RNA–Protein interactions for RNA: ENST00000335877.10

PSMF1-203, Transcript of proteasome inhibitor subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PSMF1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMF1-203ENST00000335877 NISCHQ9Y2I1 1504 aa17.6■□□□□ 0.41
PSMF1-203ENST00000335877 DCAF8L2P0C7V8 631 aa16.85■□□□□ 0.29
PSMF1-203ENST00000335877 SUPT5HO00267 1087 aaKnown RBP16.48■□□□□ 0.23
PSMF1-203ENST00000335877 SHROOM4Q9ULL8 1493 aa16.34■□□□□ 0.21
PSMF1-203ENST00000335877 PELP1Q8IZL8 1130 aaKnown RBP16.24■□□□□ 0.19
PSMF1-203ENST00000335877 PCGF6Q9BYE7 350 aa16.22■□□□□ 0.19
PSMF1-203ENST00000335877 HRCP23327 699 aa16.03■□□□□ 0.16
PSMF1-203ENST00000335877 MYT1Q01538 1121 aa15.84■□□□□ 0.13
PSMF1-203ENST00000335877 PPARGC1BQ86YN6 1023 aaKnown RBP15.79■□□□□ 0.12
PSMF1-203ENST00000335877 ZEB1P37275 1124 aaPredicted RBP15.64■□□□□ 0.09
PSMF1-203ENST00000335877 EHMT2Q96KQ7 1210 aa15.64■□□□□ 0.09
PSMF1-203ENST00000335877 CENPBP07199 599 aaPredicted RBP15.61■□□□□ 0.09
PSMF1-203ENST00000335877 TRIM26Q12899 539 aaPredicted RBP15.42■□□□□ 0.06
PSMF1-203ENST00000335877 FAM9AQ8IZU1 332 aaPredicted RBP15.42■□□□□ 0.06
PSMF1-203ENST00000335877 CCER1Q8TC90 406 aaPredicted RBP15.34■□□□□ 0.05
PSMF1-203ENST00000335877 CHIC1Q5VXU3 224 aa15.32■□□□□ 0.04
PSMF1-203ENST00000335877 TRIM41Q8WV44 630 aa15.3■□□□□ 0.04
PSMF1-203ENST00000335877 YTHDC1Q96MU7 727 aaKnown RBP15.3■□□□□ 0.04
PSMF1-203ENST00000335877 LOC105371045A0A1W2PR82 267 aa15.27■□□□□ 0.03
PSMF1-203ENST00000335877 TTBK1Q5TCY1 1321 aaPredicted RBP15.25■□□□□ 0.03
PSMF1-203ENST00000335877 APLP2Q06481 763 aa15.16■□□□□ 0.02
PSMF1-203ENST00000335877 GTF3C3Q9Y5Q9 886 aa15.13■□□□□ 0.01
PSMF1-203ENST00000335877 SCAF1Q9H7N4 1312 aaKnown RBP15.08■□□□□ 0
PSMF1-203ENST00000335877 ACIN1Q9UKV3 1341 aaKnown RBP15.02■□□□□ -0
PSMF1-203ENST00000335877 DIEXFQ68CQ4 756 aaKnown RBP15□□□□□ -0.01
PSMF1-203ENST00000335877 ERICH6Q7L0X2 663 aa14.98□□□□□ -0.01
PSMF1-203ENST00000335877 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.93□□□□□ -0.02
PSMF1-203ENST00000335877 UBTFP17480 764 aaKnown RBP14.91□□□□□ -0.02
PSMF1-203ENST00000335877 NEUROD1Q13562 356 aa14.84□□□□□ -0.03
PSMF1-203ENST00000335877 RANGAP1P46060 587 aaPredicted RBP14.83□□□□□ -0.03
PSMF1-203ENST00000335877 CCDC180Q9P1Z9 1646 aa14.81□□□□□ -0.04
PSMF1-203ENST00000335877 NEFLP07196 543 aa14.78□□□□□ -0.04
PSMF1-203ENST00000335877 DCAF1Q9Y4B6 1507 aa14.71□□□□□ -0.05
PSMF1-203ENST00000335877 ZCCHC6Q5VYS8 1495 aaKnown RBP14.69□□□□□ -0.06
PSMF1-203ENST00000335877 MYO15BQ96JP2 1530 aa14.69□□□□□ -0.06
PSMF1-203ENST00000335877 ZNF316A6NFI3 1004 aaPredicted RBP14.57□□□□□ -0.08
PSMF1-203ENST00000335877 HNRNPUL2Q1KMD3 747 aaKnown RBP14.57□□□□□ -0.08
PSMF1-203ENST00000335877 ATP1B4Q9UN42 357 aaPredicted RBP14.56□□□□□ -0.08
PSMF1-203ENST00000335877 ABCC9O60706 1549 aa14.54□□□□□ -0.08
PSMF1-203ENST00000335877 BCANQ96GW7 911 aa14.54□□□□□ -0.08
PSMF1-203ENST00000335877 ITGAEP38570 1179 aa14.34□□□□□ -0.11
PSMF1-203ENST00000335877 PABPN1Q86U42 306 aaKnown RBP eCLIP14.33□□□□□ -0.12
PSMF1-203ENST00000335877 MIER1Q8N108 512 aa14.32□□□□□ -0.12
PSMF1-203ENST00000335877 ANP32EQ9BTT0 268 aa14.31□□□□□ -0.12
PSMF1-203ENST00000335877 BCL11AQ9H165 835 aa14.3□□□□□ -0.12
PSMF1-203ENST00000335877 SCRIBQ14160 1630 aa14.28□□□□□ -0.12
PSMF1-203ENST00000335877 CLSPNQ9HAW4 1339 aa14.27□□□□□ -0.12
PSMF1-203ENST00000335877 RTL5Q5HYW3 569 aaPredicted RBP14.26□□□□□ -0.13
PSMF1-203ENST00000335877 CSRNP3Q8WYN3 585 aa14.23□□□□□ -0.13
PSMF1-203ENST00000335877 FKBP8Q14318 412 aa14.21□□□□□ -0.13
PSMF1-203ENST00000335877 CDK11AQ9UQ88 783 aaPredicted RBP14.19□□□□□ -0.14
PSMF1-203ENST00000335877 RSF1Q96T23 1441 aaPredicted RBP14.12□□□□□ -0.15
PSMF1-203ENST00000335877 SUPT16HQ9Y5B9 1047 aaKnown RBP14.07□□□□□ -0.16
PSMF1-203ENST00000335877 FAM50AQ14320 339 aaKnown RBP14.05□□□□□ -0.16
PSMF1-203ENST00000335877 DAXXQ9UER7 740 aaPredicted RBP14.05□□□□□ -0.16
PSMF1-203ENST00000335877 ANP32CO43423 234 aa14.04□□□□□ -0.16
PSMF1-203ENST00000335877 CNGB1Q14028 1251 aaPredicted RBP14.01□□□□□ -0.17
PSMF1-203ENST00000335877 NACADO15069 1562 aa14.01□□□□□ -0.17
PSMF1-203ENST00000335877 MYT1LQ9UL68 1186 aa13.98□□□□□ -0.17
PSMF1-203ENST00000335877 NBR1Q14596 966 aa13.97□□□□□ -0.17
PSMF1-203ENST00000335877 EIF5BO60841 1220 aaKnown RBP13.95□□□□□ -0.18
PSMF1-203ENST00000335877 TRIM52Q96A61 297 aa13.95□□□□□ -0.18
PSMF1-203ENST00000335877 RB1CC1Q8TDY2 1594 aa13.95□□□□□ -0.18
PSMF1-203ENST00000335877 TSHZ2Q9NRE2 1034 aa13.94□□□□□ -0.18
PSMF1-203ENST00000335877 POLR3GLQ9BT43 218 aa13.93□□□□□ -0.18
PSMF1-203ENST00000335877 DDX10Q13206 875 aaKnown RBP13.92□□□□□ -0.18
PSMF1-203ENST00000335877 ANP32AP39687 249 aaKnown RBP13.9□□□□□ -0.18
PSMF1-203ENST00000335877 IRX6P78412 446 aaPredicted RBP13.86□□□□□ -0.19
PSMF1-203ENST00000335877 EEA1Q15075 1411 aa13.84□□□□□ -0.19
PSMF1-203ENST00000335877 HNRNPUQ00839 825 aaKnown RBP eCLIP13.84□□□□□ -0.19
PSMF1-203ENST00000335877 RBM19Q9Y4C8 960 aaKnown RBP13.84□□□□□ -0.19
PSMF1-203ENST00000335877 P3H3Q8IVL6 736 aa13.83□□□□□ -0.2
PSMF1-203ENST00000335877 CEP162Q5TB80 1403 aa13.82□□□□□ -0.2
PSMF1-203ENST00000335877 NPM2Q86SE8 214 aaKnown RBP13.81□□□□□ -0.2
PSMF1-203ENST00000335877 CLIP1P30622 1438 aa13.8□□□□□ -0.2
PSMF1-203ENST00000335877 CECR2Q9BXF3 1484 aa13.79□□□□□ -0.2
PSMF1-203ENST00000335877 GOLGA3Q08378 1498 aa13.76□□□□□ -0.21
PSMF1-203ENST00000335877 TNIKQ9UKE5 1360 aa13.76□□□□□ -0.21
PSMF1-203ENST00000335877 ZBTB47Q9UFB7 747 aaPredicted RBP13.75□□□□□ -0.21
PSMF1-203ENST00000335877 DEKP35659 375 aaKnown RBP13.74□□□□□ -0.21
PSMF1-203ENST00000335877 BAZ1AQ9NRL2 1556 aaPredicted RBP13.73□□□□□ -0.21
PSMF1-203ENST00000335877 WRNQ14191 1432 aaPredicted RBP eCLIP13.73□□□□□ -0.21
PSMF1-203ENST00000335877 RTN4Q9NQC3 1192 aaKnown RBP13.73□□□□□ -0.21
PSMF1-203ENST00000335877 HIRIP3Q9BW71 556 aaPredicted RBP13.72□□□□□ -0.21
PSMF1-203ENST00000335877 FAM9BQ8IZU0 186 aa13.66□□□□□ -0.22
PSMF1-203ENST00000335877 MROH2BQ7Z745 1585 aa13.65□□□□□ -0.22
PSMF1-203ENST00000335877 CCDC136Q96JN2 1154 aa13.65□□□□□ -0.22
PSMF1-203ENST00000335877 CEP164Q9UPV0 1460 aa13.65□□□□□ -0.23
PSMF1-203ENST00000335877 ZNF326Q5BKZ1 582 aaKnown RBP13.63□□□□□ -0.23
PSMF1-203ENST00000335877 TONSLQ96HA7 1378 aa13.63□□□□□ -0.23
PSMF1-203ENST00000335877 NOP58Q9Y2X3 529 aaKnown RBP13.61□□□□□ -0.23
PSMF1-203ENST00000335877 ARID3CA6NKF2 412 aa13.6□□□□□ -0.23
PSMF1-203ENST00000335877 BAZ1BQ9UIG0 1483 aaKnown RBP13.6□□□□□ -0.23
PSMF1-203ENST00000335877 GLIPR1L2Q4G1C9 344 aa13.59□□□□□ -0.23
PSMF1-203ENST00000335877 SOGA1O94964 1423 aa13.59□□□□□ -0.23
PSMF1-203ENST00000335877 FBLN2P98095 1184 aa13.56□□□□□ -0.24
PSMF1-203ENST00000335877 PPP4R2Q9NY27 417 aa13.54□□□□□ -0.24
PSMF1-203ENST00000335877 B4GALNT3Q6L9W6 998 aa13.53□□□□□ -0.24
PSMF1-203ENST00000335877 CCDC88BA6NC98 1476 aa13.53□□□□□ -0.24
PSMF1-203ENST00000335877 KIF27Q86VH2 1401 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms