RNA–Protein interactions for RNA: ENST00000335503.3

CCT6A-202, Transcript of chaperonin containing TCP1 subunit 6A, humanhuman

TSL 5 BASIC

Gene CCT6A, Length 2,529 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT6A-202ENST00000335503 NISCHQ9Y2I1 1504 aa38.19■■■■□ 3.7
CCT6A-202ENST00000335503 CCDC180Q9P1Z9 1646 aa33.44■■■□□ 2.94
CCT6A-202ENST00000335503 ZCCHC6Q5VYS8 1495 aaKnown RBP32.08■■■□□ 2.73
CCT6A-202ENST00000335503 ABCC9O60706 1549 aa31.6■■■□□ 2.65
CCT6A-202ENST00000335503 DCAF1Q9Y4B6 1507 aa31.6■■■□□ 2.65
CCT6A-202ENST00000335503 DCAF8L2P0C7V8 631 aa31.47■■■□□ 2.63
CCT6A-202ENST00000335503 MYO15BQ96JP2 1530 aa31.25■■■□□ 2.59
CCT6A-202ENST00000335503 NACADO15069 1562 aa31.1■■■□□ 2.57
CCT6A-202ENST00000335503 SHROOM4Q9ULL8 1493 aa31.04■■■□□ 2.56
CCT6A-202ENST00000335503 RB1CC1Q8TDY2 1594 aa30.87■■■□□ 2.53
CCT6A-202ENST00000335503 SCRIBQ14160 1630 aa30.69■■■□□ 2.5
CCT6A-202ENST00000335503 UNC13AQ9UPW8 1703 aa30.32■■■□□ 2.44
CCT6A-202ENST00000335503 BICRAQ9NZM4 1560 aa29.93■■■□□ 2.38
CCT6A-202ENST00000335503 SUPT5HO00267 1087 aaKnown RBP29.8■■■□□ 2.36
CCT6A-202ENST00000335503 PABPN1Q86U42 306 aaKnown RBP eCLIP29.72■■■□□ 2.35
CCT6A-202ENST00000335503 CECR2Q9BXF3 1484 aa29.65■■■□□ 2.34
CCT6A-202ENST00000335503 RSF1Q96T23 1441 aaPredicted RBP29.56■■■□□ 2.32
CCT6A-202ENST00000335503 BAZ1AQ9NRL2 1556 aaPredicted RBP29.52■■■□□ 2.32
CCT6A-202ENST00000335503 MROH2BQ7Z745 1585 aa29.5■■■□□ 2.31
CCT6A-202ENST00000335503 SMARCA4P51532 1647 aa29.42■■■□□ 2.3
CCT6A-202ENST00000335503 WIZO95785 1651 aa29.29■■■□□ 2.28
CCT6A-202ENST00000335503 PEG3Q9GZU2 1588 aa29.06■■■□□ 2.24
CCT6A-202ENST00000335503 EIF4G1Q04637 1599 aaKnown RBP29.03■■■□□ 2.24
CCT6A-202ENST00000335503 TOP2AP11388 1531 aaKnown RBP28.98■■■□□ 2.23
CCT6A-202ENST00000335503 SMARCA2P51531 1590 aa28.92■■■□□ 2.22
CCT6A-202ENST00000335503 ATAD2BQ9ULI0 1458 aa28.9■■■□□ 2.22
CCT6A-202ENST00000335503 BAZ1BQ9UIG0 1483 aaKnown RBP28.76■■■□□ 2.19
CCT6A-202ENST00000335503 HMGXB3Q12766 1538 aa28.67■■■□□ 2.18
CCT6A-202ENST00000335503 NCAPD3P42695 1498 aa28.66■■■□□ 2.18
CCT6A-202ENST00000335503 CCDC88BA6NC98 1476 aa28.63■■■□□ 2.17
CCT6A-202ENST00000335503 CC2D2AQ9P2K1 1620 aa28.63■■■□□ 2.17
CCT6A-202ENST00000335503 CHIC1Q5VXU3 224 aa28.47■■■□□ 2.15
CCT6A-202ENST00000335503 ABCC8Q09428 1581 aa28.04■■■□□ 2.08
CCT6A-202ENST00000335503 TRIM41Q8WV44 630 aa28.03■■■□□ 2.08
CCT6A-202ENST00000335503 PRDM2Q13029 1718 aa28.02■■■□□ 2.08
CCT6A-202ENST00000335503 CFTRP13569 1480 aa28.01■■■□□ 2.07
CCT6A-202ENST00000335503 CADPSQ9ULU8 1353 aa27.9■■■□□ 2.06
CCT6A-202ENST00000335503 DNAJC5BQ9UF47 199 aa27.85■■■□□ 2.05
CCT6A-202ENST00000335503 WRNQ14191 1432 aaPredicted RBP eCLIP27.84■■■□□ 2.05
CCT6A-202ENST00000335503 SYNJ1O43426 1573 aa27.78■■■□□ 2.04
CCT6A-202ENST00000335503 LAMC3Q9Y6N6 1575 aa27.76■■■□□ 2.03
CCT6A-202ENST00000335503 NESP48681 1621 aa27.71■■■□□ 2.03
CCT6A-202ENST00000335503 BIVM-ERCC5R4GMW8 1640 aa27.68■■■□□ 2.02
CCT6A-202ENST00000335503 TOP2BQ02880 1626 aa27.68■■■□□ 2.02
CCT6A-202ENST00000335503 FANCD2Q9BXW9 1451 aa27.63■■■□□ 2.01
CCT6A-202ENST00000335503 CUX1P39880 1505 aa27.6■■■□□ 2.01
CCT6A-202ENST00000335503 FAM9AQ8IZU1 332 aaPredicted RBP27.5■■□□□ 1.99
CCT6A-202ENST00000335503 PDS5BQ9NTI5 1447 aa27.49■■□□□ 1.99
CCT6A-202ENST00000335503 CEP164Q9UPV0 1460 aa27.48■■□□□ 1.99
CCT6A-202ENST00000335503 KIF21AQ7Z4S6 1674 aa27.47■■□□□ 1.99
CCT6A-202ENST00000335503 SOGA1O94964 1423 aa27.45■■□□□ 1.98
CCT6A-202ENST00000335503 EEA1Q15075 1411 aa27.41■■□□□ 1.98
CCT6A-202ENST00000335503 DNMBPQ6XZF7 1577 aa27.41■■□□□ 1.98
CCT6A-202ENST00000335503 LOC105371045A0A1W2PR82 267 aa27.36■■□□□ 1.97
CCT6A-202ENST00000335503 RUSC2Q8N2Y8 1516 aa27.35■■□□□ 1.97
CCT6A-202ENST00000335503 TOPBP1Q92547 1522 aa27.33■■□□□ 1.97
CCT6A-202ENST00000335503 FGD5Q6ZNL6 1462 aa27.31■■□□□ 1.96
CCT6A-202ENST00000335503 URB2Q14146 1524 aaKnown RBP27.29■■□□□ 1.96
CCT6A-202ENST00000335503 CSRNP3Q8WYN3 585 aa27.2■■□□□ 1.95
CCT6A-202ENST00000335503 POLA1P09884 1462 aaPredicted RBP27.18■■□□□ 1.94
CCT6A-202ENST00000335503 MRC2Q9UBG0 1479 aa27.18■■□□□ 1.94
CCT6A-202ENST00000335503 KIF27Q86VH2 1401 aa27.15■■□□□ 1.94
CCT6A-202ENST00000335503 EHMT2Q96KQ7 1210 aa27.12■■□□□ 1.93
CCT6A-202ENST00000335503 ERCC6Q03468 1493 aa27.11■■□□□ 1.93
CCT6A-202ENST00000335503 KIF21BO75037 1637 aa27.11■■□□□ 1.93
CCT6A-202ENST00000335503 CUX2O14529 1486 aa27.1■■□□□ 1.93
CCT6A-202ENST00000335503 RAD54L2Q9Y4B4 1467 aa27.08■■□□□ 1.92
CCT6A-202ENST00000335503 WDR97A6NE52 1622 aa27.07■■□□□ 1.92
CCT6A-202ENST00000335503 ABCA10Q8WWZ4 1543 aa27.07■■□□□ 1.92
CCT6A-202ENST00000335503 WDR62O43379 1518 aa27.05■■□□□ 1.92
CCT6A-202ENST00000335503 GOLGA3Q08378 1498 aa27.04■■□□□ 1.92
CCT6A-202ENST00000335503 THOC2Q8NI27 1593 aaKnown RBP27.02■■□□□ 1.92
CCT6A-202ENST00000335503 TARBP1Q13395 1621 aaKnown RBP26.96■■□□□ 1.91
CCT6A-202ENST00000335503 PRXQ9BXM0 1461 aa26.94■■□□□ 1.9
CCT6A-202ENST00000335503 ERICH3Q5RHP9 1530 aa26.93■■□□□ 1.9
CCT6A-202ENST00000335503 RAPGEF2Q9Y4G8 1499 aa26.91■■□□□ 1.9
CCT6A-202ENST00000335503 ABCA5Q8WWZ7 1642 aa26.9■■□□□ 1.9
CCT6A-202ENST00000335503 TNIKQ9UKE5 1360 aa26.89■■□□□ 1.9
CCT6A-202ENST00000335503 IGF1RP08069 1367 aa26.87■■□□□ 1.89
CCT6A-202ENST00000335503 UBTFP17480 764 aaKnown RBP26.85■■□□□ 1.89
CCT6A-202ENST00000335503 IFT140Q96RY7 1462 aa26.82■■□□□ 1.88
CCT6A-202ENST00000335503 CUL7Q14999 1698 aa26.8■■□□□ 1.88
CCT6A-202ENST00000335503 TDRD9Q8NDG6 1382 aaKnown RBP26.8■■□□□ 1.88
CCT6A-202ENST00000335503 GAPVD1Q14C86 1478 aa26.79■■□□□ 1.88
CCT6A-202ENST00000335503 CEP162Q5TB80 1403 aa26.77■■□□□ 1.88
CCT6A-202ENST00000335503 CARMIL1Q5VZK9 1371 aa26.75■■□□□ 1.87
CCT6A-202ENST00000335503 PBRM1Q86U86 1689 aa26.75■■□□□ 1.87
CCT6A-202ENST00000335503 ZNF608Q9ULD9 1512 aaPredicted RBP26.66■■□□□ 1.86
CCT6A-202ENST00000335503 AQRO60306 1485 aaKnown RBP eCLIP26.65■■□□□ 1.861e-7■■■■■ 51.5
CCT6A-202ENST00000335503 EIF4G3O43432 1585 aaKnown RBP26.64■■□□□ 1.86
CCT6A-202ENST00000335503 GRIN2BQ13224 1484 aa26.6■■□□□ 1.85
CCT6A-202ENST00000335503 CLIP1P30622 1438 aa26.58■■□□□ 1.85
CCT6A-202ENST00000335503 ADAMTS12P58397 1594 aa26.55■■□□□ 1.84
CCT6A-202ENST00000335503 CTTNBP2Q8WZ74 1663 aa26.53■■□□□ 1.84
CCT6A-202ENST00000335503 FHAD1B1AJZ9 1412 aa26.5■■□□□ 1.83
CCT6A-202ENST00000335503 HRCP23327 699 aa26.45■■□□□ 1.83
CCT6A-202ENST00000335503 SNAPC4Q5SXM2 1469 aa26.44■■□□□ 1.82
CCT6A-202ENST00000335503 RANGAP1P46060 587 aaPredicted RBP26.43■■□□□ 1.82
CCT6A-202ENST00000335503 MAGI1Q96QZ7 1491 aaPredicted RBP26.4■■□□□ 1.82
CCT6A-202ENST00000335503 ARHGAP35Q9NRY4 1499 aa26.35■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms