RNA–Protein interactions for RNA: ENST00000340353.11

TMEM135-202, Transcript of transmembrane protein 135, humanhuman

TSL 1 (best) BASIC

Gene TMEM135, Length 3,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM135-202ENST00000340353 NISCHQ9Y2I1 1504 aa16.38■□□□□ 0.21
TMEM135-202ENST00000340353 CCDC180Q9P1Z9 1646 aa14.48□□□□□ -0.09
TMEM135-202ENST00000340353 ABCC9O60706 1549 aa14.22□□□□□ -0.13
TMEM135-202ENST00000340353 DCAF8L2P0C7V8 631 aa13.91□□□□□ -0.18
TMEM135-202ENST00000340353 PELP1Q8IZL8 1130 aaKnown RBP13.8□□□□□ -0.2
TMEM135-202ENST00000340353 RB1CC1Q8TDY2 1594 aa13.65□□□□□ -0.22
TMEM135-202ENST00000340353 ZCCHC6Q5VYS8 1495 aaKnown RBP13.64□□□□□ -0.23
TMEM135-202ENST00000340353 NACADO15069 1562 aa13.62□□□□□ -0.23
TMEM135-202ENST00000340353 MYO15BQ96JP2 1530 aa13.5□□□□□ -0.25
TMEM135-202ENST00000340353 PRKCSHP14314 528 aaPredicted RBP13.49□□□□□ -0.25
TMEM135-202ENST00000340353 DCAF1Q9Y4B6 1507 aa13.48□□□□□ -0.25
TMEM135-202ENST00000340353 MYT1Q01538 1121 aa13.47□□□□□ -0.25
TMEM135-202ENST00000340353 PABPN1Q86U42 306 aaKnown RBP eCLIP13.34□□□□□ -0.27
TMEM135-202ENST00000340353 SCRIBQ14160 1630 aa13.33□□□□□ -0.28
TMEM135-202ENST00000340353 UNC13AQ9UPW8 1703 aa13.29□□□□□ -0.28
TMEM135-202ENST00000340353 SHROOM4Q9ULL8 1493 aa13.17□□□□□ -0.3
TMEM135-202ENST00000340353 BICRAQ9NZM4 1560 aa13.17□□□□□ -0.3
TMEM135-202ENST00000340353 BCL11AQ9H165 835 aa13.03□□□□□ -0.32
TMEM135-202ENST00000340353 PPARGC1BQ86YN6 1023 aaKnown RBP12.97□□□□□ -0.33
TMEM135-202ENST00000340353 FAM9AQ8IZU1 332 aaPredicted RBP12.94□□□□□ -0.34
TMEM135-202ENST00000340353 SCAF1Q9H7N4 1312 aaKnown RBP12.94□□□□□ -0.34
TMEM135-202ENST00000340353 DNAJC5BQ9UF47 199 aa12.93□□□□□ -0.34
TMEM135-202ENST00000340353 SLC24A1O60721 1099 aa12.91□□□□□ -0.34
TMEM135-202ENST00000340353 EIF4G1Q04637 1599 aaKnown RBP12.87□□□□□ -0.35
TMEM135-202ENST00000340353 TTBK1Q5TCY1 1321 aaPredicted RBP12.86□□□□□ -0.35
TMEM135-202ENST00000340353 CC2D2AQ9P2K1 1620 aa12.8□□□□□ -0.36
TMEM135-202ENST00000340353 CECR2Q9BXF3 1484 aa12.78□□□□□ -0.36
TMEM135-202ENST00000340353 HRCP23327 699 aa12.77□□□□□ -0.36
TMEM135-202ENST00000340353 ERICH6Q7L0X2 663 aa12.75□□□□□ -0.37
TMEM135-202ENST00000340353 BAZ1AQ9NRL2 1556 aaPredicted RBP12.71□□□□□ -0.37
TMEM135-202ENST00000340353 APLP2Q06481 763 aa12.7□□□□□ -0.38
TMEM135-202ENST00000340353 SMARCA4P51532 1647 aa12.69□□□□□ -0.38
TMEM135-202ENST00000340353 MROH2BQ7Z745 1585 aa12.64□□□□□ -0.39
TMEM135-202ENST00000340353 ATAD2BQ9ULI0 1458 aa12.61□□□□□ -0.39
TMEM135-202ENST00000340353 SMARCA2P51531 1590 aa12.61□□□□□ -0.39
TMEM135-202ENST00000340353 NCAPD3P42695 1498 aa12.56□□□□□ -0.4
TMEM135-202ENST00000340353 BAZ1BQ9UIG0 1483 aaKnown RBP12.56□□□□□ -0.4
TMEM135-202ENST00000340353 RSF1Q96T23 1441 aaPredicted RBP12.53□□□□□ -0.4
TMEM135-202ENST00000340353 WIZO95785 1651 aa12.52□□□□□ -0.4
TMEM135-202ENST00000340353 HMGXB3Q12766 1538 aa12.5□□□□□ -0.41
TMEM135-202ENST00000340353 PEG3Q9GZU2 1588 aa12.5□□□□□ -0.41
TMEM135-202ENST00000340353 SUPT5HO00267 1087 aaKnown RBP12.47□□□□□ -0.41
TMEM135-202ENST00000340353 PLEKHG5O94827 1062 aa12.45□□□□□ -0.42
TMEM135-202ENST00000340353 TOP2AP11388 1531 aaKnown RBP12.37□□□□□ -0.43
TMEM135-202ENST00000340353 PCGF6Q9BYE7 350 aa12.32□□□□□ -0.44
TMEM135-202ENST00000340353 CENPBP07199 599 aaPredicted RBP12.32□□□□□ -0.44
TMEM135-202ENST00000340353 EIF5BO60841 1220 aaKnown RBP12.31□□□□□ -0.44
TMEM135-202ENST00000340353 NESP48681 1621 aa12.3□□□□□ -0.44
TMEM135-202ENST00000340353 GTF3C3Q9Y5Q9 886 aa12.3□□□□□ -0.44
TMEM135-202ENST00000340353 ERCC6Q03468 1493 aa12.29□□□□□ -0.44
TMEM135-202ENST00000340353 ANO8Q9HCE9 1232 aaPredicted RBP12.26□□□□□ -0.45
TMEM135-202ENST00000340353 CADPSQ9ULU8 1353 aa12.25□□□□□ -0.45
TMEM135-202ENST00000340353 CCDC88BA6NC98 1476 aa12.25□□□□□ -0.45
TMEM135-202ENST00000340353 LAMC3Q9Y6N6 1575 aa12.24□□□□□ -0.45
TMEM135-202ENST00000340353 PDS5BQ9NTI5 1447 aa12.21□□□□□ -0.46
TMEM135-202ENST00000340353 NEUROD1Q13562 356 aa12.2□□□□□ -0.46
TMEM135-202ENST00000340353 CSRNP3Q8WYN3 585 aa12.2□□□□□ -0.46
TMEM135-202ENST00000340353 CFTRP13569 1480 aa12.16□□□□□ -0.46
TMEM135-202ENST00000340353 DAXXQ9UER7 740 aaPredicted RBP12.14□□□□□ -0.47
TMEM135-202ENST00000340353 KIF21AQ7Z4S6 1674 aa12.13□□□□□ -0.47
TMEM135-202ENST00000340353 FANCD2Q9BXW9 1451 aa12.12□□□□□ -0.47
TMEM135-202ENST00000340353 CCDC136Q96JN2 1154 aa12.11□□□□□ -0.47
TMEM135-202ENST00000340353 ACIN1Q9UKV3 1341 aaKnown RBP12.11□□□□□ -0.47
TMEM135-202ENST00000340353 CEP164Q9UPV0 1460 aa12.11□□□□□ -0.47
TMEM135-202ENST00000340353 AEBP2Q6ZN18 517 aaPredicted RBP12.08□□□□□ -0.48
TMEM135-202ENST00000340353 ANP32EQ9BTT0 268 aa12.06□□□□□ -0.48
TMEM135-202ENST00000340353 PRDM2Q13029 1718 aa12.05□□□□□ -0.48
TMEM135-202ENST00000340353 MRC2Q9UBG0 1479 aa12.05□□□□□ -0.48
TMEM135-202ENST00000340353 THOC2Q8NI27 1593 aaKnown RBP12.02□□□□□ -0.49
TMEM135-202ENST00000340353 CUX2O14529 1486 aa12.01□□□□□ -0.49
TMEM135-202ENST00000340353 PODXL2Q9NZ53 605 aa11.97□□□□□ -0.49
TMEM135-202ENST00000340353 URB2Q14146 1524 aaKnown RBP11.96□□□□□ -0.49
TMEM135-202ENST00000340353 WDR62O43379 1518 aa11.96□□□□□ -0.5
TMEM135-202ENST00000340353 ABCC8Q09428 1581 aa11.92□□□□□ -0.5
TMEM135-202ENST00000340353 TOPBP1Q92547 1522 aa11.92□□□□□ -0.5
TMEM135-202ENST00000340353 SALL2Q9Y467 1007 aaPredicted RBP11.9□□□□□ -0.5
TMEM135-202ENST00000340353 DNMBPQ6XZF7 1577 aa11.9□□□□□ -0.5
TMEM135-202ENST00000340353 WRNQ14191 1432 aaPredicted RBP eCLIP11.86□□□□□ -0.51
TMEM135-202ENST00000340353 CUX1P39880 1505 aa11.85□□□□□ -0.51
TMEM135-202ENST00000340353 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.84□□□□□ -0.51
TMEM135-202ENST00000340353 FGD5Q6ZNL6 1462 aa11.83□□□□□ -0.52
TMEM135-202ENST00000340353 POLA1P09884 1462 aaPredicted RBP11.83□□□□□ -0.52
TMEM135-202ENST00000340353 IFT140Q96RY7 1462 aa11.82□□□□□ -0.52
TMEM135-202ENST00000340353 SOGA1O94964 1423 aa11.82□□□□□ -0.52
TMEM135-202ENST00000340353 UBE2Q2Q8WVN8 375 aa11.8□□□□□ -0.52
TMEM135-202ENST00000340353 RAD54L2Q9Y4B4 1467 aa11.8□□□□□ -0.52
TMEM135-202ENST00000340353 PKNOX2Q96KN3 472 aa11.79□□□□□ -0.52
TMEM135-202ENST00000340353 SYNJ1O43426 1573 aa11.78□□□□□ -0.52
TMEM135-202ENST00000340353 ZNF608Q9ULD9 1512 aaPredicted RBP11.78□□□□□ -0.52
TMEM135-202ENST00000340353 YTHDC1Q96MU7 727 aaKnown RBP11.78□□□□□ -0.52
TMEM135-202ENST00000340353 TDRD9Q8NDG6 1382 aaKnown RBP11.77□□□□□ -0.53
TMEM135-202ENST00000340353 TOP2BQ02880 1626 aa11.76□□□□□ -0.53
TMEM135-202ENST00000340353 AQRO60306 1485 aaKnown RBP eCLIP11.75□□□□□ -0.531e-7■■■■□ 21.1
TMEM135-202ENST00000340353 BIVM-ERCC5R4GMW8 1640 aa11.74□□□□□ -0.53
TMEM135-202ENST00000340353 TARBP1Q13395 1621 aaKnown RBP11.74□□□□□ -0.53
TMEM135-202ENST00000340353 TRIM41Q8WV44 630 aa11.74□□□□□ -0.53
TMEM135-202ENST00000340353 FBLN2P98095 1184 aa11.73□□□□□ -0.53
TMEM135-202ENST00000340353 EIF4G3O43432 1585 aaKnown RBP11.72□□□□□ -0.53
TMEM135-202ENST00000340353 ABCA10Q8WWZ4 1543 aa11.68□□□□□ -0.54
TMEM135-202ENST00000340353 GAPVD1Q14C86 1478 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms