RNA–Protein interactions for RNA: ENST00000346855.7

UBE2E1-202, Transcript of ubiquitin conjugating enzyme E2 E1, humanhuman

TSL 3 BASIC

Gene UBE2E1, Length 1,398 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E1-202ENST00000346855 NISCHQ9Y2I1 1504 aa43.61■■■■■ 4.57
UBE2E1-202ENST00000346855 CCDC180Q9P1Z9 1646 aa38.61■■■■□ 3.77
UBE2E1-202ENST00000346855 ABCC9O60706 1549 aa37.09■■■■□ 3.53
UBE2E1-202ENST00000346855 ZCCHC6Q5VYS8 1495 aaKnown RBP36.49■■■■□ 3.43
UBE2E1-202ENST00000346855 DCAF1Q9Y4B6 1507 aa36.14■■■■□ 3.38
UBE2E1-202ENST00000346855 NACADO15069 1562 aa36.08■■■■□ 3.37
UBE2E1-202ENST00000346855 MYO15BQ96JP2 1530 aa36.07■■■■□ 3.36
UBE2E1-202ENST00000346855 DCAF8L2P0C7V8 631 aa36.01■■■■□ 3.35
UBE2E1-202ENST00000346855 RB1CC1Q8TDY2 1594 aa35.99■■■■□ 3.35
UBE2E1-202ENST00000346855 UNC13AQ9UPW8 1703 aa35.32■■■■□ 3.24
UBE2E1-202ENST00000346855 SCRIBQ14160 1630 aa35.23■■■■□ 3.23
UBE2E1-202ENST00000346855 BICRAQ9NZM4 1560 aa34.91■■■■□ 3.18
UBE2E1-202ENST00000346855 SHROOM4Q9ULL8 1493 aa34.71■■■■□ 3.15
UBE2E1-202ENST00000346855 PABPN1Q86U42 306 aaKnown RBP eCLIP34.67■■■■□ 3.14
UBE2E1-202ENST00000346855 EIF4G1Q04637 1599 aaKnown RBP33.91■■■■□ 3.02
UBE2E1-202ENST00000346855 CECR2Q9BXF3 1484 aa33.89■■■■□ 3.02
UBE2E1-202ENST00000346855 BAZ1AQ9NRL2 1556 aaPredicted RBP33.77■■■■□ 3
UBE2E1-202ENST00000346855 SMARCA4P51532 1647 aa33.77■■■■□ 3
UBE2E1-202ENST00000346855 CC2D2AQ9P2K1 1620 aa33.63■■■□□ 2.97
UBE2E1-202ENST00000346855 MROH2BQ7Z745 1585 aa33.62■■■□□ 2.97
UBE2E1-202ENST00000346855 DNAJC5BQ9UF47 199 aa33.44■■■□□ 2.94
UBE2E1-202ENST00000346855 PEG3Q9GZU2 1588 aa33.43■■■□□ 2.94
UBE2E1-202ENST00000346855 RSF1Q96T23 1441 aaPredicted RBP33.4■■■□□ 2.94
UBE2E1-202ENST00000346855 SMARCA2P51531 1590 aa33.38■■■□□ 2.93
UBE2E1-202ENST00000346855 ATAD2BQ9ULI0 1458 aa33.37■■■□□ 2.93
UBE2E1-202ENST00000346855 WIZO95785 1651 aa33.34■■■□□ 2.93
UBE2E1-202ENST00000346855 NCAPD3P42695 1498 aa33.24■■■□□ 2.91
UBE2E1-202ENST00000346855 HMGXB3Q12766 1538 aa33.21■■■□□ 2.91
UBE2E1-202ENST00000346855 BAZ1BQ9UIG0 1483 aaKnown RBP33.13■■■□□ 2.89
UBE2E1-202ENST00000346855 TOP2AP11388 1531 aaKnown RBP33■■■□□ 2.87
UBE2E1-202ENST00000346855 SUPT5HO00267 1087 aaKnown RBP32.9■■■□□ 2.86
UBE2E1-202ENST00000346855 CCDC88BA6NC98 1476 aa32.55■■■□□ 2.8
UBE2E1-202ENST00000346855 LAMC3Q9Y6N6 1575 aa32.34■■■□□ 2.77
UBE2E1-202ENST00000346855 NESP48681 1621 aa32.29■■■□□ 2.76
UBE2E1-202ENST00000346855 CADPSQ9ULU8 1353 aa32.28■■■□□ 2.76
UBE2E1-202ENST00000346855 CFTRP13569 1480 aa32.25■■■□□ 2.75
UBE2E1-202ENST00000346855 PRDM2Q13029 1718 aa32.24■■■□□ 2.75
UBE2E1-202ENST00000346855 KIF21AQ7Z4S6 1674 aa32.03■■■□□ 2.72
UBE2E1-202ENST00000346855 PDS5BQ9NTI5 1447 aa32.01■■■□□ 2.71
UBE2E1-202ENST00000346855 FANCD2Q9BXW9 1451 aa31.95■■■□□ 2.71
UBE2E1-202ENST00000346855 ERCC6Q03468 1493 aa31.91■■■□□ 2.7
UBE2E1-202ENST00000346855 CEP164Q9UPV0 1460 aa31.86■■■□□ 2.69
UBE2E1-202ENST00000346855 THOC2Q8NI27 1593 aaKnown RBP31.76■■■□□ 2.67
UBE2E1-202ENST00000346855 MRC2Q9UBG0 1479 aa31.69■■■□□ 2.66
UBE2E1-202ENST00000346855 WDR62O43379 1518 aa31.62■■■□□ 2.65
UBE2E1-202ENST00000346855 URB2Q14146 1524 aaKnown RBP31.62■■■□□ 2.65
UBE2E1-202ENST00000346855 ABCC8Q09428 1581 aa31.59■■■□□ 2.65
UBE2E1-202ENST00000346855 DNMBPQ6XZF7 1577 aa31.57■■■□□ 2.64
UBE2E1-202ENST00000346855 TOPBP1Q92547 1522 aa31.53■■■□□ 2.64
UBE2E1-202ENST00000346855 CUX1P39880 1505 aa31.51■■■□□ 2.64
UBE2E1-202ENST00000346855 WRNQ14191 1432 aaPredicted RBP eCLIP31.49■■■□□ 2.63
UBE2E1-202ENST00000346855 BIVM-ERCC5R4GMW8 1640 aa31.46■■■□□ 2.63
UBE2E1-202ENST00000346855 SYNJ1O43426 1573 aa31.45■■■□□ 2.63
UBE2E1-202ENST00000346855 TOP2BQ02880 1626 aa31.42■■■□□ 2.62
UBE2E1-202ENST00000346855 CUX2O14529 1486 aa31.4■■■□□ 2.62
UBE2E1-202ENST00000346855 FGD5Q6ZNL6 1462 aa31.3■■■□□ 2.6
UBE2E1-202ENST00000346855 POLA1P09884 1462 aaPredicted RBP31.29■■■□□ 2.6
UBE2E1-202ENST00000346855 TARBP1Q13395 1621 aaKnown RBP31.18■■■□□ 2.58
UBE2E1-202ENST00000346855 IFT140Q96RY7 1462 aa31.16■■■□□ 2.58
UBE2E1-202ENST00000346855 WDR97A6NE52 1622 aa31.15■■■□□ 2.58
UBE2E1-202ENST00000346855 RAD54L2Q9Y4B4 1467 aa31.12■■■□□ 2.57
UBE2E1-202ENST00000346855 SOGA1O94964 1423 aa31.11■■■□□ 2.57
UBE2E1-202ENST00000346855 CHIC1Q5VXU3 224 aa31.08■■■□□ 2.57
UBE2E1-202ENST00000346855 TRIM41Q8WV44 630 aa31.05■■■□□ 2.56
UBE2E1-202ENST00000346855 ABCA10Q8WWZ4 1543 aa31.03■■■□□ 2.56
UBE2E1-202ENST00000346855 ZNF608Q9ULD9 1512 aaPredicted RBP30.97■■■□□ 2.55
UBE2E1-202ENST00000346855 EIF4G3O43432 1585 aaKnown RBP30.96■■■□□ 2.55
UBE2E1-202ENST00000346855 ABCA5Q8WWZ7 1642 aa30.93■■■□□ 2.54
UBE2E1-202ENST00000346855 TDRD9Q8NDG6 1382 aaKnown RBP30.85■■■□□ 2.53
UBE2E1-202ENST00000346855 AQRO60306 1485 aaKnown RBP eCLIP30.84■■■□□ 2.532e-9■■■■□ 26.7
UBE2E1-202ENST00000346855 PBRM1Q86U86 1689 aa30.83■■■□□ 2.53
UBE2E1-202ENST00000346855 GAPVD1Q14C86 1478 aa30.8■■■□□ 2.52
UBE2E1-202ENST00000346855 KIF27Q86VH2 1401 aa30.76■■■□□ 2.52
UBE2E1-202ENST00000346855 GRIN2BQ13224 1484 aa30.72■■■□□ 2.51
UBE2E1-202ENST00000346855 RUSC2Q8N2Y8 1516 aa30.69■■■□□ 2.5
UBE2E1-202ENST00000346855 ERICH3Q5RHP9 1530 aa30.68■■■□□ 2.5
UBE2E1-202ENST00000346855 SNAPC4Q5SXM2 1469 aa30.62■■■□□ 2.49
UBE2E1-202ENST00000346855 MAGI1Q96QZ7 1491 aaPredicted RBP30.59■■■□□ 2.49
UBE2E1-202ENST00000346855 EEA1Q15075 1411 aa30.59■■■□□ 2.49
UBE2E1-202ENST00000346855 ADAMTS12P58397 1594 aa30.57■■■□□ 2.48
UBE2E1-202ENST00000346855 CUL7Q14999 1698 aa30.57■■■□□ 2.48
UBE2E1-202ENST00000346855 IGF1RP08069 1367 aa30.54■■■□□ 2.48
UBE2E1-202ENST00000346855 CHD1O14646 1710 aa30.49■■■□□ 2.47
UBE2E1-202ENST00000346855 SYNJ2O15056 1496 aa30.46■■■□□ 2.47
UBE2E1-202ENST00000346855 FHAD1B1AJZ9 1412 aa30.46■■■□□ 2.47
UBE2E1-202ENST00000346855 CARMIL1Q5VZK9 1371 aa30.38■■■□□ 2.45
UBE2E1-202ENST00000346855 FAM9AQ8IZU1 332 aaPredicted RBP30.38■■■□□ 2.45
UBE2E1-202ENST00000346855 CSRNP3Q8WYN3 585 aa30.37■■■□□ 2.45
UBE2E1-202ENST00000346855 PRXQ9BXM0 1461 aa30.35■■■□□ 2.45
UBE2E1-202ENST00000346855 GRIN2AQ12879 1464 aa30.35■■■□□ 2.45
UBE2E1-202ENST00000346855 KIF21BO75037 1637 aa30.3■■■□□ 2.44
UBE2E1-202ENST00000346855 RAPGEF2Q9Y4G8 1499 aa30.3■■■□□ 2.44
UBE2E1-202ENST00000346855 CHMP7Q8WUX9 453 aaPredicted RBP30.29■■■□□ 2.44
UBE2E1-202ENST00000346855 FBLN2P98095 1184 aa30.27■■■□□ 2.44
UBE2E1-202ENST00000346855 CEP170Q5SW79 1584 aa30.21■■■□□ 2.43
UBE2E1-202ENST00000346855 NUP160Q12769 1436 aa30.18■■■□□ 2.42
UBE2E1-202ENST00000346855 CTTNBP2Q8WZ74 1663 aa30.13■■■□□ 2.41
UBE2E1-202ENST00000346855 CLASP1Q7Z460 1538 aa30.12■■■□□ 2.41
UBE2E1-202ENST00000346855 GOLGA3Q08378 1498 aa30.11■■■□□ 2.41
UBE2E1-202ENST00000346855 OSCARQ8IYS5 282 aa30.08■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms