RNA–Protein interactions for RNA: ENST00000342374.4

SERINC3-202, Transcript of serine incorporator 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SERINC3, Length 4,445 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERINC3-202ENST00000342374 NISCHQ9Y2I1 1504 aa22.02■■□□□ 1.11
SERINC3-202ENST00000342374 DCAF8L2P0C7V8 631 aa21.02■□□□□ 0.95
SERINC3-202ENST00000342374 SHROOM4Q9ULL8 1493 aa19.45■□□□□ 0.7
SERINC3-202ENST00000342374 ABCC9O60706 1549 aa19.32■□□□□ 0.68
SERINC3-202ENST00000342374 SUPT5HO00267 1087 aaKnown RBP19.16■□□□□ 0.66
SERINC3-202ENST00000342374 CCDC180Q9P1Z9 1646 aa18.75■□□□□ 0.59
SERINC3-202ENST00000342374 PABPN1Q86U42 306 aaKnown RBP eCLIP18.67■□□□□ 0.58
SERINC3-202ENST00000342374 RB1CC1Q8TDY2 1594 aa18.25■□□□□ 0.51
SERINC3-202ENST00000342374 ZCCHC6Q5VYS8 1495 aaKnown RBP18.21■□□□□ 0.51
SERINC3-202ENST00000342374 NACADO15069 1562 aa18.1■□□□□ 0.49
SERINC3-202ENST00000342374 SCRIBQ14160 1630 aa18.08■□□□□ 0.49
SERINC3-202ENST00000342374 FAM9AQ8IZU1 332 aaPredicted RBP18.08■□□□□ 0.48
SERINC3-202ENST00000342374 EHMT2Q96KQ7 1210 aa18.07■□□□□ 0.48
SERINC3-202ENST00000342374 TRIM41Q8WV44 630 aa17.94■□□□□ 0.46
SERINC3-202ENST00000342374 APLP2Q06481 763 aa17.75■□□□□ 0.43
SERINC3-202ENST00000342374 DCAF1Q9Y4B6 1507 aa17.72■□□□□ 0.43
SERINC3-202ENST00000342374 RANGAP1P46060 587 aaPredicted RBP17.69■□□□□ 0.42
SERINC3-202ENST00000342374 UBTFP17480 764 aaKnown RBP17.61■□□□□ 0.41
SERINC3-202ENST00000342374 ATP1B4Q9UN42 357 aaPredicted RBP17.56■□□□□ 0.4
SERINC3-202ENST00000342374 MYO15BQ96JP2 1530 aa17.53■□□□□ 0.4
SERINC3-202ENST00000342374 TTBK1Q5TCY1 1321 aaPredicted RBP17.43■□□□□ 0.38
SERINC3-202ENST00000342374 FBLN2P98095 1184 aa17.41■□□□□ 0.38
SERINC3-202ENST00000342374 BAZ1BQ9UIG0 1483 aaKnown RBP17.35■□□□□ 0.37
SERINC3-202ENST00000342374 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.3■□□□□ 0.36
SERINC3-202ENST00000342374 HNRNPUL2Q1KMD3 747 aaKnown RBP17.3■□□□□ 0.36
SERINC3-202ENST00000342374 BAZ1AQ9NRL2 1556 aaPredicted RBP17.29■□□□□ 0.36
SERINC3-202ENST00000342374 ERCC6Q03468 1493 aa17.22■□□□□ 0.35
SERINC3-202ENST00000342374 CHIC1Q5VXU3 224 aa17.21■□□□□ 0.35
SERINC3-202ENST00000342374 RSF1Q96T23 1441 aaPredicted RBP17.21■□□□□ 0.35
SERINC3-202ENST00000342374 CECR2Q9BXF3 1484 aa17.21■□□□□ 0.34
SERINC3-202ENST00000342374 SMARCA2P51531 1590 aa17.1■□□□□ 0.33
SERINC3-202ENST00000342374 MYT1LQ9UL68 1186 aa17.08■□□□□ 0.33
SERINC3-202ENST00000342374 MROH2BQ7Z745 1585 aa16.97■□□□□ 0.31
SERINC3-202ENST00000342374 CHMP7Q8WUX9 453 aaPredicted RBP16.97■□□□□ 0.31
SERINC3-202ENST00000342374 PDS5BQ9NTI5 1447 aa16.95■□□□□ 0.3
SERINC3-202ENST00000342374 CSRNP3Q8WYN3 585 aa16.92■□□□□ 0.3
SERINC3-202ENST00000342374 ATAD2BQ9ULI0 1458 aa16.91■□□□□ 0.3
SERINC3-202ENST00000342374 LOC105371045A0A1W2PR82 267 aa16.87■□□□□ 0.29
SERINC3-202ENST00000342374 NPM1P06748 294 aaKnown RBP eCLIP16.87■□□□□ 0.29
SERINC3-202ENST00000342374 EIF4G1Q04637 1599 aaKnown RBP16.85■□□□□ 0.29
SERINC3-202ENST00000342374 SMARCA4P51532 1647 aa16.82■□□□□ 0.28
SERINC3-202ENST00000342374 CADPSQ9ULU8 1353 aa16.8■□□□□ 0.28
SERINC3-202ENST00000342374 P3H3Q8IVL6 736 aa16.8■□□□□ 0.28
SERINC3-202ENST00000342374 WRNQ14191 1432 aaPredicted RBP eCLIP16.78■□□□□ 0.28
SERINC3-202ENST00000342374 PPARGC1BQ86YN6 1023 aaKnown RBP16.76■□□□□ 0.27
SERINC3-202ENST00000342374 CCDC88BA6NC98 1476 aa16.73■□□□□ 0.27
SERINC3-202ENST00000342374 ARID3CA6NKF2 412 aa16.72■□□□□ 0.27
SERINC3-202ENST00000342374 NCAPD3P42695 1498 aa16.71■□□□□ 0.27
SERINC3-202ENST00000342374 TOP2AP11388 1531 aaKnown RBP16.71■□□□□ 0.26
SERINC3-202ENST00000342374 ITGAEP38570 1179 aa16.7■□□□□ 0.26
SERINC3-202ENST00000342374 WIZO95785 1651 aa16.7■□□□□ 0.26
SERINC3-202ENST00000342374 DNAJC5BQ9UF47 199 aa16.68■□□□□ 0.26
SERINC3-202ENST00000342374 CDK11AQ9UQ88 783 aaPredicted RBP16.68■□□□□ 0.26
SERINC3-202ENST00000342374 CC2D2AQ9P2K1 1620 aa16.67■□□□□ 0.26
SERINC3-202ENST00000342374 CEP164Q9UPV0 1460 aa16.64■□□□□ 0.25
SERINC3-202ENST00000342374 KIF27Q86VH2 1401 aa16.64■□□□□ 0.25
SERINC3-202ENST00000342374 BICRAQ9NZM4 1560 aa16.62■□□□□ 0.25
SERINC3-202ENST00000342374 PCGF6Q9BYE7 350 aa16.62■□□□□ 0.25
SERINC3-202ENST00000342374 FANCD2Q9BXW9 1451 aa16.56■□□□□ 0.24
SERINC3-202ENST00000342374 SOGA1O94964 1423 aa16.55■□□□□ 0.24
SERINC3-202ENST00000342374 FAM50AQ14320 339 aaKnown RBP16.55■□□□□ 0.24
SERINC3-202ENST00000342374 CUX2O14529 1486 aa16.53■□□□□ 0.24
SERINC3-202ENST00000342374 EEA1Q15075 1411 aa16.51■□□□□ 0.23
SERINC3-202ENST00000342374 TDRD9Q8NDG6 1382 aaKnown RBP16.51■□□□□ 0.23
SERINC3-202ENST00000342374 CCER1Q8TC90 406 aaPredicted RBP16.48■□□□□ 0.23
SERINC3-202ENST00000342374 ZNF777Q9ULD5 760 aaPredicted RBP16.47■□□□□ 0.23
SERINC3-202ENST00000342374 ABCC8Q09428 1581 aa16.46■□□□□ 0.23
SERINC3-202ENST00000342374 HMGXB3Q12766 1538 aa16.43■□□□□ 0.22
SERINC3-202ENST00000342374 CARMIL1Q5VZK9 1371 aa16.4■□□□□ 0.22
SERINC3-202ENST00000342374 ESF1Q9H501 851 aaKnown RBP16.4■□□□□ 0.22
SERINC3-202ENST00000342374 TRHP20396 242 aaPredicted RBP16.39■□□□□ 0.21
SERINC3-202ENST00000342374 KCNH8Q96L42 1107 aa16.37■□□□□ 0.21
SERINC3-202ENST00000342374 UNC13AQ9UPW8 1703 aa16.36■□□□□ 0.21
SERINC3-202ENST00000342374 OSCARQ8IYS5 282 aa16.35■□□□□ 0.21
SERINC3-202ENST00000342374 PLEKHD1A6NEE1 506 aa16.35■□□□□ 0.21
SERINC3-202ENST00000342374 NESP48681 1621 aa16.35■□□□□ 0.21
SERINC3-202ENST00000342374 TRIM52Q96A61 297 aa16.33■□□□□ 0.21
SERINC3-202ENST00000342374 TRIM26Q12899 539 aaPredicted RBP16.33■□□□□ 0.2
SERINC3-202ENST00000342374 GOLGA3Q08378 1498 aa16.32■□□□□ 0.2
SERINC3-202ENST00000342374 CLIP1P30622 1438 aa16.28■□□□□ 0.2
SERINC3-202ENST00000342374 CFTRP13569 1480 aa16.27■□□□□ 0.2
SERINC3-202ENST00000342374 CARMIL2Q6F5E8 1435 aa16.27■□□□□ 0.2
SERINC3-202ENST00000342374 MTUS2Q5JR59 1369 aa16.27■□□□□ 0.2
SERINC3-202ENST00000342374 MRC2Q9UBG0 1479 aa16.27■□□□□ 0.19
SERINC3-202ENST00000342374 PLPPR3Q6T4P5 718 aa16.21■□□□□ 0.19
SERINC3-202ENST00000342374 FGD5Q6ZNL6 1462 aa16.2■□□□□ 0.18
SERINC3-202ENST00000342374 TSPY4P0CV99 314 aa16.19■□□□□ 0.18
SERINC3-202ENST00000342374 TSPY10P0CW01 314 aa16.19■□□□□ 0.18
SERINC3-202ENST00000342374 ZEB1P37275 1124 aaPredicted RBP16.17■□□□□ 0.18
SERINC3-202ENST00000342374 JPH4Q96JJ6 628 aa16.17■□□□□ 0.18
SERINC3-202ENST00000342374 LAMC3Q9Y6N6 1575 aa16.16■□□□□ 0.18
SERINC3-202ENST00000342374 CYB5RLQ6IPT4 315 aa16.16■□□□□ 0.18
SERINC3-202ENST00000342374 GAPVD1Q14C86 1478 aa16.15■□□□□ 0.18
SERINC3-202ENST00000342374 RAD54L2Q9Y4B4 1467 aa16.15■□□□□ 0.18
SERINC3-202ENST00000342374 BCANQ96GW7 911 aa16.14■□□□□ 0.17
SERINC3-202ENST00000342374 AQRO60306 1485 aaKnown RBP eCLIP16.12■□□□□ 0.17
SERINC3-202ENST00000342374 IFT140Q96RY7 1462 aa16.11■□□□□ 0.17
SERINC3-202ENST00000342374 TNIKQ9UKE5 1360 aa16.1■□□□□ 0.17
SERINC3-202ENST00000342374 ARID4BQ4LE39 1312 aaPredicted RBP16.1■□□□□ 0.17
SERINC3-202ENST00000342374 RAPGEF2Q9Y4G8 1499 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms