RNA–Protein interactions for RNA: ENST00000340852.9

HM13-202, Transcript of histocompatibility minor 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HM13, Length 1,606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HM13-202ENST00000340852 NISCHQ9Y2I1 1504 aa38.7■■■■□ 3.79
HM13-202ENST00000340852 CCDC180Q9P1Z9 1646 aa34.33■■■■□ 3.09
HM13-202ENST00000340852 ABCC9O60706 1549 aa33.41■■■□□ 2.94
HM13-202ENST00000340852 ZCCHC6Q5VYS8 1495 aaKnown RBP32.28■■■□□ 2.76
HM13-202ENST00000340852 NACADO15069 1562 aa32.23■■■□□ 2.75
HM13-202ENST00000340852 RB1CC1Q8TDY2 1594 aa32.21■■■□□ 2.75
HM13-202ENST00000340852 DCAF8L2P0C7V8 631 aa32.2■■■□□ 2.75
HM13-202ENST00000340852 MYO15BQ96JP2 1530 aa32.12■■■□□ 2.73
HM13-202ENST00000340852 DCAF1Q9Y4B6 1507 aa32.05■■■□□ 2.72
HM13-202ENST00000340852 UNC13AQ9UPW8 1703 aa31.54■■■□□ 2.64
HM13-202ENST00000340852 SCRIBQ14160 1630 aa31.32■■■□□ 2.6
HM13-202ENST00000340852 BICRAQ9NZM4 1560 aa31.28■■■□□ 2.6
HM13-202ENST00000340852 PABPN1Q86U42 306 aaKnown RBP eCLIP31.25■■■□□ 2.59
HM13-202ENST00000340852 SHROOM4Q9ULL8 1493 aa30.93■■■□□ 2.54
HM13-202ENST00000340852 DNAJC5BQ9UF47 199 aa30.55■■■□□ 2.48
HM13-202ENST00000340852 EIF4G1Q04637 1599 aaKnown RBP30.42■■■□□ 2.46
HM13-202ENST00000340852 CC2D2AQ9P2K1 1620 aa30.25■■■□□ 2.43
HM13-202ENST00000340852 CECR2Q9BXF3 1484 aa30.15■■■□□ 2.42
HM13-202ENST00000340852 SMARCA4P51532 1647 aa29.99■■■□□ 2.39
HM13-202ENST00000340852 BAZ1AQ9NRL2 1556 aaPredicted RBP29.97■■■□□ 2.39
HM13-202ENST00000340852 MROH2BQ7Z745 1585 aa29.84■■■□□ 2.37
HM13-202ENST00000340852 ATAD2BQ9ULI0 1458 aa29.79■■■□□ 2.36
HM13-202ENST00000340852 NCAPD3P42695 1498 aa29.75■■■□□ 2.35
HM13-202ENST00000340852 SMARCA2P51531 1590 aa29.74■■■□□ 2.35
HM13-202ENST00000340852 PEG3Q9GZU2 1588 aa29.72■■■□□ 2.35
HM13-202ENST00000340852 HMGXB3Q12766 1538 aa29.61■■■□□ 2.33
HM13-202ENST00000340852 RSF1Q96T23 1441 aaPredicted RBP29.56■■■□□ 2.32
HM13-202ENST00000340852 BAZ1BQ9UIG0 1483 aaKnown RBP29.53■■■□□ 2.32
HM13-202ENST00000340852 WIZO95785 1651 aa29.52■■■□□ 2.32
HM13-202ENST00000340852 TOP2AP11388 1531 aaKnown RBP29.2■■■□□ 2.27
HM13-202ENST00000340852 NESP48681 1621 aa28.98■■■□□ 2.23
HM13-202ENST00000340852 LAMC3Q9Y6N6 1575 aa28.93■■■□□ 2.22
HM13-202ENST00000340852 SUPT5HO00267 1087 aaKnown RBP28.89■■■□□ 2.22
HM13-202ENST00000340852 CADPSQ9ULU8 1353 aa28.88■■■□□ 2.21
HM13-202ENST00000340852 CCDC88BA6NC98 1476 aa28.87■■■□□ 2.21
HM13-202ENST00000340852 CFTRP13569 1480 aa28.76■■■□□ 2.2
HM13-202ENST00000340852 ERCC6Q03468 1493 aa28.76■■■□□ 2.19
HM13-202ENST00000340852 PDS5BQ9NTI5 1447 aa28.71■■■□□ 2.19
HM13-202ENST00000340852 KIF21AQ7Z4S6 1674 aa28.65■■■□□ 2.18
HM13-202ENST00000340852 PRDM2Q13029 1718 aa28.55■■■□□ 2.16
HM13-202ENST00000340852 FANCD2Q9BXW9 1451 aa28.55■■■□□ 2.16
HM13-202ENST00000340852 THOC2Q8NI27 1593 aaKnown RBP28.51■■■□□ 2.15
HM13-202ENST00000340852 CEP164Q9UPV0 1460 aa28.49■■■□□ 2.15
HM13-202ENST00000340852 CUX2O14529 1486 aa28.42■■■□□ 2.14
HM13-202ENST00000340852 MRC2Q9UBG0 1479 aa28.4■■■□□ 2.14
HM13-202ENST00000340852 WDR62O43379 1518 aa28.33■■■□□ 2.13
HM13-202ENST00000340852 URB2Q14146 1524 aaKnown RBP28.27■■■□□ 2.12
HM13-202ENST00000340852 TOPBP1Q92547 1522 aa28.12■■■□□ 2.09
HM13-202ENST00000340852 ABCC8Q09428 1581 aa28.11■■■□□ 2.09
HM13-202ENST00000340852 DNMBPQ6XZF7 1577 aa28.09■■■□□ 2.09
HM13-202ENST00000340852 CUX1P39880 1505 aa27.98■■■□□ 2.07
HM13-202ENST00000340852 POLA1P09884 1462 aaPredicted RBP27.9■■■□□ 2.06
HM13-202ENST00000340852 IFT140Q96RY7 1462 aa27.88■■■□□ 2.05
HM13-202ENST00000340852 WRNQ14191 1432 aaPredicted RBP eCLIP27.84■■■□□ 2.05
HM13-202ENST00000340852 FGD5Q6ZNL6 1462 aa27.84■■■□□ 2.05
HM13-202ENST00000340852 TARBP1Q13395 1621 aaKnown RBP27.82■■■□□ 2.04
HM13-202ENST00000340852 SYNJ1O43426 1573 aa27.79■■■□□ 2.04
HM13-202ENST00000340852 TOP2BQ02880 1626 aa27.78■■■□□ 2.04
HM13-202ENST00000340852 BIVM-ERCC5R4GMW8 1640 aa27.78■■■□□ 2.04
HM13-202ENST00000340852 ZNF608Q9ULD9 1512 aaPredicted RBP27.77■■■□□ 2.04
HM13-202ENST00000340852 RAD54L2Q9Y4B4 1467 aa27.77■■■□□ 2.04
HM13-202ENST00000340852 SOGA1O94964 1423 aa27.76■■■□□ 2.03
HM13-202ENST00000340852 EIF4G3O43432 1585 aaKnown RBP27.66■■■□□ 2.02
HM13-202ENST00000340852 WDR97A6NE52 1622 aa27.63■■■□□ 2.01
HM13-202ENST00000340852 AQRO60306 1485 aaKnown RBP eCLIP27.62■■■□□ 2.016e-8■■■■□ 25.7
HM13-202ENST00000340852 TDRD9Q8NDG6 1382 aaKnown RBP27.6■■■□□ 2.01
HM13-202ENST00000340852 ABCA10Q8WWZ4 1543 aa27.59■■■□□ 2.01
HM13-202ENST00000340852 ABCA5Q8WWZ7 1642 aa27.48■■□□□ 1.99
HM13-202ENST00000340852 GAPVD1Q14C86 1478 aa27.45■■□□□ 1.98
HM13-202ENST00000340852 GRIN2BQ13224 1484 aa27.42■■□□□ 1.98
HM13-202ENST00000340852 PBRM1Q86U86 1689 aa27.39■■□□□ 1.98
HM13-202ENST00000340852 SNAPC4Q5SXM2 1469 aa27.36■■□□□ 1.97
HM13-202ENST00000340852 DNAJC5Q9H3Z4 198 aa27.36■■□□□ 1.97
HM13-202ENST00000340852 MAGI1Q96QZ7 1491 aaPredicted RBP27.34■■□□□ 1.97
HM13-202ENST00000340852 CHD1O14646 1710 aa27.27■■□□□ 1.96
HM13-202ENST00000340852 TRIM41Q8WV44 630 aa27.27■■□□□ 1.96
HM13-202ENST00000340852 OSCARQ8IYS5 282 aa27.27■■□□□ 1.96
HM13-202ENST00000340852 ERICH3Q5RHP9 1530 aa27.26■■□□□ 1.95
HM13-202ENST00000340852 KIF27Q86VH2 1401 aa27.24■■□□□ 1.95
HM13-202ENST00000340852 SYNJ2O15056 1496 aa27.22■■□□□ 1.95
HM13-202ENST00000340852 FBLN2P98095 1184 aa27.21■■□□□ 1.95
HM13-202ENST00000340852 ADAMTS12P58397 1594 aa27.19■■□□□ 1.94
HM13-202ENST00000340852 CHMP7Q8WUX9 453 aaPredicted RBP27.18■■□□□ 1.94
HM13-202ENST00000340852 FHAD1B1AJZ9 1412 aa27.14■■□□□ 1.94
HM13-202ENST00000340852 IGF1RP08069 1367 aa27.14■■□□□ 1.93
HM13-202ENST00000340852 CHIC1Q5VXU3 224 aa27.08■■□□□ 1.93
HM13-202ENST00000340852 GRIN2AQ12879 1464 aa27.08■■□□□ 1.93
HM13-202ENST00000340852 RUSC2Q8N2Y8 1516 aa27.08■■□□□ 1.93
HM13-202ENST00000340852 CUL7Q14999 1698 aa27.03■■□□□ 1.92
HM13-202ENST00000340852 CLASP1Q7Z460 1538 aa26.99■■□□□ 1.91
HM13-202ENST00000340852 NUP160Q12769 1436 aa26.96■■□□□ 1.91
HM13-202ENST00000340852 CARMIL1Q5VZK9 1371 aa26.96■■□□□ 1.91
HM13-202ENST00000340852 CEP170Q5SW79 1584 aa26.95■■□□□ 1.9
HM13-202ENST00000340852 ARHGEF11O15085 1522 aa26.84■■□□□ 1.89
HM13-202ENST00000340852 RIMBP3CA6NJZ7 1639 aa26.83■■□□□ 1.89
HM13-202ENST00000340852 RIMBP3BA6NNM3 1639 aa26.83■■□□□ 1.89
HM13-202ENST00000340852 RIMBP3Q9UFD9 1639 aa26.83■■□□□ 1.89
HM13-202ENST00000340852 EEA1Q15075 1411 aa26.82■■□□□ 1.88
HM13-202ENST00000340852 RAPGEF2Q9Y4G8 1499 aa26.82■■□□□ 1.88
HM13-202ENST00000340852 PRXQ9BXM0 1461 aa26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms