ 2.5
SMN1-201ENST00000351205 RAD54L2Q9Y4B4 1467 aa30.67■■■□□ 2.5
SMN1-201ENST00000351205 CHD1O14646 1710 aa30.65■■■□□ 2.5
SMN1-201ENST00000351205 SOGA1O94964 1423 aa30.62■■■□□ 2.49
SMN1-201ENST00000351205 FGD5Q6ZNL6 1462 aa30.61■■■□□ 2.49
SMN1-201ENST00000351205 CUX1P39880 1505 aa30.61■■■□□ 2.49
SMN1-201ENST00000351205 ARHGEF11O15085 1522 aa30.58■■■□□ 2.49
SMN1-201ENST00000351205 TDRD9Q8NDG6 1382 aaKnown RBP30.55■■■□□ 2.48
SMN1-201ENST00000351205 SUPT5HO00267 1087 aaKnown RBP30.54■■■□□ 2.48
SMN1-201ENST00000351205 WDR97A6NE52 1622 aa30.51■■■□□ 2.48
SMN1-201ENST00000351205 FBLN2P98095 1184 aa30.49■■■□□ 2.47
SMN1-201ENST00000351205 SNAPC4Q5SXM2 1469 aa30.44■■■□□ 2.46
SMN1-201ENST00000351205 GRIN2BQ13224 1484 aa30.36■■■□□ 2.45
SMN1-201ENST00000351205 MAGI1Q96QZ7 1491 aaPredicted RBP30.35■■■□□ 2.45
SMN1-201ENST00000351205 CYB5RLQ6IPT4 315 aa30.31■■■□□ 2.44
SMN1-201ENST00000351205 PBRM1Q86U86 1689 aa30.3■■■□□ 2.44
SMN1-201ENST00000351205 ARAP1Q96P48 1450 aa30.29■■■□□ 2.44
SMN1-201ENST00000351205 CLASP1Q7Z460 1538 aa30.27■■■□□ 2.44
SMN1-201ENST00000351205 GAPVD1Q14C86 1478 aa30.27■■■□□ 2.44
SMN1-201ENST00000351205 CHMP7Q8WUX9 453 aaPredicted RBP30.27■■■□□ 2.44
SMN1-201ENST00000351205 ABCA10Q8WWZ4 1543 aa30.26■■■□□ 2.43
SMN1-201ENST00000351205 SYNJ2O15056 1496 aa30.25■■■□□ 2.43
SMN1-201ENST00000351205 SYNJ1O43426 1573 aa30.25■■■□□ 2.43
SMN1-201ENST00000351205 ABCA5Q8WWZ7 1642 aa30.24■■■□□ 2.43
SMN1-201ENST00000351205 BIVM-ERCC5R4GMW8 1640 aa30.15■■■□□ 2.42
SMN1-201ENST00000351205 TOP2BQ02880 1626 aa30.14■■■□□ 2.41
SMN1-201ENST00000351205 WRNQ14191 1432 aaPredicted RBP eCLIP30.13■■■□□ 2.41
SMN1-201ENST00000351205 ADAMTS12P58397 1594 aa30■■■□□ 2.39
SMN1-201ENST00000351205 GRIN2AQ12879 1464 aa29.98■■■□□ 2.39
SMN1-201ENST00000351205 TRHP20396 242 aaPredicted RBP29.93■■■□□ 2.38
SMN1-201ENST00000351205 CEP170Q5SW79 1584 aa29.89■■■□□ 2.38
SMN1-201ENST00000351205 ERICH3Q5RHP9 1530 aa29.88■■■□□ 2.37
SMN1-201ENST00000351205 FHAD1B1AJZ9 1412 aa29.88■■■□□ 2.37
SMN1-201ENST00000351205 NUP160Q12769 1436 aa29.88■■■□□ 2.37
SMN1-201ENST00000351205 ERCC6L2Q5T890 1561 aa29.81■■■□□ 2.36
SMN1-201ENST00000351205 SHROOM2Q13796 1616 aa29.75■■■□□ 2.35
SMN1-201ENST00000351205 RUSC2Q8N2Y8 1516 aa29.59■■■□□ 2.33
SMN1-201ENST00000351205 PRG4Q92954 1404 aaPredicted RBP29.56■■■□□ 2.32
SMN1-201ENST00000351205 JPH4Q96JJ6 628 aa29.52■■■□□ 2.32
SMN1-201ENST00000351205 KIF27Q86VH2 1401 aa29.52■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms