RNA–Protein interactions for RNA: ENST00000337132.9

NECAP2-201, Transcript of NECAP endocytosis associated 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECAP2, Length 2,070 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP2-201ENST00000337132 NISCHQ9Y2I1 1504 aa31.13■■■□□ 2.57
NECAP2-201ENST00000337132 CCDC180Q9P1Z9 1646 aa27.36■■□□□ 1.97
NECAP2-201ENST00000337132 SHROOM4Q9ULL8 1493 aa26.78■■□□□ 1.88
NECAP2-201ENST00000337132 SUPT5HO00267 1087 aaKnown RBP26.58■■□□□ 1.85
NECAP2-201ENST00000337132 ZCCHC6Q5VYS8 1495 aaKnown RBP26.42■■□□□ 1.82
NECAP2-201ENST00000337132 HRCP23327 699 aa26.25■■□□□ 1.79
NECAP2-201ENST00000337132 ABCC9O60706 1549 aa26.15■■□□□ 1.78
NECAP2-201ENST00000337132 CHIC1Q5VXU3 224 aa26.12■■□□□ 1.77
NECAP2-201ENST00000337132 MYO15BQ96JP2 1530 aa26.02■■□□□ 1.76
NECAP2-201ENST00000337132 PCGF6Q9BYE7 350 aa25.82■■□□□ 1.72
NECAP2-201ENST00000337132 DCAF8L2P0C7V8 631 aa25.78■■□□□ 1.72
NECAP2-201ENST00000337132 DCAF1Q9Y4B6 1507 aa25.72■■□□□ 1.71
NECAP2-201ENST00000337132 NACADO15069 1562 aa25.53■■□□□ 1.68
NECAP2-201ENST00000337132 PPARGC1BQ86YN6 1023 aaKnown RBP25.43■■□□□ 1.66
NECAP2-201ENST00000337132 RB1CC1Q8TDY2 1594 aa25.42■■□□□ 1.66
NECAP2-201ENST00000337132 TRIM26Q12899 539 aaPredicted RBP25.34■■□□□ 1.65
NECAP2-201ENST00000337132 LOC105371045A0A1W2PR82 267 aa25.29■■□□□ 1.64
NECAP2-201ENST00000337132 ZEB1P37275 1124 aaPredicted RBP25.16■■□□□ 1.62
NECAP2-201ENST00000337132 SCRIBQ14160 1630 aa25.09■■□□□ 1.61
NECAP2-201ENST00000337132 UNC13AQ9UPW8 1703 aa24.97■■□□□ 1.59
NECAP2-201ENST00000337132 PELP1Q8IZL8 1130 aaKnown RBP24.89■■□□□ 1.57
NECAP2-201ENST00000337132 TRIM41Q8WV44 630 aa24.81■■□□□ 1.56
NECAP2-201ENST00000337132 RSF1Q96T23 1441 aaPredicted RBP24.8■■□□□ 1.56
NECAP2-201ENST00000337132 BICRAQ9NZM4 1560 aa24.65■■□□□ 1.54
NECAP2-201ENST00000337132 PABPN1Q86U42 306 aaKnown RBP eCLIP24.55■■□□□ 1.52
NECAP2-201ENST00000337132 FAM9AQ8IZU1 332 aaPredicted RBP24.51■■□□□ 1.51
NECAP2-201ENST00000337132 SCAF1Q9H7N4 1312 aaKnown RBP24.42■■□□□ 1.5
NECAP2-201ENST00000337132 EHMT2Q96KQ7 1210 aa24.2■■□□□ 1.47
NECAP2-201ENST00000337132 CECR2Q9BXF3 1484 aa24.19■■□□□ 1.46
NECAP2-201ENST00000337132 CCER1Q8TC90 406 aaPredicted RBP24.17■■□□□ 1.46
NECAP2-201ENST00000337132 MROH2BQ7Z745 1585 aa24.16■■□□□ 1.46
NECAP2-201ENST00000337132 ACIN1Q9UKV3 1341 aaKnown RBP24.13■■□□□ 1.45
NECAP2-201ENST00000337132 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.07■■□□□ 1.44
NECAP2-201ENST00000337132 BAZ1AQ9NRL2 1556 aaPredicted RBP24.07■■□□□ 1.44
NECAP2-201ENST00000337132 WIZO95785 1651 aa24.05■■□□□ 1.44
NECAP2-201ENST00000337132 CENPBP07199 599 aaPredicted RBP24.05■■□□□ 1.44
NECAP2-201ENST00000337132 SMARCA4P51532 1647 aa24.03■■□□□ 1.44
NECAP2-201ENST00000337132 DIEXFQ68CQ4 756 aaKnown RBP23.98■■□□□ 1.43
NECAP2-201ENST00000337132 WRNQ14191 1432 aaPredicted RBP eCLIP23.97■■□□□ 1.432e-6■■■■□ 22.3
NECAP2-201ENST00000337132 EIF4G1Q04637 1599 aaKnown RBP23.95■■□□□ 1.42
NECAP2-201ENST00000337132 NEUROD1Q13562 356 aa23.95■■□□□ 1.42
NECAP2-201ENST00000337132 MYT1Q01538 1121 aa23.9■■□□□ 1.42
NECAP2-201ENST00000337132 GTF3C3Q9Y5Q9 886 aa23.82■■□□□ 1.4
NECAP2-201ENST00000337132 CEP162Q5TB80 1403 aa23.78■■□□□ 1.4
NECAP2-201ENST00000337132 TNIKQ9UKE5 1360 aa23.78■■□□□ 1.4
NECAP2-201ENST00000337132 TOP2AP11388 1531 aaKnown RBP23.77■■□□□ 1.39
NECAP2-201ENST00000337132 EEA1Q15075 1411 aa23.76■■□□□ 1.39
NECAP2-201ENST00000337132 PEG3Q9GZU2 1588 aa23.73■■□□□ 1.39
NECAP2-201ENST00000337132 CCDC88BA6NC98 1476 aa23.7■■□□□ 1.39
NECAP2-201ENST00000337132 ZNF316A6NFI3 1004 aaPredicted RBP23.7■■□□□ 1.38
NECAP2-201ENST00000337132 CC2D2AQ9P2K1 1620 aa23.69■■□□□ 1.38
NECAP2-201ENST00000337132 SMARCA2P51531 1590 aa23.69■■□□□ 1.38
NECAP2-201ENST00000337132 ATAD2BQ9ULI0 1458 aa23.68■■□□□ 1.38
NECAP2-201ENST00000337132 ABCC8Q09428 1581 aa23.67■■□□□ 1.38
NECAP2-201ENST00000337132 CSRNP3Q8WYN3 585 aa23.62■■□□□ 1.37
NECAP2-201ENST00000337132 TTBK1Q5TCY1 1321 aaPredicted RBP23.59■■□□□ 1.37
NECAP2-201ENST00000337132 SOGA1O94964 1423 aa23.59■■□□□ 1.37
NECAP2-201ENST00000337132 UBTFP17480 764 aaKnown RBP23.56■■□□□ 1.36
NECAP2-201ENST00000337132 GOLGA3Q08378 1498 aa23.55■■□□□ 1.36
NECAP2-201ENST00000337132 BAZ1BQ9UIG0 1483 aaKnown RBP23.55■■□□□ 1.36
NECAP2-201ENST00000337132 NCAPD3P42695 1498 aa23.53■■□□□ 1.36
NECAP2-201ENST00000337132 HMGXB3Q12766 1538 aa23.51■■□□□ 1.35
NECAP2-201ENST00000337132 RUSC2Q8N2Y8 1516 aa23.39■■□□□ 1.33
NECAP2-201ENST00000337132 CEP164Q9UPV0 1460 aa23.36■■□□□ 1.33
NECAP2-201ENST00000337132 DNAJC5BQ9UF47 199 aa23.35■■□□□ 1.33
NECAP2-201ENST00000337132 YTHDC1Q96MU7 727 aaKnown RBP23.34■■□□□ 1.33
NECAP2-201ENST00000337132 MIER1Q8N108 512 aa23.31■■□□□ 1.32
NECAP2-201ENST00000337132 KIF21BO75037 1637 aa23.31■■□□□ 1.32
NECAP2-201ENST00000337132 HNRNPUL2Q1KMD3 747 aaKnown RBP23.28■■□□□ 1.32
NECAP2-201ENST00000337132 APLP2Q06481 763 aa23.28■■□□□ 1.32
NECAP2-201ENST00000337132 CLIP1P30622 1438 aa23.26■■□□□ 1.31
NECAP2-201ENST00000337132 VPS8Q8N3P4 1428 aa23.24■■□□□ 1.31
NECAP2-201ENST00000337132 CLSPNQ9HAW4 1339 aa23.2■■□□□ 1.3
NECAP2-201ENST00000337132 SYNJ1O43426 1573 aa23.11■■□□□ 1.29
NECAP2-201ENST00000337132 RAPGEF2Q9Y4G8 1499 aa23■■□□□ 1.27
NECAP2-201ENST00000337132 DHX57Q6P158 1386 aaKnown RBP22.93■■□□□ 1.26
NECAP2-201ENST00000337132 CFTRP13569 1480 aa22.91■■□□□ 1.26
NECAP2-201ENST00000337132 PRDM2Q13029 1718 aa22.9■■□□□ 1.26
NECAP2-201ENST00000337132 CADPSQ9ULU8 1353 aa22.89■■□□□ 1.26
NECAP2-201ENST00000337132 ERICH3Q5RHP9 1530 aa22.88■■□□□ 1.25
NECAP2-201ENST00000337132 TOP2BQ02880 1626 aa22.86■■□□□ 1.25
NECAP2-201ENST00000337132 NESP48681 1621 aa22.85■■□□□ 1.25
NECAP2-201ENST00000337132 LAMC3Q9Y6N6 1575 aa22.84■■□□□ 1.25
NECAP2-201ENST00000337132 SUPT16HQ9Y5B9 1047 aaKnown RBP22.83■■□□□ 1.24
NECAP2-201ENST00000337132 RANGAP1P46060 587 aaPredicted RBP22.82■■□□□ 1.24
NECAP2-201ENST00000337132 RRBP1Q9P2E9 1410 aaKnown RBP22.78■■□□□ 1.24
NECAP2-201ENST00000337132 PRXQ9BXM0 1461 aa22.78■■□□□ 1.24
NECAP2-201ENST00000337132 BIVM-ERCC5R4GMW8 1640 aa22.77■■□□□ 1.24
NECAP2-201ENST00000337132 ARAP1Q96P48 1450 aa22.76■■□□□ 1.23
NECAP2-201ENST00000337132 CUX2O14529 1486 aa22.75■■□□□ 1.23
NECAP2-201ENST00000337132 KANK4Q5T7N3 995 aaPredicted RBP22.69■■□□□ 1.22
NECAP2-201ENST00000337132 FANCD2Q9BXW9 1451 aa22.67■■□□□ 1.22
NECAP2-201ENST00000337132 CCNB3Q8WWL7 1395 aa22.66■■□□□ 1.22
NECAP2-201ENST00000337132 KIF21AQ7Z4S6 1674 aa22.64■■□□□ 1.21
NECAP2-201ENST00000337132 PDS5BQ9NTI5 1447 aa22.63■■□□□ 1.21
NECAP2-201ENST00000337132 KIF27Q86VH2 1401 aa22.61■■□□□ 1.21
NECAP2-201ENST00000337132 TSHZ2Q9NRE2 1034 aa22.58■■□□□ 1.2
NECAP2-201ENST00000337132 ARHGAP35Q9NRY4 1499 aa22.5■■□□□ 1.19
NECAP2-201ENST00000337132 ANP32EQ9BTT0 268 aa22.5■■□□□ 1.19
NECAP2-201ENST00000337132 CUX1P39880 1505 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms