RNA–Protein interactions for RNA: ENST00000342788.8

ERBB4-202, Transcript of erb-b2 receptor tyrosine kinase 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ERBB4, Length 12,136 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB4-202ENST00000342788 PELP1Q8IZL8 1130 aaKnown RBP13.71□□□□□ -0.22
ERBB4-202ENST00000342788 MYT1Q01538 1121 aa13.49□□□□□ -0.25
ERBB4-202ENST00000342788 CCER1Q8TC90 406 aaPredicted RBP12.99□□□□□ -0.33
ERBB4-202ENST00000342788 ERICH6Q7L0X2 663 aa12.9□□□□□ -0.34
ERBB4-202ENST00000342788 CENPBP07199 599 aaPredicted RBP12.72□□□□□ -0.37
ERBB4-202ENST00000342788 YTHDC1Q96MU7 727 aaKnown RBP12.69□□□□□ -0.38
ERBB4-202ENST00000342788 TTBK1Q5TCY1 1321 aaPredicted RBP12.61□□□□□ -0.39
ERBB4-202ENST00000342788 DCAF8L2P0C7V8 631 aa12.54□□□□□ -0.4
ERBB4-202ENST00000342788 ZEB1P37275 1124 aaPredicted RBP12.45□□□□□ -0.42
ERBB4-202ENST00000342788 NEFLP07196 543 aa12.41□□□□□ -0.42
ERBB4-202ENST00000342788 APLP2Q06481 763 aa12.31□□□□□ -0.44
ERBB4-202ENST00000342788 DAXXQ9UER7 740 aaPredicted RBP12.22□□□□□ -0.45
ERBB4-202ENST00000342788 SUPT5HO00267 1087 aaKnown RBP12.16□□□□□ -0.46
ERBB4-202ENST00000342788 RTL5Q5HYW3 569 aaPredicted RBP12.08□□□□□ -0.48
ERBB4-202ENST00000342788 FAM9AQ8IZU1 332 aaPredicted RBP12.06□□□□□ -0.48
ERBB4-202ENST00000342788 PCGF6Q9BYE7 350 aa12.03□□□□□ -0.48
ERBB4-202ENST00000342788 GLIPR1L2Q4G1C9 344 aa11.88□□□□□ -0.51
ERBB4-202ENST00000342788 ZNF316A6NFI3 1004 aaPredicted RBP11.86□□□□□ -0.51
ERBB4-202ENST00000342788 EHMT2Q96KQ7 1210 aa11.76□□□□□ -0.53
ERBB4-202ENST00000342788 MYT1LQ9UL68 1186 aa11.68□□□□□ -0.54
ERBB4-202ENST00000342788 CLSPNQ9HAW4 1339 aa11.61□□□□□ -0.55
ERBB4-202ENST00000342788 HRCP23327 699 aa11.58□□□□□ -0.56
ERBB4-202ENST00000342788 SHROOM4Q9ULL8 1493 aa11.53□□□□□ -0.56
ERBB4-202ENST00000342788 TRIM26Q12899 539 aaPredicted RBP11.52□□□□□ -0.56
ERBB4-202ENST00000342788 EIF5BO60841 1220 aaKnown RBP11.52□□□□□ -0.57
ERBB4-202ENST00000342788 ANP32BQ92688 251 aaKnown RBP11.5□□□□□ -0.57
ERBB4-202ENST00000342788 CDK11AQ9UQ88 783 aaPredicted RBP11.49□□□□□ -0.57
ERBB4-202ENST00000342788 ANP32AP39687 249 aaKnown RBP11.41□□□□□ -0.58
ERBB4-202ENST00000342788 TRIM41Q8WV44 630 aa11.39□□□□□ -0.59
ERBB4-202ENST00000342788 TNNT2P45379 298 aaPredicted RBP11.36□□□□□ -0.59
ERBB4-202ENST00000342788 UBTFP17480 764 aaKnown RBP11.35□□□□□ -0.59
ERBB4-202ENST00000342788 DIEXFQ68CQ4 756 aaKnown RBP11.35□□□□□ -0.59
ERBB4-202ENST00000342788 ZBTB47Q9UFB7 747 aaPredicted RBP11.34□□□□□ -0.59
ERBB4-202ENST00000342788 ATP1B4Q9UN42 357 aaPredicted RBP11.3□□□□□ -0.6
ERBB4-202ENST00000342788 GTF3C3Q9Y5Q9 886 aa11.28□□□□□ -0.6
ERBB4-202ENST00000342788 RANGAP1P46060 587 aaPredicted RBP11.28□□□□□ -0.6
ERBB4-202ENST00000342788 POLR3GLQ9BT43 218 aa11.23□□□□□ -0.61
ERBB4-202ENST00000342788 TRIM44Q96DX7 344 aaPredicted RBP11.19□□□□□ -0.62
ERBB4-202ENST00000342788 NCLP19338 710 aaKnown RBP11.18□□□□□ -0.62
ERBB4-202ENST00000342788 ANP32EQ9BTT0 268 aa11.16□□□□□ -0.62
ERBB4-202ENST00000342788 NISCHQ9Y2I1 1504 aa11.15□□□□□ -0.62
ERBB4-202ENST00000342788 UPF2Q9HAU5 1272 aaKnown RBP11.15□□□□□ -0.63
ERBB4-202ENST00000342788 ANP32CO43423 234 aa11.15□□□□□ -0.63
ERBB4-202ENST00000342788 CDK11BP21127 795 aaKnown RBP11.14□□□□□ -0.63
ERBB4-202ENST00000342788 HSP90AA1P07900 732 aaKnown RBP11.13□□□□□ -0.63
ERBB4-202ENST00000342788 NEFMP07197 916 aa11.13□□□□□ -0.63
ERBB4-202ENST00000342788 ACIN1Q9UKV3 1341 aaKnown RBP11.13□□□□□ -0.63
ERBB4-202ENST00000342788 BCANQ96GW7 911 aa11.11□□□□□ -0.63
ERBB4-202ENST00000342788 CANXP27824 592 aaKnown RBP11.09□□□□□ -0.63
ERBB4-202ENST00000342788 ERICH6BQ5W0A0 696 aa11.06□□□□□ -0.64
ERBB4-202ENST00000342788 CHIC1Q5VXU3 224 aa11.03□□□□□ -0.64
ERBB4-202ENST00000342788 SLC4A1APQ9BWU0 796 aaKnown RBP11.03□□□□□ -0.64
ERBB4-202ENST00000342788 NPM2Q86SE8 214 aaKnown RBP10.99□□□□□ -0.65
ERBB4-202ENST00000342788 ITGAEP38570 1179 aa10.97□□□□□ -0.65
ERBB4-202ENST00000342788 HNRNPUL2Q1KMD3 747 aaKnown RBP10.96□□□□□ -0.65
ERBB4-202ENST00000342788 CNGB1Q14028 1251 aaPredicted RBP10.96□□□□□ -0.66
ERBB4-202ENST00000342788 PPARGC1BQ86YN6 1023 aaKnown RBP10.94□□□□□ -0.66
ERBB4-202ENST00000342788 DDRGK1Q96HY6 314 aa10.93□□□□□ -0.66
ERBB4-202ENST00000342788 NBR1Q14596 966 aa10.91□□□□□ -0.66
ERBB4-202ENST00000342788 GOLGA6L22H0YM25 854 aa10.91□□□□□ -0.66
ERBB4-202ENST00000342788 BECN1Q14457 450 aa10.9□□□□□ -0.66
ERBB4-202ENST00000342788 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.9□□□□□ -0.67
ERBB4-202ENST00000342788 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.87□□□□□ -0.67
ERBB4-202ENST00000342788 NAP1L5Q96NT1 182 aaPredicted RBP10.84□□□□□ -0.67
ERBB4-202ENST00000342788 PPM1GO15355 546 aaPredicted RBP10.83□□□□□ -0.68
ERBB4-202ENST00000342788 FKBP8Q14318 412 aa10.83□□□□□ -0.68
ERBB4-202ENST00000342788 CCDC136Q96JN2 1154 aa10.81□□□□□ -0.68
ERBB4-202ENST00000342788 PTMAP06454 111 aaKnown RBP10.81□□□□□ -0.68
ERBB4-202ENST00000342788 NRDCO43847 1150 aa10.8□□□□□ -0.68
ERBB4-202ENST00000342788 DNTTIP2Q5QJE6 756 aaKnown RBP10.8□□□□□ -0.68
ERBB4-202ENST00000342788 CHAF1AQ13111 956 aaPredicted RBP10.8□□□□□ -0.68
ERBB4-202ENST00000342788 ZNF326Q5BKZ1 582 aaKnown RBP10.79□□□□□ -0.68
ERBB4-202ENST00000342788 GOLGA6L6A8MZA4 724 aa10.76□□□□□ -0.69
ERBB4-202ENST00000342788 PTMSP20962 102 aa10.76□□□□□ -0.69
ERBB4-202ENST00000342788 ZRSR1Q15695 479 aaKnown RBP10.76□□□□□ -0.69
ERBB4-202ENST00000342788 ARXQ96QS3 562 aa10.75□□□□□ -0.69
ERBB4-202ENST00000342788 BCL11AQ9H165 835 aa10.74□□□□□ -0.69
ERBB4-202ENST00000342788 L1TD1Q5T7N2 865 aaKnown RBP10.73□□□□□ -0.69
ERBB4-202ENST00000342788 TRIM52Q96A61 297 aa10.72□□□□□ -0.69
ERBB4-202ENST00000342788 NEUROD1Q13562 356 aa10.72□□□□□ -0.69
ERBB4-202ENST00000342788 SLC24A1O60721 1099 aa10.71□□□□□ -0.69
ERBB4-202ENST00000342788 TNNT3P45378 269 aaPredicted RBP10.71□□□□□ -0.7
ERBB4-202ENST00000342788 CALRP27797 417 aaKnown RBP10.7□□□□□ -0.7
ERBB4-202ENST00000342788 FAM50AQ14320 339 aaKnown RBP10.7□□□□□ -0.7
ERBB4-202ENST00000342788 MYH16Q9H6N6 1097 aa10.7□□□□□ -0.7
ERBB4-202ENST00000342788 HNRNPUQ00839 825 aaKnown RBP eCLIP10.68□□□□□ -0.7
ERBB4-202ENST00000342788 USP35Q9P2H5 1018 aa10.65□□□□□ -0.7
ERBB4-202ENST00000342788 LOC105371045A0A1W2PR82 267 aa10.64□□□□□ -0.71
ERBB4-202ENST00000342788 MSNP26038 577 aaKnown RBP10.64□□□□□ -0.71
ERBB4-202ENST00000342788 ARID4BQ4LE39 1312 aaPredicted RBP10.61□□□□□ -0.71
ERBB4-202ENST00000342788 NOP58Q9Y2X3 529 aaKnown RBP10.6□□□□□ -0.71
ERBB4-202ENST00000342788 CASC1Q6TDU7 716 aa10.59□□□□□ -0.71
ERBB4-202ENST00000342788 SCAF1Q9H7N4 1312 aaKnown RBP10.58□□□□□ -0.72
ERBB4-202ENST00000342788 PNNQ9H307 717 aaKnown RBP10.56□□□□□ -0.72
ERBB4-202ENST00000342788 SETQ01105 290 aaPredicted RBP10.55□□□□□ -0.72
ERBB4-202ENST00000342788 RTN4Q9NQC3 1192 aaKnown RBP10.54□□□□□ -0.72
ERBB4-202ENST00000342788 TONSLQ96HA7 1378 aa10.54□□□□□ -0.72
ERBB4-202ENST00000342788 TMC1Q8TDI8 760 aa10.54□□□□□ -0.72
ERBB4-202ENST00000342788 KIAA2012Q0VF49 1180 aa10.54□□□□□ -0.72
ERBB4-202ENST00000342788 RSPH6AQ9H0K4 717 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms