RNA–Protein interactions for RNA: ENST00000336066.7

PANK2-202, Transcript of pantothenate kinase 2, humanhuman

TSL 1 (best)

Gene PANK2, Length 1,843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PANK2-202ENST00000336066 BUD13Q9BRD0 619 aaKnown RBP eCLIP26.12■■□□□ 1.775e-29■■□□□ 14.3
PANK2-202ENST00000336066 DDX3XO00571 662 aaKnown RBP eCLIP26.66■■□□□ 1.863e-28■■■□□ 18.2
PANK2-202ENST00000336066 PUM2Q8TB72 1066 aaKnown RBP eCLIP23.73■■□□□ 1.391e-18■■■□□ 16.6
PANK2-202ENST00000336066 SF3A3Q12874 501 aaKnown RBP eCLIP24.49■■□□□ 1.513e-16■□□□□ 8.4
PANK2-202ENST00000336066 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP32.14■■■□□ 2.742e-15■□□□□ 8.2
PANK2-202ENST00000336066 SRSF9Q13242 221 aaKnown RBP eCLIP16.61■□□□□ 0.251e-14■□□□□ 11.2
PANK2-202ENST00000336066 SFPQP23246 707 aaKnown RBP eCLIP27.2■■□□□ 1.959e-13■■■□□ 14.8
PANK2-202ENST00000336066 HNRNPLP14866 589 aaKnown RBP eCLIP24.85■■□□□ 1.572e-12■■□□□ 11.7
PANK2-202ENST00000336066 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP37.61■■■■□ 3.611e-11■■■■■ 127.1
PANK2-202ENST00000336066 SF3B4Q15427 424 aaKnown RBP eCLIP21.91■■□□□ 1.12e-11■■■■□ 25.5
PANK2-202ENST00000336066 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP25.72■■□□□ 1.713e-11■■■■■ 2046.7
PANK2-202ENST00000336066 ZC3H11AO75152 810 aaKnown RBP eCLIP26.86■■□□□ 1.893e-11■■■■■ 34.7
PANK2-202ENST00000336066 U2AF2P26368 475 aaKnown RBP eCLIP28.7■■■□□ 2.187e-10■■■■□ 21.2
PANK2-202ENST00000336066 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.49■■■□□ 2.951e-9■□□□□ 10.2
PANK2-202ENST00000336066 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP27.24■■□□□ 1.959e-9■■■■□ 23.2
PANK2-202ENST00000336066 RBM15Q96T37 977 aaKnown RBP eCLIP25.46■■□□□ 1.673e-8■■■■■ 27.6
PANK2-202ENST00000336066 NCBP2P52298 156 aaKnown RBP eCLIP23.47■■□□□ 1.354e-8■■□□□ 13
PANK2-202ENST00000336066 MATR3P43243 847 aaKnown RBP eCLIP27.09■■□□□ 1.934e-8■■■■■ 30.2
PANK2-202ENST00000336066 GRWD1Q9BQ67 446 aaKnown RBP eCLIP36.13■■■■□ 3.376e-8■■■■□ 19.8
PANK2-202ENST00000336066 KHSRPQ92945 711 aaKnown RBP eCLIP26.11■■□□□ 1.771e-7■■□□□ 13.9
PANK2-202ENST00000336066 PPIGQ13427 754 aaKnown RBP eCLIP26.19■■□□□ 1.781e-7■□□□□ 9.2
PANK2-202ENST00000336066 SF3B1O75533 1304 aaKnown RBP eCLIP26.21■■□□□ 1.792e-7■■■■■ 84.1
PANK2-202ENST00000336066 HNRNPMP52272 730 aaKnown RBP eCLIP36.94■■■■□ 3.52e-7■■■■■ 41.3
PANK2-202ENST00000336066 NIPBLQ6KC79 2804 aaeCLIP18.86■□□□□ 0.612e-7■■■■□ 20.4
PANK2-202ENST00000336066 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP19.98■□□□□ 0.792e-7■■□□□ 13.6
PANK2-202ENST00000336066 LIN28BQ6ZN17 250 aaKnown RBP eCLIP26.32■■□□□ 1.83e-7■■■■■ 34.7
PANK2-202ENST00000336066 RBFOX2O43251 390 aaKnown RBP eCLIP20.27■□□□□ 0.844e-7■□□□□ 10.5
PANK2-202ENST00000336066 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP21.12■□□□□ 0.975e-7■■■□□ 16.7
PANK2-202ENST00000336066 PTBP1P26599 531 aaKnown RBP eCLIP21.44■■□□□ 1.026e-7■■■□□ 17.4
PANK2-202ENST00000336066 SRSF1Q07955 248 aaKnown RBP eCLIP20.79■□□□□ 0.926e-7■□□□□ 10.4
PANK2-202ENST00000336066 PCBP2Q15366 365 aaKnown RBP eCLIP24.33■■□□□ 1.498e-7■□□□□ 9.1
PANK2-202ENST00000336066 AQRO60306 1485 aaKnown RBP eCLIP39.89■■■■□ 3.988e-7■■■■□ 19.8
PANK2-202ENST00000336066 CDC40O60508 579 aaKnown RBP eCLIP22.65■■□□□ 1.229e-7■■■□□ 18.5
PANK2-202ENST00000336066 FKBP4Q02790 459 aaKnown RBP eCLIP30.12■■■□□ 2.411e-6■□□□□ 11.3
PANK2-202ENST00000336066 ILF3Q12906 894 aaKnown RBP eCLIP24.12■■□□□ 1.451e-6■■■■□ 21.1
PANK2-202ENST00000336066 AARSP49588 968 aaKnown RBP eCLIP26.4■■□□□ 1.821e-6■■■■■ 36.1
PANK2-202ENST00000336066 ZRANB2O95218 330 aaKnown RBP eCLIP26.05■■□□□ 1.764e-6■■■□□ 16.6
PANK2-202ENST00000336066 U2AF1Q01081 240 aaKnown RBP eCLIP33■■■□□ 2.874e-6■■■■□ 20.8
PANK2-202ENST00000336066 RBM22Q9NW64 420 aaKnown RBP eCLIP25.39■■□□□ 1.654e-6■■■■□ 25.9
PANK2-202ENST00000336066 EFTUD2Q15029 972 aaKnown RBP eCLIP25.14■■□□□ 1.615e-6■□□□□ 9
PANK2-202ENST00000336066 SLTMQ9NWH9 1034 aaKnown RBP eCLIP25.9■■□□□ 1.745e-6■■■■■ 31.8
PANK2-202ENST00000336066 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.53■■■□□ 2.165e-6■□□□□ 10.2
PANK2-202ENST00000336066 GPKOWQ92917 476 aaPredicted RBP eCLIP28.64■■■□□ 2.186e-6■□□□□ 11.1
PANK2-202ENST00000336066 PABPC4Q13310 644 aaKnown RBP eCLIP28.15■■■□□ 2.17e-6■■□□□ 12
PANK2-202ENST00000336066 LARP4Q71RC2 724 aaKnown RBP eCLIP24.12■■□□□ 1.457e-6■□□□□ 9
PANK2-202ENST00000336066 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.95■■□□□ 1.919e-6■■□□□ 13.2
Retrieved 46 of 46 RNA–protein pairs in 16.5 ms