RNA–Protein interactions for RNA: ENST00000331491.1

HIST2H3D-201, Transcript of histone cluster 2 H3 family member d, humanhuman

APPRIS P1 BASIC

Gene HIST2H3D, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3D-201ENST00000331491 NISCHQ9Y2I1 1504 aa41.69■■■■■ 4.27
HIST2H3D-201ENST00000331491 ABCC9O60706 1549 aa37.83■■■■□ 3.65
HIST2H3D-201ENST00000331491 CCDC180Q9P1Z9 1646 aa37.55■■■■□ 3.6
HIST2H3D-201ENST00000331491 RB1CC1Q8TDY2 1594 aa35.89■■■■□ 3.34
HIST2H3D-201ENST00000331491 DNAJC5BQ9UF47 199 aa35.8■■■■□ 3.32
HIST2H3D-201ENST00000331491 NACADO15069 1562 aa35.59■■■■□ 3.29
HIST2H3D-201ENST00000331491 DCAF8L2P0C7V8 631 aa35.22■■■■□ 3.23
HIST2H3D-201ENST00000331491 PABPN1Q86U42 306 aaKnown RBP eCLIP35.15■■■■□ 3.22
HIST2H3D-201ENST00000331491 UNC13AQ9UPW8 1703 aa35.07■■■■□ 3.2
HIST2H3D-201ENST00000331491 MYO15BQ96JP2 1530 aa35.04■■■■□ 3.2
HIST2H3D-201ENST00000331491 BICRAQ9NZM4 1560 aa34.88■■■■□ 3.17
HIST2H3D-201ENST00000331491 ZCCHC6Q5VYS8 1495 aaKnown RBP34.5■■■■□ 3.11
HIST2H3D-201ENST00000331491 DCAF1Q9Y4B6 1507 aa34.45■■■■□ 3.11
HIST2H3D-201ENST00000331491 SHROOM4Q9ULL8 1493 aa34.42■■■■□ 3.1
HIST2H3D-201ENST00000331491 CC2D2AQ9P2K1 1620 aa34.18■■■■□ 3.06
HIST2H3D-201ENST00000331491 SCRIBQ14160 1630 aa34.15■■■■□ 3.06
HIST2H3D-201ENST00000331491 CECR2Q9BXF3 1484 aa34.14■■■■□ 3.06
HIST2H3D-201ENST00000331491 EIF4G1Q04637 1599 aaKnown RBP34.04■■■■□ 3.04
HIST2H3D-201ENST00000331491 DNAJC5Q9H3Z4 198 aa33.13■■■□□ 2.89
HIST2H3D-201ENST00000331491 NCAPD3P42695 1498 aa32.87■■■□□ 2.85
HIST2H3D-201ENST00000331491 CUX2O14529 1486 aa32.78■■■□□ 2.84
HIST2H3D-201ENST00000331491 ATAD2BQ9ULI0 1458 aa32.71■■■□□ 2.83
HIST2H3D-201ENST00000331491 ERCC6Q03468 1493 aa32.67■■■□□ 2.82
HIST2H3D-201ENST00000331491 SMARCA2P51531 1590 aa32.59■■■□□ 2.81
HIST2H3D-201ENST00000331491 HMGXB3Q12766 1538 aa32.59■■■□□ 2.81
HIST2H3D-201ENST00000331491 SMARCA4P51532 1647 aa32.58■■■□□ 2.81
HIST2H3D-201ENST00000331491 NESP48681 1621 aa32.41■■■□□ 2.78
HIST2H3D-201ENST00000331491 BAZ1AQ9NRL2 1556 aaPredicted RBP32.38■■■□□ 2.77
HIST2H3D-201ENST00000331491 BAZ1BQ9UIG0 1483 aaKnown RBP32.35■■■□□ 2.77
HIST2H3D-201ENST00000331491 PEG3Q9GZU2 1588 aa32.32■■■□□ 2.76
HIST2H3D-201ENST00000331491 THOC2Q8NI27 1593 aaKnown RBP32.18■■■□□ 2.74
HIST2H3D-201ENST00000331491 LAMC3Q9Y6N6 1575 aa32.16■■■□□ 2.74
HIST2H3D-201ENST00000331491 MROH2BQ7Z745 1585 aa32.11■■■□□ 2.73
HIST2H3D-201ENST00000331491 KIF21AQ7Z4S6 1674 aa31.99■■■□□ 2.71
HIST2H3D-201ENST00000331491 PDS5BQ9NTI5 1447 aa31.98■■■□□ 2.71
HIST2H3D-201ENST00000331491 CADPSQ9ULU8 1353 aa31.83■■■□□ 2.69
HIST2H3D-201ENST00000331491 MRC2Q9UBG0 1479 aa31.72■■■□□ 2.67
HIST2H3D-201ENST00000331491 WIZO95785 1651 aa31.69■■■□□ 2.66
HIST2H3D-201ENST00000331491 WDR62O43379 1518 aa31.67■■■□□ 2.66
HIST2H3D-201ENST00000331491 CEP164Q9UPV0 1460 aa31.52■■■□□ 2.64
HIST2H3D-201ENST00000331491 FANCD2Q9BXW9 1451 aa31.46■■■□□ 2.63
HIST2H3D-201ENST00000331491 TRIM41Q8WV44 630 aa31.46■■■□□ 2.63
HIST2H3D-201ENST00000331491 CFTRP13569 1480 aa31.42■■■□□ 2.62
HIST2H3D-201ENST00000331491 RSF1Q96T23 1441 aaPredicted RBP31.33■■■□□ 2.61
HIST2H3D-201ENST00000331491 TOP2AP11388 1531 aaKnown RBP31.29■■■□□ 2.6
HIST2H3D-201ENST00000331491 URB2Q14146 1524 aaKnown RBP31.24■■■□□ 2.59
HIST2H3D-201ENST00000331491 OSCARQ8IYS5 282 aa31.2■■■□□ 2.59
HIST2H3D-201ENST00000331491 PRDM2Q13029 1718 aa31.04■■■□□ 2.56
HIST2H3D-201ENST00000331491 CCDC88BA6NC98 1476 aa30.93■■■□□ 2.54
HIST2H3D-201ENST00000331491 IFT140Q96RY7 1462 aa30.92■■■□□ 2.54
HIST2H3D-201ENST00000331491 ZNF608Q9ULD9 1512 aaPredicted RBP30.89■■■□□ 2.54
HIST2H3D-201ENST00000331491 RIMBP3CA6NJZ7 1639 aa30.84■■■□□ 2.53
HIST2H3D-201ENST00000331491 RIMBP3BA6NNM3 1639 aa30.84■■■□□ 2.53
HIST2H3D-201ENST00000331491 RIMBP3Q9UFD9 1639 aa30.84■■■□□ 2.53
HIST2H3D-201ENST00000331491 TOPBP1Q92547 1522 aa30.83■■■□□ 2.53
HIST2H3D-201ENST00000331491 ABCC8Q09428 1581 aa30.76■■■□□ 2.52
HIST2H3D-201ENST00000331491 ARHGEF11O15085 1522 aa30.72■■■□□ 2.51
HIST2H3D-201ENST00000331491 EIF4G3O43432 1585 aaKnown RBP30.71■■■□□ 2.51
HIST2H3D-201ENST00000331491 DNMBPQ6XZF7 1577 aa30.7■■■□□ 2.5
HIST2H3D-201ENST00000331491 TARBP1Q13395 1621 aaKnown RBP30.6■■■□□ 2.49
HIST2H3D-201ENST00000331491 AQRO60306 1485 aaKnown RBP eCLIP30.56■■■□□ 2.48
HIST2H3D-201ENST00000331491 CHD1O14646 1710 aa30.52■■■□□ 2.48
HIST2H3D-201ENST00000331491 POLA1P09884 1462 aaPredicted RBP30.51■■■□□ 2.48
HIST2H3D-201ENST00000331491 CYB5RLQ6IPT4 315 aa30.47■■■□□ 2.47
HIST2H3D-201ENST00000331491 ARAP1Q96P48 1450 aa30.4■■■□□ 2.46
HIST2H3D-201ENST00000331491 FBLN2P98095 1184 aa30.38■■■□□ 2.45
HIST2H3D-201ENST00000331491 RAD54L2Q9Y4B4 1467 aa30.38■■■□□ 2.45
HIST2H3D-201ENST00000331491 SOGA1O94964 1423 aa30.34■■■□□ 2.45
HIST2H3D-201ENST00000331491 TDRD9Q8NDG6 1382 aaKnown RBP30.32■■■□□ 2.44
HIST2H3D-201ENST00000331491 WDR97A6NE52 1622 aa30.29■■■□□ 2.44
HIST2H3D-201ENST00000331491 FGD5Q6ZNL6 1462 aa30.25■■■□□ 2.43
HIST2H3D-201ENST00000331491 SNAPC4Q5SXM2 1469 aa30.25■■■□□ 2.43
HIST2H3D-201ENST00000331491 TRHP20396 242 aaPredicted RBP30.21■■■□□ 2.43
HIST2H3D-201ENST00000331491 CLASP1Q7Z460 1538 aa30.21■■■□□ 2.43
HIST2H3D-201ENST00000331491 CUX1P39880 1505 aa30.19■■■□□ 2.42
HIST2H3D-201ENST00000331491 MAGI1Q96QZ7 1491 aaPredicted RBP30.18■■■□□ 2.42
HIST2H3D-201ENST00000331491 GRIN2BQ13224 1484 aa30.13■■■□□ 2.41
HIST2H3D-201ENST00000331491 SYNJ1O43426 1573 aa30.13■■■□□ 2.41
HIST2H3D-201ENST00000331491 CHMP7Q8WUX9 453 aaPredicted RBP30.13■■■□□ 2.41
HIST2H3D-201ENST00000331491 SYNJ2O15056 1496 aa30.08■■■□□ 2.41
HIST2H3D-201ENST00000331491 GAPVD1Q14C86 1478 aa29.98■■■□□ 2.39
HIST2H3D-201ENST00000331491 PBRM1Q86U86 1689 aa29.97■■■□□ 2.39
HIST2H3D-201ENST00000331491 ABCA10Q8WWZ4 1543 aa29.91■■■□□ 2.38
HIST2H3D-201ENST00000331491 ABCA5Q8WWZ7 1642 aa29.89■■■□□ 2.38
HIST2H3D-201ENST00000331491 GRIN2AQ12879 1464 aa29.74■■■□□ 2.35
HIST2H3D-201ENST00000331491 WRNQ14191 1432 aaPredicted RBP eCLIP29.71■■■□□ 2.35
HIST2H3D-201ENST00000331491 ADAMTS12P58397 1594 aa29.69■■■□□ 2.34
HIST2H3D-201ENST00000331491 ERCC6L2Q5T890 1561 aa29.69■■■□□ 2.34
HIST2H3D-201ENST00000331491 NUP160Q12769 1436 aa29.68■■■□□ 2.34
HIST2H3D-201ENST00000331491 CEP170Q5SW79 1584 aa29.65■■■□□ 2.34
HIST2H3D-201ENST00000331491 SUPT5HO00267 1087 aaKnown RBP29.62■■■□□ 2.33
HIST2H3D-201ENST00000331491 TOP2BQ02880 1626 aa29.62■■■□□ 2.33
HIST2H3D-201ENST00000331491 BIVM-ERCC5R4GMW8 1640 aa29.62■■■□□ 2.33
HIST2H3D-201ENST00000331491 FHAD1B1AJZ9 1412 aa29.6■■■□□ 2.33
HIST2H3D-201ENST00000331491 SHROOM2Q13796 1616 aa29.58■■■□□ 2.33
HIST2H3D-201ENST00000331491 AEBP2Q6ZN18 517 aaPredicted RBP29.56■■■□□ 2.32
HIST2H3D-201ENST00000331491 ERICH3Q5RHP9 1530 aa29.54■■■□□ 2.32
HIST2H3D-201ENST00000331491 PRG4Q92954 1404 aaPredicted RBP29.38■■■□□ 2.29
HIST2H3D-201ENST00000331491 JPH4Q96JJ6 628 aa29.34■■■□□ 2.29
HIST2H3D-201ENST00000331491 KIF13AQ9H1H9 1805 aa29.34■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms