RNA–Protein interactions for RNA: ENST00000341298.3

DPM3-201, Transcript of dolichyl-phosphate mannosyltransferase subunit 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene DPM3, Length 486 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DPM3-201ENST00000341298 NISCHQ9Y2I1 1504 aa42.72■■■■■ 4.43
DPM3-201ENST00000341298 CCDC180Q9P1Z9 1646 aa38.01■■■■□ 3.67
DPM3-201ENST00000341298 ABCC9O60706 1549 aa37.53■■■■□ 3.6
DPM3-201ENST00000341298 RB1CC1Q8TDY2 1594 aa35.89■■■■□ 3.34
DPM3-201ENST00000341298 DCAF8L2P0C7V8 631 aa35.85■■■■□ 3.33
DPM3-201ENST00000341298 NACADO15069 1562 aa35.78■■■■□ 3.32
DPM3-201ENST00000341298 ZCCHC6Q5VYS8 1495 aaKnown RBP35.54■■■■□ 3.28
DPM3-201ENST00000341298 MYO15BQ96JP2 1530 aa35.45■■■■□ 3.27
DPM3-201ENST00000341298 DCAF1Q9Y4B6 1507 aa35.25■■■■□ 3.23
DPM3-201ENST00000341298 UNC13AQ9UPW8 1703 aa35.19■■■■□ 3.22
DPM3-201ENST00000341298 PABPN1Q86U42 306 aaKnown RBP eCLIP35.08■■■■□ 3.21
DPM3-201ENST00000341298 BICRAQ9NZM4 1560 aa34.92■■■■□ 3.18
DPM3-201ENST00000341298 SCRIBQ14160 1630 aa34.78■■■■□ 3.16
DPM3-201ENST00000341298 DNAJC5BQ9UF47 199 aa34.73■■■■□ 3.15
DPM3-201ENST00000341298 SHROOM4Q9ULL8 1493 aa34.32■■■■□ 3.08
DPM3-201ENST00000341298 EIF4G1Q04637 1599 aaKnown RBP33.97■■■■□ 3.03
DPM3-201ENST00000341298 CC2D2AQ9P2K1 1620 aa33.9■■■■□ 3.02
DPM3-201ENST00000341298 CECR2Q9BXF3 1484 aa33.69■■■□□ 2.98
DPM3-201ENST00000341298 SMARCA4P51532 1647 aa33.2■■■□□ 2.91
DPM3-201ENST00000341298 ATAD2BQ9ULI0 1458 aa33.08■■■□□ 2.89
DPM3-201ENST00000341298 BAZ1AQ9NRL2 1556 aaPredicted RBP33.08■■■□□ 2.89
DPM3-201ENST00000341298 NCAPD3P42695 1498 aa33.05■■■□□ 2.88
DPM3-201ENST00000341298 MROH2BQ7Z745 1585 aa32.99■■■□□ 2.87
DPM3-201ENST00000341298 SMARCA2P51531 1590 aa32.95■■■□□ 2.86
DPM3-201ENST00000341298 HMGXB3Q12766 1538 aa32.85■■■□□ 2.85
DPM3-201ENST00000341298 PEG3Q9GZU2 1588 aa32.83■■■□□ 2.85
DPM3-201ENST00000341298 BAZ1BQ9UIG0 1483 aaKnown RBP32.77■■■□□ 2.84
DPM3-201ENST00000341298 WIZO95785 1651 aa32.63■■■□□ 2.81
DPM3-201ENST00000341298 RSF1Q96T23 1441 aaPredicted RBP32.51■■■□□ 2.79
DPM3-201ENST00000341298 NESP48681 1621 aa32.45■■■□□ 2.79
DPM3-201ENST00000341298 ERCC6Q03468 1493 aa32.28■■■□□ 2.76
DPM3-201ENST00000341298 LAMC3Q9Y6N6 1575 aa32.19■■■□□ 2.74
DPM3-201ENST00000341298 TOP2AP11388 1531 aaKnown RBP32.19■■■□□ 2.74
DPM3-201ENST00000341298 CADPSQ9ULU8 1353 aa32.09■■■□□ 2.73
DPM3-201ENST00000341298 KIF21AQ7Z4S6 1674 aa32.02■■■□□ 2.72
DPM3-201ENST00000341298 CUX2O14529 1486 aa31.97■■■□□ 2.71
DPM3-201ENST00000341298 PDS5BQ9NTI5 1447 aa31.97■■■□□ 2.71
DPM3-201ENST00000341298 THOC2Q8NI27 1593 aaKnown RBP31.94■■■□□ 2.7
DPM3-201ENST00000341298 CCDC88BA6NC98 1476 aa31.86■■■□□ 2.69
DPM3-201ENST00000341298 CFTRP13569 1480 aa31.85■■■□□ 2.69
DPM3-201ENST00000341298 FANCD2Q9BXW9 1451 aa31.74■■■□□ 2.67
DPM3-201ENST00000341298 MRC2Q9UBG0 1479 aa31.7■■■□□ 2.66
DPM3-201ENST00000341298 CEP164Q9UPV0 1460 aa31.69■■■□□ 2.66
DPM3-201ENST00000341298 WDR62O43379 1518 aa31.6■■■□□ 2.65
DPM3-201ENST00000341298 PRDM2Q13029 1718 aa31.58■■■□□ 2.65
DPM3-201ENST00000341298 SUPT5HO00267 1087 aaKnown RBP31.57■■■□□ 2.64
DPM3-201ENST00000341298 URB2Q14146 1524 aaKnown RBP31.49■■■□□ 2.63
DPM3-201ENST00000341298 DNAJC5Q9H3Z4 198 aa31.31■■■□□ 2.6
DPM3-201ENST00000341298 TOPBP1Q92547 1522 aa31.23■■■□□ 2.59
DPM3-201ENST00000341298 DNMBPQ6XZF7 1577 aa31.13■■■□□ 2.57
DPM3-201ENST00000341298 ABCC8Q09428 1581 aa31.09■■■□□ 2.57
DPM3-201ENST00000341298 IFT140Q96RY7 1462 aa31.02■■■□□ 2.56
DPM3-201ENST00000341298 ZNF608Q9ULD9 1512 aaPredicted RBP31.02■■■□□ 2.56
DPM3-201ENST00000341298 POLA1P09884 1462 aaPredicted RBP30.95■■■□□ 2.54
DPM3-201ENST00000341298 CUX1P39880 1505 aa30.94■■■□□ 2.54
DPM3-201ENST00000341298 TARBP1Q13395 1621 aaKnown RBP30.91■■■□□ 2.54
DPM3-201ENST00000341298 RAD54L2Q9Y4B4 1467 aa30.88■■■□□ 2.53
DPM3-201ENST00000341298 FGD5Q6ZNL6 1462 aa30.85■■■□□ 2.53
DPM3-201ENST00000341298 EIF4G3O43432 1585 aaKnown RBP30.83■■■□□ 2.53
DPM3-201ENST00000341298 AQRO60306 1485 aaKnown RBP eCLIP30.81■■■□□ 2.52
DPM3-201ENST00000341298 SOGA1O94964 1423 aa30.81■■■□□ 2.52
DPM3-201ENST00000341298 TDRD9Q8NDG6 1382 aaKnown RBP30.7■■■□□ 2.51
DPM3-201ENST00000341298 OSCARQ8IYS5 282 aa30.64■■■□□ 2.5
DPM3-201ENST00000341298 SYNJ1O43426 1573 aa30.62■■■□□ 2.49
DPM3-201ENST00000341298 WRNQ14191 1432 aaPredicted RBP eCLIP30.61■■■□□ 2.49
DPM3-201ENST00000341298 WDR97A6NE52 1622 aa30.6■■■□□ 2.49
DPM3-201ENST00000341298 BIVM-ERCC5R4GMW8 1640 aa30.57■■■□□ 2.48
DPM3-201ENST00000341298 TOP2BQ02880 1626 aa30.56■■■□□ 2.48
DPM3-201ENST00000341298 CHD1O14646 1710 aa30.5■■■□□ 2.47
DPM3-201ENST00000341298 ABCA10Q8WWZ4 1543 aa30.5■■■□□ 2.47
DPM3-201ENST00000341298 SNAPC4Q5SXM2 1469 aa30.49■■■□□ 2.47
DPM3-201ENST00000341298 FBLN2P98095 1184 aa30.45■■■□□ 2.47
DPM3-201ENST00000341298 GRIN2BQ13224 1484 aa30.44■■■□□ 2.46
DPM3-201ENST00000341298 GAPVD1Q14C86 1478 aa30.44■■■□□ 2.46
DPM3-201ENST00000341298 ABCA5Q8WWZ7 1642 aa30.42■■■□□ 2.46
DPM3-201ENST00000341298 PBRM1Q86U86 1689 aa30.4■■■□□ 2.46
DPM3-201ENST00000341298 MAGI1Q96QZ7 1491 aaPredicted RBP30.35■■■□□ 2.45
DPM3-201ENST00000341298 CHMP7Q8WUX9 453 aaPredicted RBP30.28■■■□□ 2.44
DPM3-201ENST00000341298 TRIM41Q8WV44 630 aa30.26■■■□□ 2.43
DPM3-201ENST00000341298 SYNJ2O15056 1496 aa30.25■■■□□ 2.43
DPM3-201ENST00000341298 RIMBP3CA6NJZ7 1639 aa30.25■■■□□ 2.43
DPM3-201ENST00000341298 RIMBP3BA6NNM3 1639 aa30.25■■■□□ 2.43
DPM3-201ENST00000341298 RIMBP3Q9UFD9 1639 aa30.25■■■□□ 2.43
DPM3-201ENST00000341298 ARHGEF11O15085 1522 aa30.19■■■□□ 2.42
DPM3-201ENST00000341298 CLASP1Q7Z460 1538 aa30.15■■■□□ 2.42
DPM3-201ENST00000341298 ADAMTS12P58397 1594 aa30.15■■■□□ 2.42
DPM3-201ENST00000341298 ERICH3Q5RHP9 1530 aa30.1■■■□□ 2.41
DPM3-201ENST00000341298 GRIN2AQ12879 1464 aa30.06■■■□□ 2.4
DPM3-201ENST00000341298 FHAD1B1AJZ9 1412 aa30.05■■■□□ 2.4
DPM3-201ENST00000341298 CEP170Q5SW79 1584 aa29.98■■■□□ 2.39
DPM3-201ENST00000341298 ARAP1Q96P48 1450 aa29.97■■■□□ 2.39
DPM3-201ENST00000341298 KIF27Q86VH2 1401 aa29.96■■■□□ 2.39
DPM3-201ENST00000341298 CYB5RLQ6IPT4 315 aa29.95■■■□□ 2.39
DPM3-201ENST00000341298 NUP160Q12769 1436 aa29.94■■■□□ 2.38
DPM3-201ENST00000341298 IGF1RP08069 1367 aa29.92■■■□□ 2.38
DPM3-201ENST00000341298 ERCC6L2Q5T890 1561 aa29.81■■■□□ 2.36
DPM3-201ENST00000341298 RUSC2Q8N2Y8 1516 aa29.8■■■□□ 2.36
DPM3-201ENST00000341298 CUL7Q14999 1698 aa29.78■■■□□ 2.36
DPM3-201ENST00000341298 SHROOM2Q13796 1616 aa29.74■■■□□ 2.35
DPM3-201ENST00000341298 CARMIL1Q5VZK9 1371 aa29.72■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms