RNA–Protein interactions for RNA: ENST00000340135.3

AC090099.1-201, humanhuman

TSL 2 BASIC

Gene AC090099.1, Length 1,723 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC090099.1-201ENST00000340135 NISCHQ9Y2I1 1504 aa26.33■■□□□ 1.8
AC090099.1-201ENST00000340135 CCDC180Q9P1Z9 1646 aa23.26■■□□□ 1.31
AC090099.1-201ENST00000340135 ABCC9O60706 1549 aa23.04■■□□□ 1.28
AC090099.1-201ENST00000340135 DCAF8L2P0C7V8 631 aa22.34■■□□□ 1.17
AC090099.1-201ENST00000340135 RB1CC1Q8TDY2 1594 aa22.01■■□□□ 1.11
AC090099.1-201ENST00000340135 NACADO15069 1562 aa21.97■■□□□ 1.11
AC090099.1-201ENST00000340135 ZCCHC6Q5VYS8 1495 aaKnown RBP21.9■■□□□ 1.1
AC090099.1-201ENST00000340135 MYO15BQ96JP2 1530 aa21.75■■□□□ 1.07
AC090099.1-201ENST00000340135 DCAF1Q9Y4B6 1507 aa21.67■■□□□ 1.06
AC090099.1-201ENST00000340135 PABPN1Q86U42 306 aaKnown RBP eCLIP21.63■■□□□ 1.05
AC090099.1-201ENST00000340135 UNC13AQ9UPW8 1703 aa21.44■■□□□ 1.02
AC090099.1-201ENST00000340135 SCRIBQ14160 1630 aa21.42■■□□□ 1.02
AC090099.1-201ENST00000340135 BICRAQ9NZM4 1560 aa21.33■■□□□ 1.01
AC090099.1-201ENST00000340135 DNAJC5BQ9UF47 199 aa21.21■□□□□ 0.99
AC090099.1-201ENST00000340135 SHROOM4Q9ULL8 1493 aa21.04■□□□□ 0.96
AC090099.1-201ENST00000340135 EIF4G1Q04637 1599 aaKnown RBP20.81■□□□□ 0.92
AC090099.1-201ENST00000340135 CC2D2AQ9P2K1 1620 aa20.74■□□□□ 0.91
AC090099.1-201ENST00000340135 CECR2Q9BXF3 1484 aa20.67■□□□□ 0.9
AC090099.1-201ENST00000340135 SMARCA4P51532 1647 aa20.4■□□□□ 0.86
AC090099.1-201ENST00000340135 BAZ1AQ9NRL2 1556 aaPredicted RBP20.39■□□□□ 0.85
AC090099.1-201ENST00000340135 ATAD2BQ9ULI0 1458 aa20.35■□□□□ 0.85
AC090099.1-201ENST00000340135 MROH2BQ7Z745 1585 aa20.33■□□□□ 0.84
AC090099.1-201ENST00000340135 NCAPD3P42695 1498 aa20.3■□□□□ 0.84
AC090099.1-201ENST00000340135 SMARCA2P51531 1590 aa20.27■□□□□ 0.84
AC090099.1-201ENST00000340135 BAZ1BQ9UIG0 1483 aaKnown RBP20.2■□□□□ 0.82
AC090099.1-201ENST00000340135 HMGXB3Q12766 1538 aa20.15■□□□□ 0.82
AC090099.1-201ENST00000340135 PEG3Q9GZU2 1588 aa20.13■□□□□ 0.81
AC090099.1-201ENST00000340135 RSF1Q96T23 1441 aaPredicted RBP20.1■□□□□ 0.81
AC090099.1-201ENST00000340135 WIZO95785 1651 aa20.1■□□□□ 0.81
AC090099.1-201ENST00000340135 NESP48681 1621 aa19.91■□□□□ 0.78
AC090099.1-201ENST00000340135 ERCC6Q03468 1493 aa19.87■□□□□ 0.77
AC090099.1-201ENST00000340135 TOP2AP11388 1531 aaKnown RBP19.84■□□□□ 0.77
AC090099.1-201ENST00000340135 SUPT5HO00267 1087 aaKnown RBP19.82■□□□□ 0.76
AC090099.1-201ENST00000340135 CADPSQ9ULU8 1353 aa19.78■□□□□ 0.76
AC090099.1-201ENST00000340135 LAMC3Q9Y6N6 1575 aa19.74■□□□□ 0.75
AC090099.1-201ENST00000340135 PDS5BQ9NTI5 1447 aa19.7■□□□□ 0.74
AC090099.1-201ENST00000340135 CCDC88BA6NC98 1476 aa19.68■□□□□ 0.74
AC090099.1-201ENST00000340135 CFTRP13569 1480 aa19.61■□□□□ 0.73
AC090099.1-201ENST00000340135 KIF21AQ7Z4S6 1674 aa19.57■□□□□ 0.72
AC090099.1-201ENST00000340135 FANCD2Q9BXW9 1451 aa19.55■□□□□ 0.72
AC090099.1-201ENST00000340135 CUX2O14529 1486 aa19.53■□□□□ 0.72
AC090099.1-201ENST00000340135 CEP164Q9UPV0 1460 aa19.51■□□□□ 0.71
AC090099.1-201ENST00000340135 THOC2Q8NI27 1593 aaKnown RBP19.48■□□□□ 0.71
AC090099.1-201ENST00000340135 MRC2Q9UBG0 1479 aa19.46■□□□□ 0.71
AC090099.1-201ENST00000340135 WDR62O43379 1518 aa19.35■□□□□ 0.69
AC090099.1-201ENST00000340135 URB2Q14146 1524 aaKnown RBP19.32■□□□□ 0.68
AC090099.1-201ENST00000340135 PRDM2Q13029 1718 aa19.29■□□□□ 0.68
AC090099.1-201ENST00000340135 TOPBP1Q92547 1522 aa19.21■□□□□ 0.67
AC090099.1-201ENST00000340135 ABCC8Q09428 1581 aa19.16■□□□□ 0.66
AC090099.1-201ENST00000340135 DNMBPQ6XZF7 1577 aa19.14■□□□□ 0.65
AC090099.1-201ENST00000340135 IFT140Q96RY7 1462 aa19.08■□□□□ 0.64
AC090099.1-201ENST00000340135 DNAJC5Q9H3Z4 198 aa19.06■□□□□ 0.64
AC090099.1-201ENST00000340135 POLA1P09884 1462 aaPredicted RBP19.05■□□□□ 0.64
AC090099.1-201ENST00000340135 CUX1P39880 1505 aa19.05■□□□□ 0.64
AC090099.1-201ENST00000340135 ZNF608Q9ULD9 1512 aaPredicted RBP19.05■□□□□ 0.64
AC090099.1-201ENST00000340135 RAD54L2Q9Y4B4 1467 aa19.04■□□□□ 0.64
AC090099.1-201ENST00000340135 SOGA1O94964 1423 aa19.03■□□□□ 0.64
AC090099.1-201ENST00000340135 FGD5Q6ZNL6 1462 aa19.01■□□□□ 0.63
AC090099.1-201ENST00000340135 AQRO60306 1485 aaKnown RBP eCLIP18.99■□□□□ 0.63
AC090099.1-201ENST00000340135 TDRD9Q8NDG6 1382 aaKnown RBP18.98■□□□□ 0.63
AC090099.1-201ENST00000340135 WRNQ14191 1432 aaPredicted RBP eCLIP18.97■□□□□ 0.63
AC090099.1-201ENST00000340135 TARBP1Q13395 1621 aaKnown RBP18.93■□□□□ 0.62
AC090099.1-201ENST00000340135 FBLN2P98095 1184 aa18.91■□□□□ 0.62
AC090099.1-201ENST00000340135 EIF4G3O43432 1585 aaKnown RBP18.9■□□□□ 0.62
AC090099.1-201ENST00000340135 SYNJ1O43426 1573 aa18.88■□□□□ 0.61
AC090099.1-201ENST00000340135 OSCARQ8IYS5 282 aa18.88■□□□□ 0.61
AC090099.1-201ENST00000340135 TOP2BQ02880 1626 aa18.84■□□□□ 0.61
AC090099.1-201ENST00000340135 BIVM-ERCC5R4GMW8 1640 aa18.8■□□□□ 0.6
AC090099.1-201ENST00000340135 ABCA10Q8WWZ4 1543 aa18.79■□□□□ 0.6
AC090099.1-201ENST00000340135 GAPVD1Q14C86 1478 aa18.78■□□□□ 0.6
AC090099.1-201ENST00000340135 CHMP7Q8WUX9 453 aaPredicted RBP18.77■□□□□ 0.6
AC090099.1-201ENST00000340135 SNAPC4Q5SXM2 1469 aa18.76■□□□□ 0.59
AC090099.1-201ENST00000340135 GRIN2BQ13224 1484 aa18.75■□□□□ 0.59
AC090099.1-201ENST00000340135 WDR97A6NE52 1622 aa18.71■□□□□ 0.59
AC090099.1-201ENST00000340135 MAGI1Q96QZ7 1491 aaPredicted RBP18.67■□□□□ 0.58
AC090099.1-201ENST00000340135 ABCA5Q8WWZ7 1642 aa18.66■□□□□ 0.58
AC090099.1-201ENST00000340135 TRIM41Q8WV44 630 aa18.66■□□□□ 0.58
AC090099.1-201ENST00000340135 CHD1O14646 1710 aa18.63■□□□□ 0.57
AC090099.1-201ENST00000340135 PBRM1Q86U86 1689 aa18.63■□□□□ 0.57
AC090099.1-201ENST00000340135 SYNJ2O15056 1496 aa18.62■□□□□ 0.57
AC090099.1-201ENST00000340135 KIF27Q86VH2 1401 aa18.58■□□□□ 0.56
AC090099.1-201ENST00000340135 FHAD1B1AJZ9 1412 aa18.54■□□□□ 0.56
AC090099.1-201ENST00000340135 ERICH3Q5RHP9 1530 aa18.54■□□□□ 0.56
AC090099.1-201ENST00000340135 IGF1RP08069 1367 aa18.53■□□□□ 0.56
AC090099.1-201ENST00000340135 GRIN2AQ12879 1464 aa18.51■□□□□ 0.55
AC090099.1-201ENST00000340135 ADAMTS12P58397 1594 aa18.5■□□□□ 0.55
AC090099.1-201ENST00000340135 CYB5RLQ6IPT4 315 aa18.48■□□□□ 0.55
AC090099.1-201ENST00000340135 ARHGEF11O15085 1522 aa18.47■□□□□ 0.55
AC090099.1-201ENST00000340135 RUSC2Q8N2Y8 1516 aa18.45■□□□□ 0.54
AC090099.1-201ENST00000340135 RIMBP3CA6NJZ7 1639 aa18.44■□□□□ 0.54
AC090099.1-201ENST00000340135 RIMBP3BA6NNM3 1639 aa18.44■□□□□ 0.54
AC090099.1-201ENST00000340135 RIMBP3Q9UFD9 1639 aa18.44■□□□□ 0.54
AC090099.1-201ENST00000340135 CARMIL1Q5VZK9 1371 aa18.43■□□□□ 0.54
AC090099.1-201ENST00000340135 CLASP1Q7Z460 1538 aa18.43■□□□□ 0.54
AC090099.1-201ENST00000340135 CEP170Q5SW79 1584 aa18.4■□□□□ 0.54
AC090099.1-201ENST00000340135 NUP160Q12769 1436 aa18.39■□□□□ 0.53
AC090099.1-201ENST00000340135 CHIC1Q5VXU3 224 aa18.37■□□□□ 0.53
AC090099.1-201ENST00000340135 FAM9AQ8IZU1 332 aaPredicted RBP18.36■□□□□ 0.53
AC090099.1-201ENST00000340135 JPH4Q96JJ6 628 aa18.35■□□□□ 0.53
AC090099.1-201ENST00000340135 CUL7Q14999 1698 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 128.2 ms