RNA–Protein interactions for RNA: ENST00000335080.5

KDM4D-201, Transcript of lysine demethylase 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM4D, Length 2,978 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4D-201ENST00000335080 NISCHQ9Y2I1 1504 aa21.04■□□□□ 0.96
KDM4D-201ENST00000335080 CCDC180Q9P1Z9 1646 aa18.49■□□□□ 0.55
KDM4D-201ENST00000335080 ZCCHC6Q5VYS8 1495 aaKnown RBP17.63■□□□□ 0.41
KDM4D-201ENST00000335080 ABCC9O60706 1549 aa17.62■□□□□ 0.41
KDM4D-201ENST00000335080 DCAF1Q9Y4B6 1507 aa17.42■□□□□ 0.38
KDM4D-201ENST00000335080 DCAF8L2P0C7V8 631 aa17.41■□□□□ 0.38
KDM4D-201ENST00000335080 DNAJC5Q9H3Z4 198 aa17.37■□□□□ 0.37
KDM4D-201ENST00000335080 HRCP23327 699 aa17.31■□□□□ 0.36
KDM4D-201ENST00000335080 MYO15BQ96JP2 1530 aa17.3■□□□□ 0.36
KDM4D-201ENST00000335080 NACADO15069 1562 aa17.26■□□□□ 0.35
KDM4D-201ENST00000335080 RB1CC1Q8TDY2 1594 aa17.17■□□□□ 0.34
KDM4D-201ENST00000335080 SHROOM4Q9ULL8 1493 aa17.07■□□□□ 0.32
KDM4D-201ENST00000335080 PPARGC1BQ86YN6 1023 aaKnown RBP17.05■□□□□ 0.32
KDM4D-201ENST00000335080 SUPT5HO00267 1087 aaKnown RBP17.01■□□□□ 0.31
KDM4D-201ENST00000335080 AEBP2Q6ZN18 517 aaPredicted RBP17■□□□□ 0.31
KDM4D-201ENST00000335080 PCGF6Q9BYE7 350 aa16.98■□□□□ 0.31
KDM4D-201ENST00000335080 SCRIBQ14160 1630 aa16.93■□□□□ 0.3
KDM4D-201ENST00000335080 UNC13AQ9UPW8 1703 aa16.81■□□□□ 0.28
KDM4D-201ENST00000335080 PELP1Q8IZL8 1130 aaKnown RBP16.73■□□□□ 0.27
KDM4D-201ENST00000335080 CHIC1Q5VXU3 224 aa16.7■□□□□ 0.26
KDM4D-201ENST00000335080 BICRAQ9NZM4 1560 aa16.62■□□□□ 0.25
KDM4D-201ENST00000335080 PABPN1Q86U42 306 aaKnown RBP eCLIP16.55■□□□□ 0.24
KDM4D-201ENST00000335080 SCAF1Q9H7N4 1312 aaKnown RBP16.46■□□□□ 0.23
KDM4D-201ENST00000335080 LOC105371045A0A1W2PR82 267 aa16.39■□□□□ 0.21
KDM4D-201ENST00000335080 TRIM26Q12899 539 aaPredicted RBP16.35■□□□□ 0.21
KDM4D-201ENST00000335080 CECR2Q9BXF3 1484 aa16.34■□□□□ 0.21
KDM4D-201ENST00000335080 BAZ1AQ9NRL2 1556 aaPredicted RBP16.27■□□□□ 0.2
KDM4D-201ENST00000335080 MROH2BQ7Z745 1585 aa16.23■□□□□ 0.19
KDM4D-201ENST00000335080 SMARCA4P51532 1647 aa16.23■□□□□ 0.19
KDM4D-201ENST00000335080 RSF1Q96T23 1441 aaPredicted RBP16.22■□□□□ 0.19
KDM4D-201ENST00000335080 ZEB1P37275 1124 aaPredicted RBP16.2■□□□□ 0.18
KDM4D-201ENST00000335080 DNAJC5BQ9UF47 199 aa16.16■□□□□ 0.18
KDM4D-201ENST00000335080 EIF4G1Q04637 1599 aaKnown RBP16.15■□□□□ 0.18
KDM4D-201ENST00000335080 WIZO95785 1651 aa16.1■□□□□ 0.17
KDM4D-201ENST00000335080 MYT1Q01538 1121 aa16.06■□□□□ 0.16
KDM4D-201ENST00000335080 PEG3Q9GZU2 1588 aa16.04■□□□□ 0.16
KDM4D-201ENST00000335080 SMARCA2P51531 1590 aa16.01■□□□□ 0.15
KDM4D-201ENST00000335080 ACIN1Q9UKV3 1341 aaKnown RBP16■□□□□ 0.15
KDM4D-201ENST00000335080 ATAD2BQ9ULI0 1458 aa16■□□□□ 0.15
KDM4D-201ENST00000335080 NEUROD1Q13562 356 aa15.99■□□□□ 0.15
KDM4D-201ENST00000335080 CC2D2AQ9P2K1 1620 aa15.97■□□□□ 0.15
KDM4D-201ENST00000335080 TOP2AP11388 1531 aaKnown RBP15.94■□□□□ 0.14
KDM4D-201ENST00000335080 GTF3C3Q9Y5Q9 886 aa15.91■□□□□ 0.14
KDM4D-201ENST00000335080 NCAPD3P42695 1498 aa15.91■□□□□ 0.14
KDM4D-201ENST00000335080 BAZ1BQ9UIG0 1483 aaKnown RBP15.91■□□□□ 0.14
KDM4D-201ENST00000335080 HMGXB3Q12766 1538 aa15.88■□□□□ 0.13
KDM4D-201ENST00000335080 EHMT2Q96KQ7 1210 aa15.77■□□□□ 0.12
KDM4D-201ENST00000335080 CENPBP07199 599 aaPredicted RBP15.77■□□□□ 0.11
KDM4D-201ENST00000335080 FAM9AQ8IZU1 332 aaPredicted RBP15.76■□□□□ 0.11
KDM4D-201ENST00000335080 CCDC88BA6NC98 1476 aa15.75■□□□□ 0.11
KDM4D-201ENST00000335080 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.72■□□□□ 0.11
KDM4D-201ENST00000335080 DIEXFQ68CQ4 756 aaKnown RBP15.7■□□□□ 0.1
KDM4D-201ENST00000335080 CCER1Q8TC90 406 aaPredicted RBP15.67■□□□□ 0.1
KDM4D-201ENST00000335080 TRIM41Q8WV44 630 aa15.67■□□□□ 0.1
KDM4D-201ENST00000335080 YTHDC1Q96MU7 727 aaKnown RBP15.54■□□□□ 0.08
KDM4D-201ENST00000335080 CFTRP13569 1480 aa15.49■□□□□ 0.07
KDM4D-201ENST00000335080 CADPSQ9ULU8 1353 aa15.48■□□□□ 0.07
KDM4D-201ENST00000335080 PRDM2Q13029 1718 aa15.46■□□□□ 0.07
KDM4D-201ENST00000335080 LAMC3Q9Y6N6 1575 aa15.43■□□□□ 0.06
KDM4D-201ENST00000335080 TTBK1Q5TCY1 1321 aaPredicted RBP15.41■□□□□ 0.06
KDM4D-201ENST00000335080 NESP48681 1621 aa15.39■□□□□ 0.05
KDM4D-201ENST00000335080 ZNF316A6NFI3 1004 aaPredicted RBP15.36■□□□□ 0.05
KDM4D-201ENST00000335080 ABCC8Q09428 1581 aa15.34■□□□□ 0.05
KDM4D-201ENST00000335080 MIER1Q8N108 512 aa15.32■□□□□ 0.04
KDM4D-201ENST00000335080 FANCD2Q9BXW9 1451 aa15.31■□□□□ 0.04
KDM4D-201ENST00000335080 PDS5BQ9NTI5 1447 aa15.3■□□□□ 0.04
KDM4D-201ENST00000335080 WRNQ14191 1432 aaPredicted RBP eCLIP15.28■□□□□ 0.04
KDM4D-201ENST00000335080 CEP164Q9UPV0 1460 aa15.25■□□□□ 0.03
KDM4D-201ENST00000335080 KIF21AQ7Z4S6 1674 aa15.24■□□□□ 0.03
KDM4D-201ENST00000335080 SYNJ1O43426 1573 aa15.22■□□□□ 0.03
KDM4D-201ENST00000335080 TOP2BQ02880 1626 aa15.2■□□□□ 0.02
KDM4D-201ENST00000335080 BIVM-ERCC5R4GMW8 1640 aa15.2■□□□□ 0.02
KDM4D-201ENST00000335080 CUX1P39880 1505 aa15.19■□□□□ 0.02
KDM4D-201ENST00000335080 BCL11AQ9H165 835 aa15.15■□□□□ 0.02
KDM4D-201ENST00000335080 ERCC6Q03468 1493 aa15.15■□□□□ 0.02
KDM4D-201ENST00000335080 DNMBPQ6XZF7 1577 aa15.15■□□□□ 0.02
KDM4D-201ENST00000335080 URB2Q14146 1524 aaKnown RBP15.12■□□□□ 0.01
KDM4D-201ENST00000335080 TOPBP1Q92547 1522 aa15.12■□□□□ 0.01
KDM4D-201ENST00000335080 MRC2Q9UBG0 1479 aa15.11■□□□□ 0.01
KDM4D-201ENST00000335080 ANP32EQ9BTT0 268 aa15.11■□□□□ 0.01
KDM4D-201ENST00000335080 SUPT16HQ9Y5B9 1047 aaKnown RBP15.1■□□□□ 0.01
KDM4D-201ENST00000335080 FGD5Q6ZNL6 1462 aa15.06■□□□□ 0
KDM4D-201ENST00000335080 ILDR1Q86SU0 546 aaPredicted RBP15.06■□□□□ 0
KDM4D-201ENST00000335080 TSHZ2Q9NRE2 1034 aa15.06■□□□□ 0
KDM4D-201ENST00000335080 THOC2Q8NI27 1593 aaKnown RBP15.05■□□□□ -0
KDM4D-201ENST00000335080 WDR62O43379 1518 aa15.05■□□□□ -0
KDM4D-201ENST00000335080 CEP162Q5TB80 1403 aa15.03■□□□□ -0
KDM4D-201ENST00000335080 POLA1P09884 1462 aaPredicted RBP15.03■□□□□ -0
KDM4D-201ENST00000335080 HNRNPUL2Q1KMD3 747 aaKnown RBP15.01□□□□□ -0.01
KDM4D-201ENST00000335080 SOGA1O94964 1423 aa15□□□□□ -0.01
KDM4D-201ENST00000335080 CSRNP3Q8WYN3 585 aa14.99□□□□□ -0.01
KDM4D-201ENST00000335080 EEA1Q15075 1411 aa14.97□□□□□ -0.01
KDM4D-201ENST00000335080 RAD54L2Q9Y4B4 1467 aa14.96□□□□□ -0.01
KDM4D-201ENST00000335080 CLSPNQ9HAW4 1339 aa14.95□□□□□ -0.02
KDM4D-201ENST00000335080 RUSC2Q8N2Y8 1516 aa14.95□□□□□ -0.02
KDM4D-201ENST00000335080 ABCA10Q8WWZ4 1543 aa14.94□□□□□ -0.02
KDM4D-201ENST00000335080 KIF27Q86VH2 1401 aa14.93□□□□□ -0.02
KDM4D-201ENST00000335080 WDR97A6NE52 1622 aa14.93□□□□□ -0.02
KDM4D-201ENST00000335080 CUX2O14529 1486 aa14.93□□□□□ -0.02
KDM4D-201ENST00000335080 TARBP1Q13395 1621 aaKnown RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms