RNA–Protein interactions for RNA: ENST00000346606.10

CSHL1-203, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 1 (best) BASIC

Gene CSHL1, Length 659 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-203ENST00000346606 NISCHQ9Y2I1 1504 aa37.1■■■■□ 3.53
CSHL1-203ENST00000346606 ABCC9O60706 1549 aa33.9■■■■□ 3.02
CSHL1-203ENST00000346606 CCDC180Q9P1Z9 1646 aa33.31■■■□□ 2.92
CSHL1-203ENST00000346606 DNAJC5BQ9UF47 199 aa32.31■■■□□ 2.76
CSHL1-203ENST00000346606 RB1CC1Q8TDY2 1594 aa31.97■■■□□ 2.71
CSHL1-203ENST00000346606 NACADO15069 1562 aa31.68■■■□□ 2.66
CSHL1-203ENST00000346606 PABPN1Q86U42 306 aaKnown RBP eCLIP31.58■■■□□ 2.65
CSHL1-203ENST00000346606 DCAF8L2P0C7V8 631 aa31.55■■■□□ 2.64
CSHL1-203ENST00000346606 UNC13AQ9UPW8 1703 aa31.17■■■□□ 2.58
CSHL1-203ENST00000346606 BICRAQ9NZM4 1560 aa31.14■■■□□ 2.58
CSHL1-203ENST00000346606 MYO15BQ96JP2 1530 aa31.12■■■□□ 2.57
CSHL1-203ENST00000346606 ZCCHC6Q5VYS8 1495 aaKnown RBP30.65■■■□□ 2.5
CSHL1-203ENST00000346606 SHROOM4Q9ULL8 1493 aa30.58■■■□□ 2.49
CSHL1-203ENST00000346606 DCAF1Q9Y4B6 1507 aa30.57■■■□□ 2.49
CSHL1-203ENST00000346606 CECR2Q9BXF3 1484 aa30.56■■■□□ 2.48
CSHL1-203ENST00000346606 CC2D2AQ9P2K1 1620 aa30.54■■■□□ 2.48
CSHL1-203ENST00000346606 SCRIBQ14160 1630 aa30.43■■■□□ 2.46
CSHL1-203ENST00000346606 EIF4G1Q04637 1599 aaKnown RBP30.38■■■□□ 2.45
CSHL1-203ENST00000346606 DNAJC5Q9H3Z4 198 aa29.88■■■□□ 2.37
CSHL1-203ENST00000346606 NCAPD3P42695 1498 aa29.34■■■□□ 2.29
CSHL1-203ENST00000346606 CUX2O14529 1486 aa29.31■■■□□ 2.28
CSHL1-203ENST00000346606 ERCC6Q03468 1493 aa29.23■■■□□ 2.27
CSHL1-203ENST00000346606 ATAD2BQ9ULI0 1458 aa29.2■■■□□ 2.26
CSHL1-203ENST00000346606 NESP48681 1621 aa29.02■■■□□ 2.24
CSHL1-203ENST00000346606 HMGXB3Q12766 1538 aa28.99■■■□□ 2.23
CSHL1-203ENST00000346606 SMARCA2P51531 1590 aa28.98■■■□□ 2.23
CSHL1-203ENST00000346606 SMARCA4P51532 1647 aa28.97■■■□□ 2.23
CSHL1-203ENST00000346606 BAZ1BQ9UIG0 1483 aaKnown RBP28.83■■■□□ 2.21
CSHL1-203ENST00000346606 BAZ1AQ9NRL2 1556 aaPredicted RBP28.76■■■□□ 2.19
CSHL1-203ENST00000346606 THOC2Q8NI27 1593 aaKnown RBP28.71■■■□□ 2.19
CSHL1-203ENST00000346606 PEG3Q9GZU2 1588 aa28.71■■■□□ 2.19
CSHL1-203ENST00000346606 LAMC3Q9Y6N6 1575 aa28.63■■■□□ 2.17
CSHL1-203ENST00000346606 MROH2BQ7Z745 1585 aa28.62■■■□□ 2.17
CSHL1-203ENST00000346606 PDS5BQ9NTI5 1447 aa28.54■■■□□ 2.16
CSHL1-203ENST00000346606 KIF21AQ7Z4S6 1674 aa28.48■■■□□ 2.15
CSHL1-203ENST00000346606 CADPSQ9ULU8 1353 aa28.44■■■□□ 2.14
CSHL1-203ENST00000346606 TRIM41Q8WV44 630 aa28.38■■■□□ 2.13
CSHL1-203ENST00000346606 MRC2Q9UBG0 1479 aa28.32■■■□□ 2.12
CSHL1-203ENST00000346606 WDR62O43379 1518 aa28.25■■■□□ 2.11
CSHL1-203ENST00000346606 WIZO95785 1651 aa28.18■■■□□ 2.1
CSHL1-203ENST00000346606 CEP164Q9UPV0 1460 aa28.1■■■□□ 2.09
CSHL1-203ENST00000346606 FANCD2Q9BXW9 1451 aa28.08■■■□□ 2.09
CSHL1-203ENST00000346606 CFTRP13569 1480 aa28.01■■■□□ 2.07
CSHL1-203ENST00000346606 OSCARQ8IYS5 282 aa27.98■■■□□ 2.07
CSHL1-203ENST00000346606 RSF1Q96T23 1441 aaPredicted RBP27.9■■■□□ 2.06
CSHL1-203ENST00000346606 URB2Q14146 1524 aaKnown RBP27.89■■■□□ 2.06
CSHL1-203ENST00000346606 TOP2AP11388 1531 aaKnown RBP27.79■■■□□ 2.04
CSHL1-203ENST00000346606 ZNF608Q9ULD9 1512 aaPredicted RBP27.65■■■□□ 2.02
CSHL1-203ENST00000346606 RIMBP3CA6NJZ7 1639 aa27.58■■■□□ 2.01
CSHL1-203ENST00000346606 RIMBP3BA6NNM3 1639 aa27.58■■■□□ 2.01
CSHL1-203ENST00000346606 RIMBP3Q9UFD9 1639 aa27.58■■■□□ 2.01
CSHL1-203ENST00000346606 IFT140Q96RY7 1462 aa27.57■■■□□ 2
CSHL1-203ENST00000346606 CCDC88BA6NC98 1476 aa27.57■■■□□ 2
CSHL1-203ENST00000346606 TOPBP1Q92547 1522 aa27.5■■□□□ 1.99
CSHL1-203ENST00000346606 ARHGEF11O15085 1522 aa27.49■■□□□ 1.99
CSHL1-203ENST00000346606 PRDM2Q13029 1718 aa27.44■■□□□ 1.98
CSHL1-203ENST00000346606 CYB5RLQ6IPT4 315 aa27.39■■□□□ 1.98
CSHL1-203ENST00000346606 EIF4G3O43432 1585 aaKnown RBP27.35■■□□□ 1.97
CSHL1-203ENST00000346606 AQRO60306 1485 aaKnown RBP eCLIP27.35■■□□□ 1.97
CSHL1-203ENST00000346606 ABCC8Q09428 1581 aa27.35■■□□□ 1.97
CSHL1-203ENST00000346606 DNMBPQ6XZF7 1577 aa27.31■■□□□ 1.96
CSHL1-203ENST00000346606 TARBP1Q13395 1621 aaKnown RBP27.26■■□□□ 1.95
CSHL1-203ENST00000346606 FBLN2P98095 1184 aa27.23■■□□□ 1.95
CSHL1-203ENST00000346606 ARAP1Q96P48 1450 aa27.23■■□□□ 1.95
CSHL1-203ENST00000346606 POLA1P09884 1462 aaPredicted RBP27.2■■□□□ 1.95
CSHL1-203ENST00000346606 CHD1O14646 1710 aa27.17■■□□□ 1.94
CSHL1-203ENST00000346606 TRHP20396 242 aaPredicted RBP27.16■■□□□ 1.94
CSHL1-203ENST00000346606 RAD54L2Q9Y4B4 1467 aa27.15■■□□□ 1.94
CSHL1-203ENST00000346606 TDRD9Q8NDG6 1382 aaKnown RBP27.12■■□□□ 1.93
CSHL1-203ENST00000346606 SOGA1O94964 1423 aa27.08■■□□□ 1.93
CSHL1-203ENST00000346606 SNAPC4Q5SXM2 1469 aa27■■□□□ 1.91
CSHL1-203ENST00000346606 FGD5Q6ZNL6 1462 aa26.96■■□□□ 1.91
CSHL1-203ENST00000346606 CLASP1Q7Z460 1538 aa26.95■■□□□ 1.91
CSHL1-203ENST00000346606 CHMP7Q8WUX9 453 aaPredicted RBP26.95■■□□□ 1.9
CSHL1-203ENST00000346606 CUX1P39880 1505 aa26.89■■□□□ 1.89
CSHL1-203ENST00000346606 MAGI1Q96QZ7 1491 aaPredicted RBP26.87■■□□□ 1.89
CSHL1-203ENST00000346606 GRIN2BQ13224 1484 aa26.86■■□□□ 1.89
CSHL1-203ENST00000346606 WDR97A6NE52 1622 aa26.85■■□□□ 1.89
CSHL1-203ENST00000346606 SYNJ1O43426 1573 aa26.83■■□□□ 1.89
CSHL1-203ENST00000346606 SYNJ2O15056 1496 aa26.81■■□□□ 1.88
CSHL1-203ENST00000346606 GAPVD1Q14C86 1478 aa26.72■■□□□ 1.87
CSHL1-203ENST00000346606 ABCA10Q8WWZ4 1543 aa26.63■■□□□ 1.85
CSHL1-203ENST00000346606 AEBP2Q6ZN18 517 aaPredicted RBP26.62■■□□□ 1.85
CSHL1-203ENST00000346606 PBRM1Q86U86 1689 aa26.59■■□□□ 1.85
CSHL1-203ENST00000346606 ABCA5Q8WWZ7 1642 aa26.58■■□□□ 1.85
CSHL1-203ENST00000346606 ERCC6L2Q5T890 1561 aa26.57■■□□□ 1.84
CSHL1-203ENST00000346606 GRIN2AQ12879 1464 aa26.52■■□□□ 1.84
CSHL1-203ENST00000346606 NUP160Q12769 1436 aa26.48■■□□□ 1.83
CSHL1-203ENST00000346606 WRNQ14191 1432 aaPredicted RBP eCLIP26.44■■□□□ 1.82
CSHL1-203ENST00000346606 CEP170Q5SW79 1584 aa26.44■■□□□ 1.82
CSHL1-203ENST00000346606 ADAMTS12P58397 1594 aa26.41■■□□□ 1.82
CSHL1-203ENST00000346606 SUPT5HO00267 1087 aaKnown RBP26.37■■□□□ 1.81
CSHL1-203ENST00000346606 FHAD1B1AJZ9 1412 aa26.37■■□□□ 1.81
CSHL1-203ENST00000346606 SHROOM2Q13796 1616 aa26.32■■□□□ 1.8
CSHL1-203ENST00000346606 TOP2BQ02880 1626 aa26.28■■□□□ 1.8
CSHL1-203ENST00000346606 PRG4Q92954 1404 aaPredicted RBP26.25■■□□□ 1.79
CSHL1-203ENST00000346606 BIVM-ERCC5R4GMW8 1640 aa26.25■■□□□ 1.79
CSHL1-203ENST00000346606 ERICH3Q5RHP9 1530 aa26.24■■□□□ 1.79
CSHL1-203ENST00000346606 JPH4Q96JJ6 628 aa26.24■■□□□ 1.79
CSHL1-203ENST00000346606 KIF13AQ9H1H9 1805 aa26.14■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms