RNA–Protein interactions for RNA: ENST00000330752.12

HNRNPA1-201, Transcript of heterogeneous nuclear ribonucleoprotein A1, humanhuman

TSL 5 BASIC

Gene HNRNPA1, Length 1,294 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPA1-201ENST00000330752 NISCHQ9Y2I1 1504 aa33.5■■■□□ 2.95
HNRNPA1-201ENST00000330752 CCDC180Q9P1Z9 1646 aa29.78■■■□□ 2.36
HNRNPA1-201ENST00000330752 ABCC9O60706 1549 aa28.6■■■□□ 2.17
HNRNPA1-201ENST00000330752 ZCCHC6Q5VYS8 1495 aaKnown RBP28.02■■■□□ 2.08
HNRNPA1-201ENST00000330752 NACADO15069 1562 aa27.81■■■□□ 2.04
HNRNPA1-201ENST00000330752 DCAF1Q9Y4B6 1507 aa27.78■■■□□ 2.04
HNRNPA1-201ENST00000330752 RB1CC1Q8TDY2 1594 aa27.77■■■□□ 2.04
HNRNPA1-201ENST00000330752 MYO15BQ96JP2 1530 aa27.76■■■□□ 2.03
HNRNPA1-201ENST00000330752 DCAF8L2P0C7V8 631 aa27.63■■■□□ 2.01
HNRNPA1-201ENST00000330752 UNC13AQ9UPW8 1703 aa27.28■■□□□ 1.96
HNRNPA1-201ENST00000330752 SCRIBQ14160 1630 aa27.1■■□□□ 1.93
HNRNPA1-201ENST00000330752 BICRAQ9NZM4 1560 aa26.92■■□□□ 1.9
HNRNPA1-201ENST00000330752 SHROOM4Q9ULL8 1493 aa26.68■■□□□ 1.86
HNRNPA1-201ENST00000330752 PABPN1Q86U42 306 aaKnown RBP eCLIP26.67■■□□□ 1.86
HNRNPA1-201ENST00000330752 EIF4G1Q04637 1599 aaKnown RBP26.16■■□□□ 1.78
HNRNPA1-201ENST00000330752 CECR2Q9BXF3 1484 aa26.01■■□□□ 1.75
HNRNPA1-201ENST00000330752 SMARCA4P51532 1647 aa25.99■■□□□ 1.75
HNRNPA1-201ENST00000330752 CC2D2AQ9P2K1 1620 aa25.97■■□□□ 1.75
HNRNPA1-201ENST00000330752 BAZ1AQ9NRL2 1556 aaPredicted RBP25.97■■□□□ 1.75
HNRNPA1-201ENST00000330752 MROH2BQ7Z745 1585 aa25.82■■□□□ 1.72
HNRNPA1-201ENST00000330752 DNAJC5BQ9UF47 199 aa25.81■■□□□ 1.72
HNRNPA1-201ENST00000330752 PEG3Q9GZU2 1588 aa25.73■■□□□ 1.71
HNRNPA1-201ENST00000330752 SMARCA2P51531 1590 aa25.7■■□□□ 1.71
HNRNPA1-201ENST00000330752 ATAD2BQ9ULI0 1458 aa25.66■■□□□ 1.7
HNRNPA1-201ENST00000330752 WIZO95785 1651 aa25.61■■□□□ 1.69
HNRNPA1-201ENST00000330752 RSF1Q96T23 1441 aaPredicted RBP25.6■■□□□ 1.69
HNRNPA1-201ENST00000330752 NCAPD3P42695 1498 aa25.59■■□□□ 1.69
HNRNPA1-201ENST00000330752 HMGXB3Q12766 1538 aa25.58■■□□□ 1.69
HNRNPA1-201ENST00000330752 BAZ1BQ9UIG0 1483 aaKnown RBP25.48■■□□□ 1.67
HNRNPA1-201ENST00000330752 TOP2AP11388 1531 aaKnown RBP25.36■■□□□ 1.65
HNRNPA1-201ENST00000330752 SUPT5HO00267 1087 aaKnown RBP25.1■■□□□ 1.61
HNRNPA1-201ENST00000330752 CCDC88BA6NC98 1476 aa24.97■■□□□ 1.59
HNRNPA1-201ENST00000330752 LAMC3Q9Y6N6 1575 aa24.94■■□□□ 1.58
HNRNPA1-201ENST00000330752 PRDM2Q13029 1718 aa24.89■■□□□ 1.57
HNRNPA1-201ENST00000330752 NESP48681 1621 aa24.86■■□□□ 1.57
HNRNPA1-201ENST00000330752 CADPSQ9ULU8 1353 aa24.81■■□□□ 1.56
HNRNPA1-201ENST00000330752 CFTRP13569 1480 aa24.8■■□□□ 1.56
HNRNPA1-201ENST00000330752 KIF21AQ7Z4S6 1674 aa24.73■■□□□ 1.55
HNRNPA1-201ENST00000330752 PDS5BQ9NTI5 1447 aa24.65■■□□□ 1.54
HNRNPA1-201ENST00000330752 ERCC6Q03468 1493 aa24.62■■□□□ 1.53
HNRNPA1-201ENST00000330752 FANCD2Q9BXW9 1451 aa24.58■■□□□ 1.53
HNRNPA1-201ENST00000330752 CEP164Q9UPV0 1460 aa24.55■■□□□ 1.52
HNRNPA1-201ENST00000330752 THOC2Q8NI27 1593 aaKnown RBP24.54■■□□□ 1.52
HNRNPA1-201ENST00000330752 MRC2Q9UBG0 1479 aa24.43■■□□□ 1.5
HNRNPA1-201ENST00000330752 WDR62O43379 1518 aa24.39■■□□□ 1.49
HNRNPA1-201ENST00000330752 URB2Q14146 1524 aaKnown RBP24.34■■□□□ 1.49
HNRNPA1-201ENST00000330752 DNMBPQ6XZF7 1577 aa24.3■■□□□ 1.48
HNRNPA1-201ENST00000330752 CUX2O14529 1486 aa24.27■■□□□ 1.48
HNRNPA1-201ENST00000330752 ABCC8Q09428 1581 aa24.27■■□□□ 1.48
HNRNPA1-201ENST00000330752 TOPBP1Q92547 1522 aa24.25■■□□□ 1.47
HNRNPA1-201ENST00000330752 CUX1P39880 1505 aa24.21■■□□□ 1.47
HNRNPA1-201ENST00000330752 BIVM-ERCC5R4GMW8 1640 aa24.19■■□□□ 1.46
HNRNPA1-201ENST00000330752 SYNJ1O43426 1573 aa24.15■■□□□ 1.46
HNRNPA1-201ENST00000330752 TOP2BQ02880 1626 aa24.14■■□□□ 1.46
HNRNPA1-201ENST00000330752 WRNQ14191 1432 aaPredicted RBP eCLIP24.14■■□□□ 1.45
HNRNPA1-201ENST00000330752 POLA1P09884 1462 aaPredicted RBP24.07■■□□□ 1.44
HNRNPA1-201ENST00000330752 FGD5Q6ZNL6 1462 aa24.07■■□□□ 1.44
HNRNPA1-201ENST00000330752 TARBP1Q13395 1621 aaKnown RBP24.02■■□□□ 1.44
HNRNPA1-201ENST00000330752 WDR97A6NE52 1622 aa24■■□□□ 1.43
HNRNPA1-201ENST00000330752 IFT140Q96RY7 1462 aa23.99■■□□□ 1.43
HNRNPA1-201ENST00000330752 RAD54L2Q9Y4B4 1467 aa23.91■■□□□ 1.42
HNRNPA1-201ENST00000330752 SOGA1O94964 1423 aa23.91■■□□□ 1.42
HNRNPA1-201ENST00000330752 EIF4G3O43432 1585 aaKnown RBP23.88■■□□□ 1.41
HNRNPA1-201ENST00000330752 ABCA10Q8WWZ4 1543 aa23.84■■□□□ 1.41
HNRNPA1-201ENST00000330752 ZNF608Q9ULD9 1512 aaPredicted RBP23.84■■□□□ 1.41
HNRNPA1-201ENST00000330752 ABCA5Q8WWZ7 1642 aa23.81■■□□□ 1.4
HNRNPA1-201ENST00000330752 PBRM1Q86U86 1689 aa23.78■■□□□ 1.4
HNRNPA1-201ENST00000330752 AQRO60306 1485 aaKnown RBP eCLIP23.71■■□□□ 1.396e-14■■■□□ 19
HNRNPA1-201ENST00000330752 TRIM41Q8WV44 630 aa23.71■■□□□ 1.39
HNRNPA1-201ENST00000330752 TDRD9Q8NDG6 1382 aaKnown RBP23.7■■□□□ 1.38
HNRNPA1-201ENST00000330752 GAPVD1Q14C86 1478 aa23.68■■□□□ 1.38
HNRNPA1-201ENST00000330752 CHIC1Q5VXU3 224 aa23.66■■□□□ 1.38
HNRNPA1-201ENST00000330752 GRIN2BQ13224 1484 aa23.63■■□□□ 1.37
HNRNPA1-201ENST00000330752 ERICH3Q5RHP9 1530 aa23.6■■□□□ 1.37
HNRNPA1-201ENST00000330752 KIF27Q86VH2 1401 aa23.59■■□□□ 1.37
HNRNPA1-201ENST00000330752 SNAPC4Q5SXM2 1469 aa23.56■■□□□ 1.36
HNRNPA1-201ENST00000330752 MAGI1Q96QZ7 1491 aaPredicted RBP23.56■■□□□ 1.36
HNRNPA1-201ENST00000330752 CHD1O14646 1710 aa23.56■■□□□ 1.36
HNRNPA1-201ENST00000330752 ADAMTS12P58397 1594 aa23.54■■□□□ 1.36
HNRNPA1-201ENST00000330752 CUL7Q14999 1698 aa23.52■■□□□ 1.36
HNRNPA1-201ENST00000330752 RUSC2Q8N2Y8 1516 aa23.49■■□□□ 1.35
HNRNPA1-201ENST00000330752 SYNJ2O15056 1496 aa23.45■■□□□ 1.34
HNRNPA1-201ENST00000330752 EEA1Q15075 1411 aa23.42■■□□□ 1.34
HNRNPA1-201ENST00000330752 FHAD1B1AJZ9 1412 aa23.41■■□□□ 1.34
HNRNPA1-201ENST00000330752 IGF1RP08069 1367 aa23.4■■□□□ 1.34
HNRNPA1-201ENST00000330752 GRIN2AQ12879 1464 aa23.36■■□□□ 1.33
HNRNPA1-201ENST00000330752 CHMP7Q8WUX9 453 aaPredicted RBP23.29■■□□□ 1.32
HNRNPA1-201ENST00000330752 CARMIL1Q5VZK9 1371 aa23.28■■□□□ 1.32
HNRNPA1-201ENST00000330752 FBLN2P98095 1184 aa23.27■■□□□ 1.32
HNRNPA1-201ENST00000330752 CEP170Q5SW79 1584 aa23.26■■□□□ 1.31
HNRNPA1-201ENST00000330752 PRXQ9BXM0 1461 aa23.25■■□□□ 1.31
HNRNPA1-201ENST00000330752 RAPGEF2Q9Y4G8 1499 aa23.24■■□□□ 1.31
HNRNPA1-201ENST00000330752 CLASP1Q7Z460 1538 aa23.23■■□□□ 1.31
HNRNPA1-201ENST00000330752 KIF21BO75037 1637 aa23.23■■□□□ 1.31
HNRNPA1-201ENST00000330752 CSRNP3Q8WYN3 585 aa23.22■■□□□ 1.31
HNRNPA1-201ENST00000330752 NUP160Q12769 1436 aa23.22■■□□□ 1.31
HNRNPA1-201ENST00000330752 CTTNBP2Q8WZ74 1663 aa23.19■■□□□ 1.3
HNRNPA1-201ENST00000330752 OSCARQ8IYS5 282 aa23.19■■□□□ 1.3
HNRNPA1-201ENST00000330752 FAM9AQ8IZU1 332 aaPredicted RBP23.18■■□□□ 1.3
HNRNPA1-201ENST00000330752 SHROOM2Q13796 1616 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms