RNA–Protein interactions for RNA: ENST00000344302.8

KRBOX4-202, Transcript of KRAB box domain containing 4, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene KRBOX4, Length 2,774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRBOX4-202ENST00000344302 NISCHQ9Y2I1 1504 aa28.38■■■□□ 2.13
KRBOX4-202ENST00000344302 HRCP23327 699 aa25.62■■□□□ 1.69
KRBOX4-202ENST00000344302 PELP1Q8IZL8 1130 aaKnown RBP25.05■■□□□ 1.6
KRBOX4-202ENST00000344302 PCGF6Q9BYE7 350 aa24.88■■□□□ 1.57
KRBOX4-202ENST00000344302 SHROOM4Q9ULL8 1493 aa24.88■■□□□ 1.57
KRBOX4-202ENST00000344302 PPARGC1BQ86YN6 1023 aaKnown RBP24.87■■□□□ 1.57
KRBOX4-202ENST00000344302 MYO15BQ96JP2 1530 aa24.86■■□□□ 1.57
KRBOX4-202ENST00000344302 SUPT5HO00267 1087 aaKnown RBP24.85■■□□□ 1.57
KRBOX4-202ENST00000344302 CHIC1Q5VXU3 224 aa24.66■■□□□ 1.54
KRBOX4-202ENST00000344302 DCAF1Q9Y4B6 1507 aa24.57■■□□□ 1.52
KRBOX4-202ENST00000344302 CCDC180Q9P1Z9 1646 aa24.34■■□□□ 1.49
KRBOX4-202ENST00000344302 DCAF8L2P0C7V8 631 aa24.23■■□□□ 1.47
KRBOX4-202ENST00000344302 SCAF1Q9H7N4 1312 aaKnown RBP24.22■■□□□ 1.47
KRBOX4-202ENST00000344302 TRIM26Q12899 539 aaPredicted RBP24.21■■□□□ 1.47
KRBOX4-202ENST00000344302 ZCCHC6Q5VYS8 1495 aaKnown RBP24.21■■□□□ 1.47
KRBOX4-202ENST00000344302 MYT1Q01538 1121 aa24.17■■□□□ 1.46
KRBOX4-202ENST00000344302 ZEB1P37275 1124 aaPredicted RBP24.16■■□□□ 1.46
KRBOX4-202ENST00000344302 LOC105371045A0A1W2PR82 267 aa23.95■■□□□ 1.42
KRBOX4-202ENST00000344302 ABCC9O60706 1549 aa23.93■■□□□ 1.42
KRBOX4-202ENST00000344302 ACIN1Q9UKV3 1341 aaKnown RBP23.66■■□□□ 1.38
KRBOX4-202ENST00000344302 NEUROD1Q13562 356 aa23.51■■□□□ 1.35
KRBOX4-202ENST00000344302 GTF3C3Q9Y5Q9 886 aa23.39■■□□□ 1.34
KRBOX4-202ENST00000344302 CENPBP07199 599 aaPredicted RBP23.38■■□□□ 1.33
KRBOX4-202ENST00000344302 DIEXFQ68CQ4 756 aaKnown RBP23.16■■□□□ 1.3
KRBOX4-202ENST00000344302 TRIM41Q8WV44 630 aa23.07■■□□□ 1.28
KRBOX4-202ENST00000344302 CCER1Q8TC90 406 aaPredicted RBP23.03■■□□□ 1.28
KRBOX4-202ENST00000344302 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.01■■□□□ 1.27
KRBOX4-202ENST00000344302 SCRIBQ14160 1630 aa22.93■■□□□ 1.26
KRBOX4-202ENST00000344302 FAM9AQ8IZU1 332 aaPredicted RBP22.92■■□□□ 1.26
KRBOX4-202ENST00000344302 NACADO15069 1562 aa22.86■■□□□ 1.25
KRBOX4-202ENST00000344302 RSF1Q96T23 1441 aaPredicted RBP22.83■■□□□ 1.24
KRBOX4-202ENST00000344302 RB1CC1Q8TDY2 1594 aa22.79■■□□□ 1.24
KRBOX4-202ENST00000344302 PABPN1Q86U42 306 aaKnown RBP eCLIP22.77■■□□□ 1.24
KRBOX4-202ENST00000344302 TTBK1Q5TCY1 1321 aaPredicted RBP22.74■■□□□ 1.23
KRBOX4-202ENST00000344302 ZNF316A6NFI3 1004 aaPredicted RBP22.72■■□□□ 1.23
KRBOX4-202ENST00000344302 EHMT2Q96KQ7 1210 aa22.68■■□□□ 1.22
KRBOX4-202ENST00000344302 YTHDC1Q96MU7 727 aaKnown RBP22.63■■□□□ 1.21
KRBOX4-202ENST00000344302 WRNQ14191 1432 aaPredicted RBP eCLIP22.55■■□□□ 1.2
KRBOX4-202ENST00000344302 MIER1Q8N108 512 aa22.5■■□□□ 1.19
KRBOX4-202ENST00000344302 CLSPNQ9HAW4 1339 aa22.5■■□□□ 1.19
KRBOX4-202ENST00000344302 ANP32EQ9BTT0 268 aa22.38■■□□□ 1.17
KRBOX4-202ENST00000344302 UNC13AQ9UPW8 1703 aa22.38■■□□□ 1.17
KRBOX4-202ENST00000344302 BCL11AQ9H165 835 aa22.36■■□□□ 1.17
KRBOX4-202ENST00000344302 SUPT16HQ9Y5B9 1047 aaKnown RBP22.29■■□□□ 1.16
KRBOX4-202ENST00000344302 CEP162Q5TB80 1403 aa22.28■■□□□ 1.16
KRBOX4-202ENST00000344302 CECR2Q9BXF3 1484 aa22.26■■□□□ 1.15
KRBOX4-202ENST00000344302 EIF4G1Q04637 1599 aaKnown RBP22.23■■□□□ 1.15
KRBOX4-202ENST00000344302 TSHZ2Q9NRE2 1034 aa22.23■■□□□ 1.15
KRBOX4-202ENST00000344302 BICRAQ9NZM4 1560 aa22.22■■□□□ 1.15
KRBOX4-202ENST00000344302 TNIKQ9UKE5 1360 aa22.17■■□□□ 1.14
KRBOX4-202ENST00000344302 MROH2BQ7Z745 1585 aa22.11■■□□□ 1.13
KRBOX4-202ENST00000344302 WIZO95785 1651 aa22.07■■□□□ 1.12
KRBOX4-202ENST00000344302 CSRNP3Q8WYN3 585 aa22.05■■□□□ 1.12
KRBOX4-202ENST00000344302 BAZ1AQ9NRL2 1556 aaPredicted RBP22.04■■□□□ 1.12
KRBOX4-202ENST00000344302 CCDC88BA6NC98 1476 aa21.98■■□□□ 1.11
KRBOX4-202ENST00000344302 EEA1Q15075 1411 aa21.98■■□□□ 1.11
KRBOX4-202ENST00000344302 HNRNPUL2Q1KMD3 747 aaKnown RBP21.94■■□□□ 1.1
KRBOX4-202ENST00000344302 ABCC8Q09428 1581 aa21.94■■□□□ 1.1
KRBOX4-202ENST00000344302 SOGA1O94964 1423 aa21.89■■□□□ 1.09
KRBOX4-202ENST00000344302 GOLGA3Q08378 1498 aa21.88■■□□□ 1.09
KRBOX4-202ENST00000344302 UBTFP17480 764 aaKnown RBP21.84■■□□□ 1.09
KRBOX4-202ENST00000344302 RUSC2Q8N2Y8 1516 aa21.73■■□□□ 1.07
KRBOX4-202ENST00000344302 TOP2AP11388 1531 aaKnown RBP21.72■■□□□ 1.07
KRBOX4-202ENST00000344302 SMARCA4P51532 1647 aa21.72■■□□□ 1.07
KRBOX4-202ENST00000344302 DHX57Q6P158 1386 aaKnown RBP21.71■■□□□ 1.07
KRBOX4-202ENST00000344302 VPS8Q8N3P4 1428 aa21.7■■□□□ 1.06
KRBOX4-202ENST00000344302 RBM19Q9Y4C8 960 aaKnown RBP21.69■■□□□ 1.06
KRBOX4-202ENST00000344302 KIF21BO75037 1637 aa21.66■■□□□ 1.06
KRBOX4-202ENST00000344302 CLIP1P30622 1438 aa21.65■■□□□ 1.06
KRBOX4-202ENST00000344302 CEP164Q9UPV0 1460 aa21.65■■□□□ 1.06
KRBOX4-202ENST00000344302 SMARCA2P51531 1590 aa21.64■■□□□ 1.06
KRBOX4-202ENST00000344302 BCANQ96GW7 911 aa21.64■■□□□ 1.05
KRBOX4-202ENST00000344302 FKBP8Q14318 412 aa21.63■■□□□ 1.05
KRBOX4-202ENST00000344302 APLP2Q06481 763 aa21.59■■□□□ 1.05
KRBOX4-202ENST00000344302 BAZ1BQ9UIG0 1483 aaKnown RBP21.53■■□□□ 1.04
KRBOX4-202ENST00000344302 KCNH8Q96L42 1107 aa21.53■■□□□ 1.04
KRBOX4-202ENST00000344302 NEFLP07196 543 aa21.52■■□□□ 1.04
KRBOX4-202ENST00000344302 DNAJC5BQ9UF47 199 aa21.51■■□□□ 1.03
KRBOX4-202ENST00000344302 ATAD2BQ9ULI0 1458 aa21.5■■□□□ 1.03
KRBOX4-202ENST00000344302 MSH5O43196 834 aa21.48■■□□□ 1.03
KRBOX4-202ENST00000344302 PRKCSHP14314 528 aaPredicted RBP21.48■■□□□ 1.03
KRBOX4-202ENST00000344302 FANCIQ9NVI1 1328 aa21.43■■□□□ 1.02
KRBOX4-202ENST00000344302 CUX2O14529 1486 aa21.43■■□□□ 1.02
KRBOX4-202ENST00000344302 MYT1LQ9UL68 1186 aa21.4■■□□□ 1.02
KRBOX4-202ENST00000344302 CC2D2AQ9P2K1 1620 aa21.38■■□□□ 1.01
KRBOX4-202ENST00000344302 RRBP1Q9P2E9 1410 aaKnown RBP21.35■■□□□ 1.01
KRBOX4-202ENST00000344302 ITGAEP38570 1179 aa21.33■■□□□ 1.01
KRBOX4-202ENST00000344302 ERICH6Q7L0X2 663 aa21.32■■□□□ 1
KRBOX4-202ENST00000344302 RAPGEF2Q9Y4G8 1499 aa21.32■■□□□ 1
KRBOX4-202ENST00000344302 SYNJ1O43426 1573 aa21.3■■□□□ 1
KRBOX4-202ENST00000344302 CCER2I3L3R5 266 aa21.28■■□□□ 1
KRBOX4-202ENST00000344302 DDX10Q13206 875 aaKnown RBP21.24■□□□□ 0.99
KRBOX4-202ENST00000344302 MAPKBP1O60336 1514 aa21.24■□□□□ 0.99
KRBOX4-202ENST00000344302 PEG3Q9GZU2 1588 aa21.23■□□□□ 0.99
KRBOX4-202ENST00000344302 NCAPD3P42695 1498 aa21.22■□□□□ 0.99
KRBOX4-202ENST00000344302 PPP1R15AO75807 674 aaPredicted RBP21.21■□□□□ 0.99
KRBOX4-202ENST00000344302 CDK11AQ9UQ88 783 aaPredicted RBP21.21■□□□□ 0.99
KRBOX4-202ENST00000344302 ARAP1Q96P48 1450 aa21.19■□□□□ 0.98
KRBOX4-202ENST00000344302 TRIM52Q96A61 297 aa21.19■□□□□ 0.98
KRBOX4-202ENST00000344302 CCNB3Q8WWL7 1395 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms