RNA–Protein interactions for RNA: ENST00000332349.4

JRKL-201, Transcript of JRK like, humanhuman

APPRIS P1 TSL 2 BASIC

Gene JRKL, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
JRKL-201ENST00000332349 NISCHQ9Y2I1 1504 aa27.62■■■□□ 2.01
JRKL-201ENST00000332349 CCDC180Q9P1Z9 1646 aa23.89■■□□□ 1.41
JRKL-201ENST00000332349 DCAF8L2P0C7V8 631 aa23.46■■□□□ 1.35
JRKL-201ENST00000332349 ABCC9O60706 1549 aa23.19■■□□□ 1.3
JRKL-201ENST00000332349 ZCCHC6Q5VYS8 1495 aaKnown RBP23.13■■□□□ 1.29
JRKL-201ENST00000332349 SHROOM4Q9ULL8 1493 aa23.02■■□□□ 1.28
JRKL-201ENST00000332349 DCAF1Q9Y4B6 1507 aa22.57■■□□□ 1.2
JRKL-201ENST00000332349 SCRIBQ14160 1630 aa22.36■■□□□ 1.17
JRKL-201ENST00000332349 NACADO15069 1562 aa22.36■■□□□ 1.17
JRKL-201ENST00000332349 MYO15BQ96JP2 1530 aa22.28■■□□□ 1.16
JRKL-201ENST00000332349 RB1CC1Q8TDY2 1594 aa22.25■■□□□ 1.15
JRKL-201ENST00000332349 SUPT5HO00267 1087 aaKnown RBP22.1■■□□□ 1.13
JRKL-201ENST00000332349 PABPN1Q86U42 306 aaKnown RBP eCLIP22.01■■□□□ 1.11
JRKL-201ENST00000332349 UNC13AQ9UPW8 1703 aa21.87■■□□□ 1.09
JRKL-201ENST00000332349 CECR2Q9BXF3 1484 aa21.69■■□□□ 1.06
JRKL-201ENST00000332349 BICRAQ9NZM4 1560 aa21.66■■□□□ 1.06
JRKL-201ENST00000332349 RSF1Q96T23 1441 aaPredicted RBP21.5■■□□□ 1.03
JRKL-201ENST00000332349 MROH2BQ7Z745 1585 aa21.47■■□□□ 1.03
JRKL-201ENST00000332349 WIZO95785 1651 aa21.3■■□□□ 1
JRKL-201ENST00000332349 BAZ1AQ9NRL2 1556 aaPredicted RBP21.29■■□□□ 1
JRKL-201ENST00000332349 SMARCA4P51532 1647 aa21.24■□□□□ 0.99
JRKL-201ENST00000332349 EIF4G1Q04637 1599 aaKnown RBP21.04■□□□□ 0.96
JRKL-201ENST00000332349 ATAD2BQ9ULI0 1458 aa20.97■□□□□ 0.95
JRKL-201ENST00000332349 CHIC1Q5VXU3 224 aa20.9■□□□□ 0.94
JRKL-201ENST00000332349 TOP2AP11388 1531 aaKnown RBP20.89■□□□□ 0.94
JRKL-201ENST00000332349 BAZ1BQ9UIG0 1483 aaKnown RBP20.88■□□□□ 0.93
JRKL-201ENST00000332349 CCDC88BA6NC98 1476 aa20.84■□□□□ 0.93
JRKL-201ENST00000332349 SMARCA2P51531 1590 aa20.83■□□□□ 0.93
JRKL-201ENST00000332349 PEG3Q9GZU2 1588 aa20.81■□□□□ 0.92
JRKL-201ENST00000332349 CC2D2AQ9P2K1 1620 aa20.8■□□□□ 0.92
JRKL-201ENST00000332349 DNAJC5BQ9UF47 199 aa20.71■□□□□ 0.91
JRKL-201ENST00000332349 NCAPD3P42695 1498 aa20.71■□□□□ 0.91
JRKL-201ENST00000332349 TRIM41Q8WV44 630 aa20.6■□□□□ 0.89
JRKL-201ENST00000332349 HMGXB3Q12766 1538 aa20.59■□□□□ 0.89
JRKL-201ENST00000332349 FAM9AQ8IZU1 332 aaPredicted RBP20.5■□□□□ 0.87
JRKL-201ENST00000332349 ABCC8Q09428 1581 aa20.5■□□□□ 0.87
JRKL-201ENST00000332349 EHMT2Q96KQ7 1210 aa20.44■□□□□ 0.86
JRKL-201ENST00000332349 LOC105371045A0A1W2PR82 267 aa20.35■□□□□ 0.85
JRKL-201ENST00000332349 NESP48681 1621 aa20.32■□□□□ 0.84
JRKL-201ENST00000332349 CADPSQ9ULU8 1353 aa20.29■□□□□ 0.84
JRKL-201ENST00000332349 CFTRP13569 1480 aa20.27■□□□□ 0.84
JRKL-201ENST00000332349 WRNQ14191 1432 aaPredicted RBP eCLIP20.24■□□□□ 0.83
JRKL-201ENST00000332349 SYNJ1O43426 1573 aa20.16■□□□□ 0.82
JRKL-201ENST00000332349 SOGA1O94964 1423 aa20.11■□□□□ 0.81
JRKL-201ENST00000332349 FANCD2Q9BXW9 1451 aa20.09■□□□□ 0.81
JRKL-201ENST00000332349 RUSC2Q8N2Y8 1516 aa20.08■□□□□ 0.8
JRKL-201ENST00000332349 CUX1P39880 1505 aa20.04■□□□□ 0.8
JRKL-201ENST00000332349 LAMC3Q9Y6N6 1575 aa19.98■□□□□ 0.79
JRKL-201ENST00000332349 PRDM2Q13029 1718 aa19.97■□□□□ 0.79
JRKL-201ENST00000332349 TOP2BQ02880 1626 aa19.95■□□□□ 0.78
JRKL-201ENST00000332349 PDS5BQ9NTI5 1447 aa19.94■□□□□ 0.78
JRKL-201ENST00000332349 CEP164Q9UPV0 1460 aa19.93■□□□□ 0.78
JRKL-201ENST00000332349 KIF21AQ7Z4S6 1674 aa19.9■□□□□ 0.78
JRKL-201ENST00000332349 CSRNP3Q8WYN3 585 aa19.9■□□□□ 0.78
JRKL-201ENST00000332349 BIVM-ERCC5R4GMW8 1640 aa19.87■□□□□ 0.77
JRKL-201ENST00000332349 FGD5Q6ZNL6 1462 aa19.86■□□□□ 0.77
JRKL-201ENST00000332349 URB2Q14146 1524 aaKnown RBP19.85■□□□□ 0.77
JRKL-201ENST00000332349 TOPBP1Q92547 1522 aa19.83■□□□□ 0.77
JRKL-201ENST00000332349 RAD54L2Q9Y4B4 1467 aa19.83■□□□□ 0.77
JRKL-201ENST00000332349 ERCC6Q03468 1493 aa19.82■□□□□ 0.76
JRKL-201ENST00000332349 UBTFP17480 764 aaKnown RBP19.81■□□□□ 0.76
JRKL-201ENST00000332349 RANGAP1P46060 587 aaPredicted RBP19.81■□□□□ 0.76
JRKL-201ENST00000332349 CUX2O14529 1486 aa19.77■□□□□ 0.76
JRKL-201ENST00000332349 DNMBPQ6XZF7 1577 aa19.77■□□□□ 0.75
JRKL-201ENST00000332349 POLA1P09884 1462 aaPredicted RBP19.76■□□□□ 0.75
JRKL-201ENST00000332349 PCGF6Q9BYE7 350 aa19.71■□□□□ 0.75
JRKL-201ENST00000332349 TDRD9Q8NDG6 1382 aaKnown RBP19.71■□□□□ 0.75
JRKL-201ENST00000332349 KIF27Q86VH2 1401 aa19.7■□□□□ 0.74
JRKL-201ENST00000332349 EEA1Q15075 1411 aa19.7■□□□□ 0.74
JRKL-201ENST00000332349 MRC2Q9UBG0 1479 aa19.67■□□□□ 0.74
JRKL-201ENST00000332349 RAPGEF2Q9Y4G8 1499 aa19.64■□□□□ 0.74
JRKL-201ENST00000332349 IGF1RP08069 1367 aa19.6■□□□□ 0.73
JRKL-201ENST00000332349 GOLGA3Q08378 1498 aa19.58■□□□□ 0.72
JRKL-201ENST00000332349 PPARGC1BQ86YN6 1023 aaKnown RBP19.57■□□□□ 0.72
JRKL-201ENST00000332349 ABCA10Q8WWZ4 1543 aa19.55■□□□□ 0.72
JRKL-201ENST00000332349 AQRO60306 1485 aaKnown RBP eCLIP19.55■□□□□ 0.72
JRKL-201ENST00000332349 ZNF608Q9ULD9 1512 aaPredicted RBP19.51■□□□□ 0.71
JRKL-201ENST00000332349 CARMIL1Q5VZK9 1371 aa19.51■□□□□ 0.71
JRKL-201ENST00000332349 WDR62O43379 1518 aa19.5■□□□□ 0.71
JRKL-201ENST00000332349 PRXQ9BXM0 1461 aa19.5■□□□□ 0.71
JRKL-201ENST00000332349 CEP162Q5TB80 1403 aa19.49■□□□□ 0.71
JRKL-201ENST00000332349 THOC2Q8NI27 1593 aaKnown RBP19.49■□□□□ 0.71
JRKL-201ENST00000332349 TNIKQ9UKE5 1360 aa19.49■□□□□ 0.71
JRKL-201ENST00000332349 KIF21BO75037 1637 aa19.48■□□□□ 0.71
JRKL-201ENST00000332349 GAPVD1Q14C86 1478 aa19.48■□□□□ 0.71
JRKL-201ENST00000332349 TTBK1Q5TCY1 1321 aaPredicted RBP19.48■□□□□ 0.71
JRKL-201ENST00000332349 TARBP1Q13395 1621 aaKnown RBP19.47■□□□□ 0.71
JRKL-201ENST00000332349 WDR97A6NE52 1622 aa19.42■□□□□ 0.7
JRKL-201ENST00000332349 FBLN2P98095 1184 aa19.39■□□□□ 0.7
JRKL-201ENST00000332349 IFT140Q96RY7 1462 aa19.39■□□□□ 0.69
JRKL-201ENST00000332349 TRIM26Q12899 539 aaPredicted RBP19.38■□□□□ 0.69
JRKL-201ENST00000332349 P3H3Q8IVL6 736 aa19.38■□□□□ 0.69
JRKL-201ENST00000332349 ABCA5Q8WWZ7 1642 aa19.37■□□□□ 0.69
JRKL-201ENST00000332349 CLIP1P30622 1438 aa19.36■□□□□ 0.69
JRKL-201ENST00000332349 ERICH3Q5RHP9 1530 aa19.34■□□□□ 0.69
JRKL-201ENST00000332349 EIF4G3O43432 1585 aaKnown RBP19.29■□□□□ 0.68
JRKL-201ENST00000332349 GRIN2BQ13224 1484 aa19.27■□□□□ 0.68
JRKL-201ENST00000332349 PBRM1Q86U86 1689 aa19.27■□□□□ 0.68
JRKL-201ENST00000332349 SNAPC4Q5SXM2 1469 aa19.26■□□□□ 0.67
JRKL-201ENST00000332349 CHMP7Q8WUX9 453 aaPredicted RBP19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms