RNA–Protein interactions for RNA: ENST00000336898.7

GDPD5-201, Transcript of glycerophosphodiester phosphodiesterase domain containing 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GDPD5, Length 3,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD5-201ENST00000336898 NISCHQ9Y2I1 1504 aa27.28■■□□□ 1.96
GDPD5-201ENST00000336898 DCAF8L2P0C7V8 631 aa24.49■■□□□ 1.51
GDPD5-201ENST00000336898 SHROOM4Q9ULL8 1493 aa24.47■■□□□ 1.51
GDPD5-201ENST00000336898 SUPT5HO00267 1087 aaKnown RBP24.1■■□□□ 1.45
GDPD5-201ENST00000336898 PPARGC1BQ86YN6 1023 aaKnown RBP23.58■■□□□ 1.37
GDPD5-201ENST00000336898 PCGF6Q9BYE7 350 aa23.47■■□□□ 1.35
GDPD5-201ENST00000336898 HRCP23327 699 aa23.22■■□□□ 1.31
GDPD5-201ENST00000336898 ABCC9O60706 1549 aa22.98■■□□□ 1.27
GDPD5-201ENST00000336898 ZCCHC6Q5VYS8 1495 aaKnown RBP22.94■■□□□ 1.26
GDPD5-201ENST00000336898 CHIC1Q5VXU3 224 aa22.94■■□□□ 1.26
GDPD5-201ENST00000336898 CCDC180Q9P1Z9 1646 aa22.9■■□□□ 1.26
GDPD5-201ENST00000336898 EHMT2Q96KQ7 1210 aa22.9■■□□□ 1.26
GDPD5-201ENST00000336898 MYO15BQ96JP2 1530 aa22.89■■□□□ 1.25
GDPD5-201ENST00000336898 LOC105371045A0A1W2PR82 267 aa22.71■■□□□ 1.23
GDPD5-201ENST00000336898 FAM9AQ8IZU1 332 aaPredicted RBP22.54■■□□□ 1.2
GDPD5-201ENST00000336898 PELP1Q8IZL8 1130 aaKnown RBP22.37■■□□□ 1.17
GDPD5-201ENST00000336898 SCAF1Q9H7N4 1312 aaKnown RBP22.34■■□□□ 1.17
GDPD5-201ENST00000336898 SCRIBQ14160 1630 aa22.26■■□□□ 1.15
GDPD5-201ENST00000336898 PABPN1Q86U42 306 aaKnown RBP eCLIP22.26■■□□□ 1.153e-7■□□□□ 10.5
GDPD5-201ENST00000336898 TRIM41Q8WV44 630 aa22.07■■□□□ 1.12
GDPD5-201ENST00000336898 TTBK1Q5TCY1 1321 aaPredicted RBP22.04■■□□□ 1.12
GDPD5-201ENST00000336898 YTHDC1Q96MU7 727 aaKnown RBP21.94■■□□□ 1.1
GDPD5-201ENST00000336898 TRIM26Q12899 539 aaPredicted RBP21.92■■□□□ 1.1
GDPD5-201ENST00000336898 GTF3C3Q9Y5Q9 886 aa21.87■■□□□ 1.09
GDPD5-201ENST00000336898 DCAF1Q9Y4B6 1507 aa21.83■■□□□ 1.08
GDPD5-201ENST00000336898 RSF1Q96T23 1441 aaPredicted RBP21.83■■□□□ 1.08
GDPD5-201ENST00000336898 NEUROD1Q13562 356 aa21.8■■□□□ 1.08
GDPD5-201ENST00000336898 CECR2Q9BXF3 1484 aa21.71■■□□□ 1.07
GDPD5-201ENST00000336898 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.69■■□□□ 1.06
GDPD5-201ENST00000336898 NACADO15069 1562 aa21.63■■□□□ 1.05
GDPD5-201ENST00000336898 RB1CC1Q8TDY2 1594 aa21.62■■□□□ 1.05
GDPD5-201ENST00000336898 CCER1Q8TC90 406 aaPredicted RBP21.62■■□□□ 1.05
GDPD5-201ENST00000336898 ACIN1Q9UKV3 1341 aaKnown RBP21.61■■□□□ 1.05
GDPD5-201ENST00000336898 RANGAP1P46060 587 aaPredicted RBP21.6■■□□□ 1.05
GDPD5-201ENST00000336898 ZEB1P37275 1124 aaPredicted RBP21.57■■□□□ 1.04
GDPD5-201ENST00000336898 CENPBP07199 599 aaPredicted RBP21.52■■□□□ 1.04
GDPD5-201ENST00000336898 MROH2BQ7Z745 1585 aa21.42■■□□□ 1.02
GDPD5-201ENST00000336898 DIEXFQ68CQ4 756 aaKnown RBP21.42■■□□□ 1.02
GDPD5-201ENST00000336898 MYT1Q01538 1121 aa21.37■■□□□ 1.01
GDPD5-201ENST00000336898 UBTFP17480 764 aaKnown RBP21.32■■□□□ 1
GDPD5-201ENST00000336898 WIZO95785 1651 aa21.28■■□□□ 1
GDPD5-201ENST00000336898 ABCC8Q09428 1581 aa21.06■□□□□ 0.96
GDPD5-201ENST00000336898 CCDC88BA6NC98 1476 aa21■□□□□ 0.95
GDPD5-201ENST00000336898 SOGA1O94964 1423 aa20.97■□□□□ 0.95
GDPD5-201ENST00000336898 BAZ1AQ9NRL2 1556 aaPredicted RBP20.96■□□□□ 0.95
GDPD5-201ENST00000336898 BCANQ96GW7 911 aa20.94■□□□□ 0.94
GDPD5-201ENST00000336898 UNC13AQ9UPW8 1703 aa20.94■□□□□ 0.94
GDPD5-201ENST00000336898 RUSC2Q8N2Y8 1516 aa20.93■□□□□ 0.94
GDPD5-201ENST00000336898 HNRNPUL2Q1KMD3 747 aaKnown RBP20.92■□□□□ 0.94
GDPD5-201ENST00000336898 BICRAQ9NZM4 1560 aa20.9■□□□□ 0.94
GDPD5-201ENST00000336898 MIER1Q8N108 512 aa20.87■□□□□ 0.93
GDPD5-201ENST00000336898 APLP2Q06481 763 aa20.84■□□□□ 0.93
GDPD5-201ENST00000336898 SMARCA4P51532 1647 aa20.83■□□□□ 0.92
GDPD5-201ENST00000336898 CSRNP3Q8WYN3 585 aa20.8■□□□□ 0.92
GDPD5-201ENST00000336898 BCL11AQ9H165 835 aa20.76■□□□□ 0.91
GDPD5-201ENST00000336898 CEP162Q5TB80 1403 aa20.74■□□□□ 0.91
GDPD5-201ENST00000336898 BAZ1BQ9UIG0 1483 aaKnown RBP20.71■□□□□ 0.91
GDPD5-201ENST00000336898 ZNF316A6NFI3 1004 aaPredicted RBP20.7■□□□□ 0.9
GDPD5-201ENST00000336898 ATP1B4Q9UN42 357 aaPredicted RBP20.69■□□□□ 0.9
GDPD5-201ENST00000336898 ITGAEP38570 1179 aa20.69■□□□□ 0.9
GDPD5-201ENST00000336898 ATAD2BQ9ULI0 1458 aa20.64■□□□□ 0.9
GDPD5-201ENST00000336898 SMARCA2P51531 1590 aa20.64■□□□□ 0.9
GDPD5-201ENST00000336898 DNAJC5BQ9UF47 199 aa20.64■□□□□ 0.89
GDPD5-201ENST00000336898 EIF4G1Q04637 1599 aaKnown RBP20.63■□□□□ 0.89
GDPD5-201ENST00000336898 TOP2AP11388 1531 aaKnown RBP20.62■□□□□ 0.89
GDPD5-201ENST00000336898 TNIKQ9UKE5 1360 aa20.52■□□□□ 0.87
GDPD5-201ENST00000336898 WRNQ14191 1432 aaPredicted RBP eCLIP20.48■□□□□ 0.87
GDPD5-201ENST00000336898 ANP32EQ9BTT0 268 aa20.45■□□□□ 0.86
GDPD5-201ENST00000336898 SUPT16HQ9Y5B9 1047 aaKnown RBP20.41■□□□□ 0.86
GDPD5-201ENST00000336898 P3H3Q8IVL6 736 aa20.4■□□□□ 0.86
GDPD5-201ENST00000336898 TSHZ2Q9NRE2 1034 aa20.36■□□□□ 0.85
GDPD5-201ENST00000336898 GOLGA3Q08378 1498 aa20.34■□□□□ 0.85
GDPD5-201ENST00000336898 SYNJ1O43426 1573 aa20.33■□□□□ 0.85
GDPD5-201ENST00000336898 CLIP1P30622 1438 aa20.33■□□□□ 0.85
GDPD5-201ENST00000336898 RAPGEF2Q9Y4G8 1499 aa20.32■□□□□ 0.84
GDPD5-201ENST00000336898 ERICH6Q7L0X2 663 aa20.32■□□□□ 0.84
GDPD5-201ENST00000336898 FKBP8Q14318 412 aa20.28■□□□□ 0.84
GDPD5-201ENST00000336898 KANK4Q5T7N3 995 aaPredicted RBP20.28■□□□□ 0.84
GDPD5-201ENST00000336898 KCNH8Q96L42 1107 aa20.23■□□□□ 0.83
GDPD5-201ENST00000336898 EEA1Q15075 1411 aa20.18■□□□□ 0.82
GDPD5-201ENST00000336898 NCAPD3P42695 1498 aa20.18■□□□□ 0.82
GDPD5-201ENST00000336898 CC2D2AQ9P2K1 1620 aa20.17■□□□□ 0.82
GDPD5-201ENST00000336898 CEP164Q9UPV0 1460 aa20.16■□□□□ 0.82
GDPD5-201ENST00000336898 NESP48681 1621 aa20.15■□□□□ 0.82
GDPD5-201ENST00000336898 IRX6P78412 446 aaPredicted RBP20.14■□□□□ 0.81
GDPD5-201ENST00000336898 FAM50AQ14320 339 aaKnown RBP20.13■□□□□ 0.81
GDPD5-201ENST00000336898 NEFLP07196 543 aa20.12■□□□□ 0.81
GDPD5-201ENST00000336898 TRIM52Q96A61 297 aa20.11■□□□□ 0.81
GDPD5-201ENST00000336898 ARID3CA6NKF2 412 aa20.1■□□□□ 0.81
GDPD5-201ENST00000336898 HIRIP3Q9BW71 556 aaPredicted RBP20.1■□□□□ 0.81
GDPD5-201ENST00000336898 VPS8Q8N3P4 1428 aa20.09■□□□□ 0.81
GDPD5-201ENST00000336898 CADPSQ9ULU8 1353 aa20.06■□□□□ 0.8
GDPD5-201ENST00000336898 PEG3Q9GZU2 1588 aa20.05■□□□□ 0.8
GDPD5-201ENST00000336898 CNGB1Q14028 1251 aaPredicted RBP20.03■□□□□ 0.8
GDPD5-201ENST00000336898 KIF21BO75037 1637 aa20.02■□□□□ 0.8
GDPD5-201ENST00000336898 RBM19Q9Y4C8 960 aaKnown RBP19.98■□□□□ 0.79
GDPD5-201ENST00000336898 NBR1Q14596 966 aa19.96■□□□□ 0.79
GDPD5-201ENST00000336898 FBLN2P98095 1184 aa19.96■□□□□ 0.79
GDPD5-201ENST00000336898 DDX10Q13206 875 aaKnown RBP19.94■□□□□ 0.78
GDPD5-201ENST00000336898 CUX2O14529 1486 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 115.2 ms