RNA–Protein interactions for RNA: ENST00000340535.11

MIA3-201, Transcript of MIA SH3 domain ER export factor 3, humanhuman

TSL 1 (best) BASIC

Gene MIA3, Length 2,735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIA3-201ENST00000340535 NISCHQ9Y2I1 1504 aa13.32□□□□□ -0.28
MIA3-201ENST00000340535 PELP1Q8IZL8 1130 aaKnown RBP11.8□□□□□ -0.52
MIA3-201ENST00000340535 CCDC180Q9P1Z9 1646 aa11.66□□□□□ -0.54
MIA3-201ENST00000340535 MYT1Q01538 1121 aa11.51□□□□□ -0.57
MIA3-201ENST00000340535 ABCC9O60706 1549 aa11.48□□□□□ -0.57
MIA3-201ENST00000340535 HRCP23327 699 aa11.44□□□□□ -0.58
MIA3-201ENST00000340535 AEBP2Q6ZN18 517 aaPredicted RBP11.39□□□□□ -0.59
MIA3-201ENST00000340535 DCAF8L2P0C7V8 631 aa11.36□□□□□ -0.59
MIA3-201ENST00000340535 CHIC1Q5VXU3 224 aa11.14□□□□□ -0.63
MIA3-201ENST00000340535 ZCCHC6Q5VYS8 1495 aaKnown RBP11.11□□□□□ -0.63
MIA3-201ENST00000340535 PPARGC1BQ86YN6 1023 aaKnown RBP11.06□□□□□ -0.64
MIA3-201ENST00000340535 SCAF1Q9H7N4 1312 aaKnown RBP11.03□□□□□ -0.64
MIA3-201ENST00000340535 TTBK1Q5TCY1 1321 aaPredicted RBP10.98□□□□□ -0.65
MIA3-201ENST00000340535 RB1CC1Q8TDY2 1594 aa10.95□□□□□ -0.66
MIA3-201ENST00000340535 NACADO15069 1562 aa10.94□□□□□ -0.66
MIA3-201ENST00000340535 SHROOM4Q9ULL8 1493 aa10.93□□□□□ -0.66
MIA3-201ENST00000340535 PCGF6Q9BYE7 350 aa10.88□□□□□ -0.67
MIA3-201ENST00000340535 DCAF1Q9Y4B6 1507 aa10.88□□□□□ -0.67
MIA3-201ENST00000340535 SCRIBQ14160 1630 aa10.86□□□□□ -0.67
MIA3-201ENST00000340535 PABPN1Q86U42 306 aaKnown RBP eCLIP10.84□□□□□ -0.67
MIA3-201ENST00000340535 MYO15BQ96JP2 1530 aa10.82□□□□□ -0.68
MIA3-201ENST00000340535 UNC13AQ9UPW8 1703 aa10.79□□□□□ -0.68
MIA3-201ENST00000340535 BICRAQ9NZM4 1560 aa10.66□□□□□ -0.7
MIA3-201ENST00000340535 ACIN1Q9UKV3 1341 aaKnown RBP10.65□□□□□ -0.7
MIA3-201ENST00000340535 ZEB1P37275 1124 aaPredicted RBP10.62□□□□□ -0.71
MIA3-201ENST00000340535 BCL11AQ9H165 835 aa10.58□□□□□ -0.72
MIA3-201ENST00000340535 NEUROD1Q13562 356 aa10.56□□□□□ -0.72
MIA3-201ENST00000340535 PRKCSHP14314 528 aaPredicted RBP10.54□□□□□ -0.72
MIA3-201ENST00000340535 GTF3C3Q9Y5Q9 886 aa10.54□□□□□ -0.72
MIA3-201ENST00000340535 CENPBP07199 599 aaPredicted RBP10.52□□□□□ -0.72
MIA3-201ENST00000340535 TRIM26Q12899 539 aaPredicted RBP10.49□□□□□ -0.73
MIA3-201ENST00000340535 FAM9AQ8IZU1 332 aaPredicted RBP10.48□□□□□ -0.73
MIA3-201ENST00000340535 CECR2Q9BXF3 1484 aa10.47□□□□□ -0.73
MIA3-201ENST00000340535 DNAJC5BQ9UF47 199 aa10.42□□□□□ -0.74
MIA3-201ENST00000340535 EIF4G1Q04637 1599 aaKnown RBP10.37□□□□□ -0.75
MIA3-201ENST00000340535 SUPT5HO00267 1087 aaKnown RBP10.36□□□□□ -0.75
MIA3-201ENST00000340535 ERICH6Q7L0X2 663 aa10.36□□□□□ -0.75
MIA3-201ENST00000340535 MROH2BQ7Z745 1585 aa10.34□□□□□ -0.75
MIA3-201ENST00000340535 ANP32EQ9BTT0 268 aa10.31□□□□□ -0.76
MIA3-201ENST00000340535 CC2D2AQ9P2K1 1620 aa10.31□□□□□ -0.76
MIA3-201ENST00000340535 SMARCA4P51532 1647 aa10.3□□□□□ -0.76
MIA3-201ENST00000340535 BAZ1AQ9NRL2 1556 aaPredicted RBP10.28□□□□□ -0.76
MIA3-201ENST00000340535 APLP2Q06481 763 aa10.28□□□□□ -0.76
MIA3-201ENST00000340535 WIZO95785 1651 aa10.27□□□□□ -0.77
MIA3-201ENST00000340535 RSF1Q96T23 1441 aaPredicted RBP10.27□□□□□ -0.77
MIA3-201ENST00000340535 ATAD2BQ9ULI0 1458 aa10.21□□□□□ -0.78
MIA3-201ENST00000340535 DIEXFQ68CQ4 756 aaKnown RBP10.19□□□□□ -0.78
MIA3-201ENST00000340535 CSRNP3Q8WYN3 585 aa10.17□□□□□ -0.78
MIA3-201ENST00000340535 BAZ1BQ9UIG0 1483 aaKnown RBP10.16□□□□□ -0.78
MIA3-201ENST00000340535 LOC105371045A0A1W2PR82 267 aa10.15□□□□□ -0.78
MIA3-201ENST00000340535 SMARCA2P51531 1590 aa10.14□□□□□ -0.79
MIA3-201ENST00000340535 NCAPD3P42695 1498 aa10.12□□□□□ -0.79
MIA3-201ENST00000340535 PEG3Q9GZU2 1588 aa10.09□□□□□ -0.79
MIA3-201ENST00000340535 TOP2AP11388 1531 aaKnown RBP10.06□□□□□ -0.8
MIA3-201ENST00000340535 HMGXB3Q12766 1538 aa10.05□□□□□ -0.8
MIA3-201ENST00000340535 TSHZ2Q9NRE2 1034 aa10.04□□□□□ -0.8
MIA3-201ENST00000340535 CLSPNQ9HAW4 1339 aa10.04□□□□□ -0.8
MIA3-201ENST00000340535 TRIM41Q8WV44 630 aa10.03□□□□□ -0.8
MIA3-201ENST00000340535 PHF23Q9BUL5 403 aaPredicted RBP10.02□□□□□ -0.81
MIA3-201ENST00000340535 CCDC88BA6NC98 1476 aa10.01□□□□□ -0.81
MIA3-201ENST00000340535 NESP48681 1621 aa10□□□□□ -0.81
MIA3-201ENST00000340535 YTHDC1Q96MU7 727 aaKnown RBP9.99□□□□□ -0.81
MIA3-201ENST00000340535 SUPT16HQ9Y5B9 1047 aaKnown RBP9.95□□□□□ -0.82
MIA3-201ENST00000340535 CCER1Q8TC90 406 aaPredicted RBP9.93□□□□□ -0.82
MIA3-201ENST00000340535 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.91□□□□□ -0.82
MIA3-201ENST00000340535 ZNF316A6NFI3 1004 aaPredicted RBP9.91□□□□□ -0.82
MIA3-201ENST00000340535 CADPSQ9ULU8 1353 aa9.88□□□□□ -0.83
MIA3-201ENST00000340535 MIER1Q8N108 512 aa9.87□□□□□ -0.83
MIA3-201ENST00000340535 ANO8Q9HCE9 1232 aaPredicted RBP9.84□□□□□ -0.83
MIA3-201ENST00000340535 CFTRP13569 1480 aa9.84□□□□□ -0.83
MIA3-201ENST00000340535 ERCC6Q03468 1493 aa9.84□□□□□ -0.83
MIA3-201ENST00000340535 KIF21AQ7Z4S6 1674 aa9.82□□□□□ -0.84
MIA3-201ENST00000340535 SLC24A1O60721 1099 aa9.82□□□□□ -0.84
MIA3-201ENST00000340535 LAMC3Q9Y6N6 1575 aa9.81□□□□□ -0.84
MIA3-201ENST00000340535 FANCD2Q9BXW9 1451 aa9.8□□□□□ -0.84
MIA3-201ENST00000340535 ABCC8Q09428 1581 aa9.79□□□□□ -0.84
MIA3-201ENST00000340535 UBE2Q2Q8WVN8 375 aa9.78□□□□□ -0.84
MIA3-201ENST00000340535 MYT1LQ9UL68 1186 aa9.78□□□□□ -0.84
MIA3-201ENST00000340535 PDS5BQ9NTI5 1447 aa9.78□□□□□ -0.84
MIA3-201ENST00000340535 CEP164Q9UPV0 1460 aa9.76□□□□□ -0.85
MIA3-201ENST00000340535 RBM19Q9Y4C8 960 aaKnown RBP9.75□□□□□ -0.85
MIA3-201ENST00000340535 PRDM2Q13029 1718 aa9.74□□□□□ -0.85
MIA3-201ENST00000340535 ERICH6BQ5W0A0 696 aa9.73□□□□□ -0.85
MIA3-201ENST00000340535 MSH5O43196 834 aa9.71□□□□□ -0.86
MIA3-201ENST00000340535 URB2Q14146 1524 aaKnown RBP9.71□□□□□ -0.86
MIA3-201ENST00000340535 SALL2Q9Y467 1007 aaPredicted RBP9.69□□□□□ -0.86
MIA3-201ENST00000340535 MRC2Q9UBG0 1479 aa9.68□□□□□ -0.86
MIA3-201ENST00000340535 CUX1P39880 1505 aa9.67□□□□□ -0.86
MIA3-201ENST00000340535 DEKP35659 375 aaKnown RBP9.67□□□□□ -0.86
MIA3-201ENST00000340535 WRNQ14191 1432 aaPredicted RBP eCLIP9.67□□□□□ -0.86
MIA3-201ENST00000340535 SYNJ1O43426 1573 aa9.67□□□□□ -0.86
MIA3-201ENST00000340535 THOC2Q8NI27 1593 aaKnown RBP9.67□□□□□ -0.86
MIA3-201ENST00000340535 TOPBP1Q92547 1522 aa9.65□□□□□ -0.86
MIA3-201ENST00000340535 FANCIQ9NVI1 1328 aa9.65□□□□□ -0.86
MIA3-201ENST00000340535 EIF5BO60841 1220 aaKnown RBP9.64□□□□□ -0.87
MIA3-201ENST00000340535 RAD54L2Q9Y4B4 1467 aa9.63□□□□□ -0.87
MIA3-201ENST00000340535 FGD5Q6ZNL6 1462 aa9.62□□□□□ -0.87
MIA3-201ENST00000340535 DNMBPQ6XZF7 1577 aa9.62□□□□□ -0.87
MIA3-201ENST00000340535 EHMT2Q96KQ7 1210 aa9.62□□□□□ -0.87
MIA3-201ENST00000340535 WDR62O43379 1518 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms