RNA–Protein interactions for RNA: ENST00000347404.9

KITLG-202, Transcript of KIT ligand, humanhuman

TSL 1 (best) BASIC

Gene KITLG, Length 1,948 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KITLG-202ENST00000347404 NISCHQ9Y2I1 1504 aa30.98■■■□□ 2.55
KITLG-202ENST00000347404 SHROOM4Q9ULL8 1493 aa26.5■■□□□ 1.83
KITLG-202ENST00000347404 ZCCHC6Q5VYS8 1495 aaKnown RBP26.34■■□□□ 1.81
KITLG-202ENST00000347404 SUPT5HO00267 1087 aaKnown RBP26.33■■□□□ 1.81
KITLG-202ENST00000347404 CCDC180Q9P1Z9 1646 aa26.26■■□□□ 1.8
KITLG-202ENST00000347404 HRCP23327 699 aa26.26■■□□□ 1.79
KITLG-202ENST00000347404 CHIC1Q5VXU3 224 aa25.96■■□□□ 1.75
KITLG-202ENST00000347404 MYO15BQ96JP2 1530 aa25.88■■□□□ 1.73
KITLG-202ENST00000347404 DCAF1Q9Y4B6 1507 aa25.76■■□□□ 1.71
KITLG-202ENST00000347404 PCGF6Q9BYE7 350 aa25.69■■□□□ 1.7
KITLG-202ENST00000347404 ABCC9O60706 1549 aa25.37■■□□□ 1.65
KITLG-202ENST00000347404 TRIM26Q12899 539 aaPredicted RBP25.3■■□□□ 1.64
KITLG-202ENST00000347404 PPARGC1BQ86YN6 1023 aaKnown RBP25.25■■□□□ 1.63
KITLG-202ENST00000347404 ZEB1P37275 1124 aaPredicted RBP25.25■■□□□ 1.63
KITLG-202ENST00000347404 DCAF8L2P0C7V8 631 aa25.24■■□□□ 1.63
KITLG-202ENST00000347404 PELP1Q8IZL8 1130 aaKnown RBP25.22■■□□□ 1.63
KITLG-202ENST00000347404 LOC105371045A0A1W2PR82 267 aa25.02■■□□□ 1.6
KITLG-202ENST00000347404 TRIM41Q8WV44 630 aa24.66■■□□□ 1.54
KITLG-202ENST00000347404 RSF1Q96T23 1441 aaPredicted RBP24.65■■□□□ 1.54
KITLG-202ENST00000347404 RB1CC1Q8TDY2 1594 aa24.64■■□□□ 1.53
KITLG-202ENST00000347404 NACADO15069 1562 aa24.56■■□□□ 1.52
KITLG-202ENST00000347404 SCRIBQ14160 1630 aa24.44■■□□□ 1.5
KITLG-202ENST00000347404 SCAF1Q9H7N4 1312 aaKnown RBP24.4■■□□□ 1.5
KITLG-202ENST00000347404 MYT1Q01538 1121 aa24.31■■□□□ 1.48
KITLG-202ENST00000347404 FAM9AQ8IZU1 332 aaPredicted RBP24.23■■□□□ 1.47
KITLG-202ENST00000347404 CENPBP07199 599 aaPredicted RBP24.16■■□□□ 1.46
KITLG-202ENST00000347404 ACIN1Q9UKV3 1341 aaKnown RBP24.16■■□□□ 1.46
KITLG-202ENST00000347404 CCER1Q8TC90 406 aaPredicted RBP24.1■■□□□ 1.45
KITLG-202ENST00000347404 BAZ1AQ9NRL2 1556 aaPredicted RBP23.99■■□□□ 1.43
KITLG-202ENST00000347404 WRNQ14191 1432 aaPredicted RBP eCLIP23.98■■□□□ 1.43
KITLG-202ENST00000347404 MROH2BQ7Z745 1585 aa23.98■■□□□ 1.43
KITLG-202ENST00000347404 DIEXFQ68CQ4 756 aaKnown RBP23.94■■□□□ 1.42
KITLG-202ENST00000347404 UNC13AQ9UPW8 1703 aa23.92■■□□□ 1.42
KITLG-202ENST00000347404 PABPN1Q86U42 306 aaKnown RBP eCLIP23.92■■□□□ 1.42
KITLG-202ENST00000347404 CECR2Q9BXF3 1484 aa23.91■■□□□ 1.42
KITLG-202ENST00000347404 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.91■■□□□ 1.42
KITLG-202ENST00000347404 EIF4G1Q04637 1599 aaKnown RBP23.91■■□□□ 1.42
KITLG-202ENST00000347404 NEUROD1Q13562 356 aa23.89■■□□□ 1.42
KITLG-202ENST00000347404 WIZO95785 1651 aa23.89■■□□□ 1.41
KITLG-202ENST00000347404 EHMT2Q96KQ7 1210 aa23.85■■□□□ 1.41
KITLG-202ENST00000347404 GTF3C3Q9Y5Q9 886 aa23.8■■□□□ 1.4
KITLG-202ENST00000347404 EEA1Q15075 1411 aa23.79■■□□□ 1.4
KITLG-202ENST00000347404 BICRAQ9NZM4 1560 aa23.78■■□□□ 1.4
KITLG-202ENST00000347404 TNIKQ9UKE5 1360 aa23.73■■□□□ 1.39
KITLG-202ENST00000347404 CEP162Q5TB80 1403 aa23.72■■□□□ 1.39
KITLG-202ENST00000347404 TOP2AP11388 1531 aaKnown RBP23.71■■□□□ 1.39
KITLG-202ENST00000347404 ZNF316A6NFI3 1004 aaPredicted RBP23.66■■□□□ 1.38
KITLG-202ENST00000347404 CCDC88BA6NC98 1476 aa23.54■■□□□ 1.36
KITLG-202ENST00000347404 GOLGA3Q08378 1498 aa23.52■■□□□ 1.36
KITLG-202ENST00000347404 ABCC8Q09428 1581 aa23.51■■□□□ 1.35
KITLG-202ENST00000347404 SMARCA2P51531 1590 aa23.5■■□□□ 1.35
KITLG-202ENST00000347404 SMARCA4P51532 1647 aa23.48■■□□□ 1.35
KITLG-202ENST00000347404 CSRNP3Q8WYN3 585 aa23.46■■□□□ 1.35
KITLG-202ENST00000347404 CLSPNQ9HAW4 1339 aa23.42■■□□□ 1.34
KITLG-202ENST00000347404 SOGA1O94964 1423 aa23.4■■□□□ 1.34
KITLG-202ENST00000347404 UBTFP17480 764 aaKnown RBP23.39■■□□□ 1.33
KITLG-202ENST00000347404 CEP164Q9UPV0 1460 aa23.34■■□□□ 1.33
KITLG-202ENST00000347404 KIF21BO75037 1637 aa23.33■■□□□ 1.33
KITLG-202ENST00000347404 TTBK1Q5TCY1 1321 aaPredicted RBP23.31■■□□□ 1.32
KITLG-202ENST00000347404 BAZ1BQ9UIG0 1483 aaKnown RBP23.24■■□□□ 1.31
KITLG-202ENST00000347404 YTHDC1Q96MU7 727 aaKnown RBP23.24■■□□□ 1.31
KITLG-202ENST00000347404 VPS8Q8N3P4 1428 aa23.21■■□□□ 1.31
KITLG-202ENST00000347404 APLP2Q06481 763 aa23.2■■□□□ 1.3
KITLG-202ENST00000347404 MIER1Q8N108 512 aa23.2■■□□□ 1.3
KITLG-202ENST00000347404 CLIP1P30622 1438 aa23.19■■□□□ 1.3
KITLG-202ENST00000347404 RUSC2Q8N2Y8 1516 aa23.16■■□□□ 1.3
KITLG-202ENST00000347404 HNRNPUL2Q1KMD3 747 aaKnown RBP23.1■■□□□ 1.29
KITLG-202ENST00000347404 PEG3Q9GZU2 1588 aa23.09■■□□□ 1.29
KITLG-202ENST00000347404 SYNJ1O43426 1573 aa23■■□□□ 1.27
KITLG-202ENST00000347404 ERICH3Q5RHP9 1530 aa22.89■■□□□ 1.25
KITLG-202ENST00000347404 ATAD2BQ9ULI0 1458 aa22.88■■□□□ 1.25
KITLG-202ENST00000347404 RAPGEF2Q9Y4G8 1499 aa22.87■■□□□ 1.25
KITLG-202ENST00000347404 CC2D2AQ9P2K1 1620 aa22.87■■□□□ 1.25
KITLG-202ENST00000347404 DHX57Q6P158 1386 aaKnown RBP22.87■■□□□ 1.25
KITLG-202ENST00000347404 DNAJC5BQ9UF47 199 aa22.84■■□□□ 1.25
KITLG-202ENST00000347404 SUPT16HQ9Y5B9 1047 aaKnown RBP22.82■■□□□ 1.24
KITLG-202ENST00000347404 TOP2BQ02880 1626 aa22.8■■□□□ 1.24
KITLG-202ENST00000347404 CUX2O14529 1486 aa22.78■■□□□ 1.24
KITLG-202ENST00000347404 RRBP1Q9P2E9 1410 aaKnown RBP22.76■■□□□ 1.23
KITLG-202ENST00000347404 BIVM-ERCC5R4GMW8 1640 aa22.73■■□□□ 1.23
KITLG-202ENST00000347404 NCAPD3P42695 1498 aa22.72■■□□□ 1.23
KITLG-202ENST00000347404 PRXQ9BXM0 1461 aa22.69■■□□□ 1.22
KITLG-202ENST00000347404 ARAP1Q96P48 1450 aa22.68■■□□□ 1.22
KITLG-202ENST00000347404 HMGXB3Q12766 1538 aa22.6■■□□□ 1.21
KITLG-202ENST00000347404 CCNB3Q8WWL7 1395 aa22.6■■□□□ 1.21
KITLG-202ENST00000347404 ANP32EQ9BTT0 268 aa22.6■■□□□ 1.21
KITLG-202ENST00000347404 TSHZ2Q9NRE2 1034 aa22.57■■□□□ 1.2
KITLG-202ENST00000347404 KIF27Q86VH2 1401 aa22.53■■□□□ 1.2
KITLG-202ENST00000347404 MAP3K1Q13233 1512 aa22.52■■□□□ 1.19
KITLG-202ENST00000347404 RANGAP1P46060 587 aaPredicted RBP22.51■■□□□ 1.19
KITLG-202ENST00000347404 KANK4Q5T7N3 995 aaPredicted RBP22.47■■□□□ 1.19
KITLG-202ENST00000347404 TIMELESSQ9UNS1 1208 aa22.47■■□□□ 1.19
KITLG-202ENST00000347404 NEFLP07196 543 aa22.43■■□□□ 1.18
KITLG-202ENST00000347404 RAB3GAP2Q9H2M9 1393 aa22.39■■□□□ 1.18
KITLG-202ENST00000347404 ARHGAP35Q9NRY4 1499 aa22.39■■□□□ 1.17
KITLG-202ENST00000347404 MAPKBP1O60336 1514 aa22.38■■□□□ 1.17
KITLG-202ENST00000347404 SETD5Q9C0A6 1442 aa22.38■■□□□ 1.17
KITLG-202ENST00000347404 TIAM1Q13009 1591 aa22.35■■□□□ 1.17
KITLG-202ENST00000347404 CCER2I3L3R5 266 aa22.34■■□□□ 1.17
KITLG-202ENST00000347404 CUX1P39880 1505 aa22.33■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 118.4 ms