RNA–Protein interactions for RNA: ENST00000330513.9

TGIF1-201, Transcript of TGFB induced factor homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene TGIF1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGIF1-201ENST00000330513 NISCHQ9Y2I1 1504 aa36.59■■■■□ 3.45
TGIF1-201ENST00000330513 CCDC180Q9P1Z9 1646 aa32.11■■■□□ 2.73
TGIF1-201ENST00000330513 ZCCHC6Q5VYS8 1495 aaKnown RBP30.75■■■□□ 2.51
TGIF1-201ENST00000330513 ABCC9O60706 1549 aa30.43■■■□□ 2.46
TGIF1-201ENST00000330513 DCAF1Q9Y4B6 1507 aa30.3■■■□□ 2.44
TGIF1-201ENST00000330513 MYO15BQ96JP2 1530 aa30.04■■■□□ 2.4
TGIF1-201ENST00000330513 DCAF8L2P0C7V8 631 aa29.98■■■□□ 2.39
TGIF1-201ENST00000330513 NACADO15069 1562 aa29.88■■■□□ 2.37
TGIF1-201ENST00000330513 RB1CC1Q8TDY2 1594 aa29.67■■■□□ 2.34
TGIF1-201ENST00000330513 SHROOM4Q9ULL8 1493 aa29.54■■■□□ 2.32
TGIF1-201ENST00000330513 SCRIBQ14160 1630 aa29.42■■■□□ 2.3
TGIF1-201ENST00000330513 UNC13AQ9UPW8 1703 aa29.21■■■□□ 2.27
TGIF1-201ENST00000330513 BICRAQ9NZM4 1560 aa28.87■■■□□ 2.21
TGIF1-201ENST00000330513 PABPN1Q86U42 306 aaKnown RBP eCLIP28.55■■■□□ 2.16
TGIF1-201ENST00000330513 CECR2Q9BXF3 1484 aa28.44■■■□□ 2.14
TGIF1-201ENST00000330513 MROH2BQ7Z745 1585 aa28.27■■■□□ 2.12
TGIF1-201ENST00000330513 BAZ1AQ9NRL2 1556 aaPredicted RBP28.27■■■□□ 2.12
TGIF1-201ENST00000330513 RSF1Q96T23 1441 aaPredicted RBP28.26■■■□□ 2.11
TGIF1-201ENST00000330513 SUPT5HO00267 1087 aaKnown RBP28.25■■■□□ 2.11
TGIF1-201ENST00000330513 SMARCA4P51532 1647 aa28.22■■■□□ 2.11
TGIF1-201ENST00000330513 WIZO95785 1651 aa28.04■■■□□ 2.08
TGIF1-201ENST00000330513 EIF4G1Q04637 1599 aaKnown RBP27.97■■■□□ 2.07
TGIF1-201ENST00000330513 PEG3Q9GZU2 1588 aa27.92■■■□□ 2.06
TGIF1-201ENST00000330513 DNAJC5BQ9UF47 199 aa27.79■■■□□ 2.04
TGIF1-201ENST00000330513 ATAD2BQ9ULI0 1458 aa27.76■■■□□ 2.03
TGIF1-201ENST00000330513 TOP2AP11388 1531 aaKnown RBP27.75■■■□□ 2.03
TGIF1-201ENST00000330513 SMARCA2P51531 1590 aa27.75■■■□□ 2.03
TGIF1-201ENST00000330513 CHIC1Q5VXU3 224 aa27.66■■■□□ 2.02
TGIF1-201ENST00000330513 CC2D2AQ9P2K1 1620 aa27.61■■■□□ 2.01
TGIF1-201ENST00000330513 HMGXB3Q12766 1538 aa27.57■■■□□ 2
TGIF1-201ENST00000330513 BAZ1BQ9UIG0 1483 aaKnown RBP27.57■■■□□ 2
TGIF1-201ENST00000330513 NCAPD3P42695 1498 aa27.56■■■□□ 2
TGIF1-201ENST00000330513 CCDC88BA6NC98 1476 aa27.39■■□□□ 1.98
TGIF1-201ENST00000330513 CFTRP13569 1480 aa26.89■■□□□ 1.9
TGIF1-201ENST00000330513 PRDM2Q13029 1718 aa26.87■■□□□ 1.89
TGIF1-201ENST00000330513 HRCP23327 699 aa26.83■■□□□ 1.89
TGIF1-201ENST00000330513 CADPSQ9ULU8 1353 aa26.78■■□□□ 1.88
TGIF1-201ENST00000330513 ABCC8Q09428 1581 aa26.78■■□□□ 1.88
TGIF1-201ENST00000330513 LOC105371045A0A1W2PR82 267 aa26.69■■□□□ 1.86
TGIF1-201ENST00000330513 LAMC3Q9Y6N6 1575 aa26.69■■□□□ 1.86
TGIF1-201ENST00000330513 NESP48681 1621 aa26.68■■□□□ 1.86
TGIF1-201ENST00000330513 PCGF6Q9BYE7 350 aa26.64■■□□□ 1.86
TGIF1-201ENST00000330513 SYNJ1O43426 1573 aa26.58■■□□□ 1.85
TGIF1-201ENST00000330513 WRNQ14191 1432 aaPredicted RBP eCLIP26.58■■□□□ 1.85
TGIF1-201ENST00000330513 TRIM41Q8WV44 630 aa26.53■■□□□ 1.84
TGIF1-201ENST00000330513 FANCD2Q9BXW9 1451 aa26.52■■□□□ 1.84
TGIF1-201ENST00000330513 BIVM-ERCC5R4GMW8 1640 aa26.49■■□□□ 1.83
TGIF1-201ENST00000330513 TOP2BQ02880 1626 aa26.48■■□□□ 1.83
TGIF1-201ENST00000330513 CUX1P39880 1505 aa26.46■■□□□ 1.83
TGIF1-201ENST00000330513 KIF21AQ7Z4S6 1674 aa26.44■■□□□ 1.82
TGIF1-201ENST00000330513 PDS5BQ9NTI5 1447 aa26.39■■□□□ 1.81
TGIF1-201ENST00000330513 CEP164Q9UPV0 1460 aa26.38■■□□□ 1.81
TGIF1-201ENST00000330513 TRIM26Q12899 539 aaPredicted RBP26.3■■□□□ 1.8
TGIF1-201ENST00000330513 DNMBPQ6XZF7 1577 aa26.3■■□□□ 1.8
TGIF1-201ENST00000330513 URB2Q14146 1524 aaKnown RBP26.25■■□□□ 1.79
TGIF1-201ENST00000330513 TOPBP1Q92547 1522 aa26.24■■□□□ 1.79
TGIF1-201ENST00000330513 FGD5Q6ZNL6 1462 aa26.17■■□□□ 1.78
TGIF1-201ENST00000330513 SOGA1O94964 1423 aa26.17■■□□□ 1.78
TGIF1-201ENST00000330513 MRC2Q9UBG0 1479 aa26.14■■□□□ 1.77
TGIF1-201ENST00000330513 RUSC2Q8N2Y8 1516 aa26.11■■□□□ 1.77
TGIF1-201ENST00000330513 POLA1P09884 1462 aaPredicted RBP26.1■■□□□ 1.77
TGIF1-201ENST00000330513 ERCC6Q03468 1493 aa26.1■■□□□ 1.77
TGIF1-201ENST00000330513 THOC2Q8NI27 1593 aaKnown RBP26.1■■□□□ 1.77
TGIF1-201ENST00000330513 PPARGC1BQ86YN6 1023 aaKnown RBP26.09■■□□□ 1.77
TGIF1-201ENST00000330513 WDR62O43379 1518 aa26.07■■□□□ 1.76
TGIF1-201ENST00000330513 EEA1Q15075 1411 aa26.06■■□□□ 1.76
TGIF1-201ENST00000330513 FAM9AQ8IZU1 332 aaPredicted RBP26.05■■□□□ 1.76
TGIF1-201ENST00000330513 WDR97A6NE52 1622 aa26.02■■□□□ 1.76
TGIF1-201ENST00000330513 RAD54L2Q9Y4B4 1467 aa25.97■■□□□ 1.75
TGIF1-201ENST00000330513 ABCA10Q8WWZ4 1543 aa25.96■■□□□ 1.75
TGIF1-201ENST00000330513 TARBP1Q13395 1621 aaKnown RBP25.93■■□□□ 1.74
TGIF1-201ENST00000330513 CUX2O14529 1486 aa25.92■■□□□ 1.74
TGIF1-201ENST00000330513 KIF27Q86VH2 1401 aa25.89■■□□□ 1.74
TGIF1-201ENST00000330513 KIF21BO75037 1637 aa25.84■■□□□ 1.73
TGIF1-201ENST00000330513 ABCA5Q8WWZ7 1642 aa25.84■■□□□ 1.73
TGIF1-201ENST00000330513 CSRNP3Q8WYN3 585 aa25.84■■□□□ 1.73
TGIF1-201ENST00000330513 ZEB1P37275 1124 aaPredicted RBP25.79■■□□□ 1.72
TGIF1-201ENST00000330513 IFT140Q96RY7 1462 aa25.76■■□□□ 1.71
TGIF1-201ENST00000330513 PRXQ9BXM0 1461 aa25.75■■□□□ 1.71
TGIF1-201ENST00000330513 GOLGA3Q08378 1498 aa25.7■■□□□ 1.71
TGIF1-201ENST00000330513 IGF1RP08069 1367 aa25.7■■□□□ 1.7
TGIF1-201ENST00000330513 ERICH3Q5RHP9 1530 aa25.69■■□□□ 1.7
TGIF1-201ENST00000330513 TDRD9Q8NDG6 1382 aaKnown RBP25.68■■□□□ 1.7
TGIF1-201ENST00000330513 RAPGEF2Q9Y4G8 1499 aa25.68■■□□□ 1.7
TGIF1-201ENST00000330513 EHMT2Q96KQ7 1210 aa25.67■■□□□ 1.7
TGIF1-201ENST00000330513 GAPVD1Q14C86 1478 aa25.66■■□□□ 1.7
TGIF1-201ENST00000330513 PBRM1Q86U86 1689 aa25.66■■□□□ 1.7
TGIF1-201ENST00000330513 ZNF608Q9ULD9 1512 aaPredicted RBP25.66■■□□□ 1.7
TGIF1-201ENST00000330513 CUL7Q14999 1698 aa25.63■■□□□ 1.69
TGIF1-201ENST00000330513 EIF4G3O43432 1585 aaKnown RBP25.63■■□□□ 1.69
TGIF1-201ENST00000330513 AQRO60306 1485 aaKnown RBP eCLIP25.59■■□□□ 1.692e-7■■■■□ 23.3
TGIF1-201ENST00000330513 TNIKQ9UKE5 1360 aa25.54■■□□□ 1.68
TGIF1-201ENST00000330513 CARMIL1Q5VZK9 1371 aa25.54■■□□□ 1.68
TGIF1-201ENST00000330513 ADAMTS12P58397 1594 aa25.51■■□□□ 1.67
TGIF1-201ENST00000330513 GRIN2BQ13224 1484 aa25.51■■□□□ 1.67
TGIF1-201ENST00000330513 CEP162Q5TB80 1403 aa25.43■■□□□ 1.66
TGIF1-201ENST00000330513 UBTFP17480 764 aaKnown RBP25.42■■□□□ 1.66
TGIF1-201ENST00000330513 SNAPC4Q5SXM2 1469 aa25.4■■□□□ 1.66
TGIF1-201ENST00000330513 FHAD1B1AJZ9 1412 aa25.38■■□□□ 1.65
TGIF1-201ENST00000330513 MAGI1Q96QZ7 1491 aaPredicted RBP25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms