RNA–Protein interactions for RNA: ENST00000335757.9

SLC44A2-201, Transcript of solute carrier family 44 member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC44A2, Length 3,671 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A2-201ENST00000335757 NISCHQ9Y2I1 1504 aa32.08■■■□□ 2.73
SLC44A2-201ENST00000335757 CCDC180Q9P1Z9 1646 aa28.06■■■□□ 2.08
SLC44A2-201ENST00000335757 ZCCHC6Q5VYS8 1495 aaKnown RBP27.07■■□□□ 1.92
SLC44A2-201ENST00000335757 DCAF1Q9Y4B6 1507 aa26.64■■□□□ 1.86
SLC44A2-201ENST00000335757 MYO15BQ96JP2 1530 aa26.24■■□□□ 1.79
SLC44A2-201ENST00000335757 ABCC9O60706 1549 aa25.93■■□□□ 1.74
SLC44A2-201ENST00000335757 SHROOM4Q9ULL8 1493 aa25.88■■□□□ 1.73
SLC44A2-201ENST00000335757 NACADO15069 1562 aa25.87■■□□□ 1.73
SLC44A2-201ENST00000335757 SCRIBQ14160 1630 aa25.62■■□□□ 1.69
SLC44A2-201ENST00000335757 UNC13AQ9UPW8 1703 aa25.61■■□□□ 1.69
SLC44A2-201ENST00000335757 DCAF8L2P0C7V8 631 aa25.58■■□□□ 1.69
SLC44A2-201ENST00000335757 RB1CC1Q8TDY2 1594 aa25.53■■□□□ 1.68
SLC44A2-201ENST00000335757 HRCP23327 699 aa25.23■■□□□ 1.63
SLC44A2-201ENST00000335757 SUPT5HO00267 1087 aaKnown RBP25.22■■□□□ 1.63
SLC44A2-201ENST00000335757 BICRAQ9NZM4 1560 aa25.14■■□□□ 1.61
SLC44A2-201ENST00000335757 CECR2Q9BXF3 1484 aa24.92■■□□□ 1.58
SLC44A2-201ENST00000335757 RSF1Q96T23 1441 aaPredicted RBP24.91■■□□□ 1.58
SLC44A2-201ENST00000335757 CHIC1Q5VXU3 224 aa24.84■■□□□ 1.57
SLC44A2-201ENST00000335757 MROH2BQ7Z745 1585 aa24.84■■□□□ 1.57
SLC44A2-201ENST00000335757 PCGF6Q9BYE7 350 aa24.77■■□□□ 1.56
SLC44A2-201ENST00000335757 WIZO95785 1651 aa24.72■■□□□ 1.55
SLC44A2-201ENST00000335757 SMARCA4P51532 1647 aa24.7■■□□□ 1.54
SLC44A2-201ENST00000335757 PPARGC1BQ86YN6 1023 aaKnown RBP24.68■■□□□ 1.54
SLC44A2-201ENST00000335757 BAZ1AQ9NRL2 1556 aaPredicted RBP24.66■■□□□ 1.54
SLC44A2-201ENST00000335757 PEG3Q9GZU2 1588 aa24.52■■□□□ 1.52
SLC44A2-201ENST00000335757 EIF4G1Q04637 1599 aaKnown RBP24.43■■□□□ 1.5
SLC44A2-201ENST00000335757 TOP2AP11388 1531 aaKnown RBP24.36■■□□□ 1.49
SLC44A2-201ENST00000335757 PABPN1Q86U42 306 aaKnown RBP eCLIP24.34■■□□□ 1.49
SLC44A2-201ENST00000335757 SMARCA2P51531 1590 aa24.24■■□□□ 1.47
SLC44A2-201ENST00000335757 LOC105371045A0A1W2PR82 267 aa24.2■■□□□ 1.46
SLC44A2-201ENST00000335757 ATAD2BQ9ULI0 1458 aa24.11■■□□□ 1.45
SLC44A2-201ENST00000335757 TRIM26Q12899 539 aaPredicted RBP24.08■■□□□ 1.44
SLC44A2-201ENST00000335757 CCDC88BA6NC98 1476 aa24.06■■□□□ 1.44
SLC44A2-201ENST00000335757 HMGXB3Q12766 1538 aa23.94■■□□□ 1.42
SLC44A2-201ENST00000335757 PELP1Q8IZL8 1130 aaKnown RBP23.89■■□□□ 1.42
SLC44A2-201ENST00000335757 NCAPD3P42695 1498 aa23.86■■□□□ 1.41
SLC44A2-201ENST00000335757 BAZ1BQ9UIG0 1483 aaKnown RBP23.81■■□□□ 1.4
SLC44A2-201ENST00000335757 ZEB1P37275 1124 aaPredicted RBP23.78■■□□□ 1.4
SLC44A2-201ENST00000335757 CC2D2AQ9P2K1 1620 aa23.73■■□□□ 1.39
SLC44A2-201ENST00000335757 SCAF1Q9H7N4 1312 aaKnown RBP23.73■■□□□ 1.39
SLC44A2-201ENST00000335757 PRDM2Q13029 1718 aa23.67■■□□□ 1.38
SLC44A2-201ENST00000335757 ABCC8Q09428 1581 aa23.66■■□□□ 1.38
SLC44A2-201ENST00000335757 SYNJ1O43426 1573 aa23.49■■□□□ 1.35
SLC44A2-201ENST00000335757 BIVM-ERCC5R4GMW8 1640 aa23.43■■□□□ 1.34
SLC44A2-201ENST00000335757 CFTRP13569 1480 aa23.41■■□□□ 1.34
SLC44A2-201ENST00000335757 TRIM41Q8WV44 630 aa23.38■■□□□ 1.33
SLC44A2-201ENST00000335757 TOP2BQ02880 1626 aa23.34■■□□□ 1.33
SLC44A2-201ENST00000335757 FAM9AQ8IZU1 332 aaPredicted RBP23.3■■□□□ 1.32
SLC44A2-201ENST00000335757 WRNQ14191 1432 aaPredicted RBP eCLIP23.25■■□□□ 1.31
SLC44A2-201ENST00000335757 CUX1P39880 1505 aa23.22■■□□□ 1.31
SLC44A2-201ENST00000335757 ACIN1Q9UKV3 1341 aaKnown RBP23.21■■□□□ 1.31
SLC44A2-201ENST00000335757 RUSC2Q8N2Y8 1516 aa23.18■■□□□ 1.3
SLC44A2-201ENST00000335757 NEUROD1Q13562 356 aa23.16■■□□□ 1.3
SLC44A2-201ENST00000335757 SOGA1O94964 1423 aa23.15■■□□□ 1.3
SLC44A2-201ENST00000335757 EHMT2Q96KQ7 1210 aa23.14■■□□□ 1.3
SLC44A2-201ENST00000335757 CADPSQ9ULU8 1353 aa23.1■■□□□ 1.29
SLC44A2-201ENST00000335757 DNAJC5BQ9UF47 199 aa23.06■■□□□ 1.28
SLC44A2-201ENST00000335757 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.05■■□□□ 1.28
SLC44A2-201ENST00000335757 LAMC3Q9Y6N6 1575 aa23.04■■□□□ 1.28
SLC44A2-201ENST00000335757 NESP48681 1621 aa23.02■■□□□ 1.28
SLC44A2-201ENST00000335757 KIF21BO75037 1637 aa22.99■■□□□ 1.27
SLC44A2-201ENST00000335757 CCER1Q8TC90 406 aaPredicted RBP22.97■■□□□ 1.27
SLC44A2-201ENST00000335757 GTF3C3Q9Y5Q9 886 aa22.97■■□□□ 1.27
SLC44A2-201ENST00000335757 KIF21AQ7Z4S6 1674 aa22.97■■□□□ 1.27
SLC44A2-201ENST00000335757 EEA1Q15075 1411 aa22.96■■□□□ 1.27
SLC44A2-201ENST00000335757 WDR97A6NE52 1622 aa22.93■■□□□ 1.26
SLC44A2-201ENST00000335757 DIEXFQ68CQ4 756 aaKnown RBP22.92■■□□□ 1.26
SLC44A2-201ENST00000335757 FANCD2Q9BXW9 1451 aa22.9■■□□□ 1.26
SLC44A2-201ENST00000335757 CENPBP07199 599 aaPredicted RBP22.87■■□□□ 1.25
SLC44A2-201ENST00000335757 DNMBPQ6XZF7 1577 aa22.87■■□□□ 1.25
SLC44A2-201ENST00000335757 MYT1Q01538 1121 aa22.86■■□□□ 1.25
SLC44A2-201ENST00000335757 URB2Q14146 1524 aaKnown RBP22.79■■□□□ 1.24
SLC44A2-201ENST00000335757 TOPBP1Q92547 1522 aa22.78■■□□□ 1.24
SLC44A2-201ENST00000335757 FGD5Q6ZNL6 1462 aa22.77■■□□□ 1.24
SLC44A2-201ENST00000335757 PRXQ9BXM0 1461 aa22.76■■□□□ 1.23
SLC44A2-201ENST00000335757 ERICH3Q5RHP9 1530 aa22.72■■□□□ 1.23
SLC44A2-201ENST00000335757 CSRNP3Q8WYN3 585 aa22.7■■□□□ 1.22
SLC44A2-201ENST00000335757 GOLGA3Q08378 1498 aa22.69■■□□□ 1.22
SLC44A2-201ENST00000335757 TNIKQ9UKE5 1360 aa22.69■■□□□ 1.22
SLC44A2-201ENST00000335757 RAPGEF2Q9Y4G8 1499 aa22.68■■□□□ 1.22
SLC44A2-201ENST00000335757 CEP164Q9UPV0 1460 aa22.68■■□□□ 1.22
SLC44A2-201ENST00000335757 POLA1P09884 1462 aaPredicted RBP22.68■■□□□ 1.22
SLC44A2-201ENST00000335757 TARBP1Q13395 1621 aaKnown RBP22.66■■□□□ 1.22
SLC44A2-201ENST00000335757 ABCA10Q8WWZ4 1543 aa22.65■■□□□ 1.22
SLC44A2-201ENST00000335757 ABCA5Q8WWZ7 1642 aa22.64■■□□□ 1.22
SLC44A2-201ENST00000335757 CEP162Q5TB80 1403 aa22.58■■□□□ 1.21
SLC44A2-201ENST00000335757 TTBK1Q5TCY1 1321 aaPredicted RBP22.56■■□□□ 1.2
SLC44A2-201ENST00000335757 RAD54L2Q9Y4B4 1467 aa22.56■■□□□ 1.2
SLC44A2-201ENST00000335757 ZNF316A6NFI3 1004 aaPredicted RBP22.56■■□□□ 1.2
SLC44A2-201ENST00000335757 KIF27Q86VH2 1401 aa22.55■■□□□ 1.2
SLC44A2-201ENST00000335757 PDS5BQ9NTI5 1447 aa22.55■■□□□ 1.2
SLC44A2-201ENST00000335757 THOC2Q8NI27 1593 aaKnown RBP22.54■■□□□ 1.2
SLC44A2-201ENST00000335757 WDR62O43379 1518 aa22.52■■□□□ 1.2
SLC44A2-201ENST00000335757 IGF1RP08069 1367 aa22.51■■□□□ 1.19
SLC44A2-201ENST00000335757 CUX2O14529 1486 aa22.5■■□□□ 1.19
SLC44A2-201ENST00000335757 CUL7Q14999 1698 aa22.46■■□□□ 1.19
SLC44A2-201ENST00000335757 YTHDC1Q96MU7 727 aaKnown RBP22.45■■□□□ 1.19
SLC44A2-201ENST00000335757 PBRM1Q86U86 1689 aa22.45■■□□□ 1.18
SLC44A2-201ENST00000335757 MRC2Q9UBG0 1479 aa22.43■■□□□ 1.18
SLC44A2-201ENST00000335757 MIER1Q8N108 512 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms