RNA–Protein interactions for RNA: ENST00000329734.3

IRX3-201, Transcript of iroquois homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRX3, Length 2,601 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3-201ENST00000329734 NISCHQ9Y2I1 1504 aa44.91■■■■■ 4.78
IRX3-201ENST00000329734 CCDC180Q9P1Z9 1646 aa38.78■■■■□ 3.8
IRX3-201ENST00000329734 ZCCHC6Q5VYS8 1495 aaKnown RBP37.72■■■■□ 3.63
IRX3-201ENST00000329734 DCAF8L2P0C7V8 631 aa37.65■■■■□ 3.62
IRX3-201ENST00000329734 SHROOM4Q9ULL8 1493 aa37.43■■■■□ 3.58
IRX3-201ENST00000329734 ABCC9O60706 1549 aa37.07■■■■□ 3.52
IRX3-201ENST00000329734 DCAF1Q9Y4B6 1507 aa36.8■■■■□ 3.48
IRX3-201ENST00000329734 MYO15BQ96JP2 1530 aa36.2■■■■□ 3.39
IRX3-201ENST00000329734 SCRIBQ14160 1630 aa36.19■■■■□ 3.38
IRX3-201ENST00000329734 NACADO15069 1562 aa36.13■■■■□ 3.37
IRX3-201ENST00000329734 SUPT5HO00267 1087 aaKnown RBP36.07■■■■□ 3.36
IRX3-201ENST00000329734 RB1CC1Q8TDY2 1594 aa35.85■■■■□ 3.33
IRX3-201ENST00000329734 PELP1Q8IZL8 1130 aaKnown RBP35.4■■■■□ 3.26
IRX3-201ENST00000329734 UNC13AQ9UPW8 1703 aa35.37■■■■□ 3.25
IRX3-201ENST00000329734 PABPN1Q86U42 306 aaKnown RBP eCLIP35.19■■■■□ 3.22
IRX3-201ENST00000329734 CECR2Q9BXF3 1484 aa35.16■■■■□ 3.22
IRX3-201ENST00000329734 RSF1Q96T23 1441 aaPredicted RBP35.05■■■■□ 3.2
IRX3-201ENST00000329734 BICRAQ9NZM4 1560 aa34.94■■■■□ 3.18
IRX3-201ENST00000329734 MROH2BQ7Z745 1585 aa34.88■■■■□ 3.17
IRX3-201ENST00000329734 MYT1Q01538 1121 aa34.83■■■■□ 3.17
IRX3-201ENST00000329734 WIZO95785 1651 aa34.66■■■■□ 3.14
IRX3-201ENST00000329734 BAZ1AQ9NRL2 1556 aaPredicted RBP34.57■■■■□ 3.13
IRX3-201ENST00000329734 SMARCA4P51532 1647 aa34.49■■■■□ 3.11
IRX3-201ENST00000329734 CHIC1Q5VXU3 224 aa34.42■■■■□ 3.1
IRX3-201ENST00000329734 TOP2AP11388 1531 aaKnown RBP34.03■■■■□ 3.04
IRX3-201ENST00000329734 ATAD2BQ9ULI0 1458 aa33.89■■■■□ 3.02
IRX3-201ENST00000329734 CCDC88BA6NC98 1476 aa33.88■■■■□ 3.01
IRX3-201ENST00000329734 EIF4G1Q04637 1599 aaKnown RBP33.85■■■■□ 3.01
IRX3-201ENST00000329734 PEG3Q9GZU2 1588 aa33.84■■■■□ 3.01
IRX3-201ENST00000329734 SMARCA2P51531 1590 aa33.83■■■■□ 3.01
IRX3-201ENST00000329734 BAZ1BQ9UIG0 1483 aaKnown RBP33.73■■■□□ 2.99
IRX3-201ENST00000329734 TRIM41Q8WV44 630 aa33.65■■■□□ 2.98
IRX3-201ENST00000329734 TTBK1Q5TCY1 1321 aaPredicted RBP33.55■■■□□ 2.96
IRX3-201ENST00000329734 NCAPD3P42695 1498 aa33.43■■■□□ 2.94
IRX3-201ENST00000329734 ABCC8Q09428 1581 aa33.43■■■□□ 2.94
IRX3-201ENST00000329734 LOC105371045A0A1W2PR82 267 aa33.4■■■□□ 2.94
IRX3-201ENST00000329734 FAM9AQ8IZU1 332 aaPredicted RBP33.4■■■□□ 2.94
IRX3-201ENST00000329734 CC2D2AQ9P2K1 1620 aa33.37■■■□□ 2.93
IRX3-201ENST00000329734 HMGXB3Q12766 1538 aa33.33■■■□□ 2.93
IRX3-201ENST00000329734 EHMT2Q96KQ7 1210 aa33.2■■■□□ 2.91
IRX3-201ENST00000329734 HRCP23327 699 aa33.14■■■□□ 2.89
IRX3-201ENST00000329734 PCGF6Q9BYE7 350 aa33.03■■■□□ 2.88
IRX3-201ENST00000329734 DNAJC5BQ9UF47 199 aa32.98■■■□□ 2.87
IRX3-201ENST00000329734 PRKCSHP14314 528 aaPredicted RBP32.97■■■□□ 2.87
IRX3-201ENST00000329734 WRNQ14191 1432 aaPredicted RBP eCLIP32.95■■■□□ 2.87
IRX3-201ENST00000329734 SYNJ1O43426 1573 aa32.88■■■□□ 2.85
IRX3-201ENST00000329734 PPARGC1BQ86YN6 1023 aaKnown RBP32.84■■■□□ 2.85
IRX3-201ENST00000329734 SOGA1O94964 1423 aa32.82■■■□□ 2.85
IRX3-201ENST00000329734 CFTRP13569 1480 aa32.82■■■□□ 2.84
IRX3-201ENST00000329734 RUSC2Q8N2Y8 1516 aa32.77■■■□□ 2.84
IRX3-201ENST00000329734 CADPSQ9ULU8 1353 aa32.71■■■□□ 2.83
IRX3-201ENST00000329734 NESP48681 1621 aa32.65■■■□□ 2.82
IRX3-201ENST00000329734 CUX1P39880 1505 aa32.55■■■□□ 2.8
IRX3-201ENST00000329734 TOP2BQ02880 1626 aa32.55■■■□□ 2.8
IRX3-201ENST00000329734 PRDM2Q13029 1718 aa32.53■■■□□ 2.8
IRX3-201ENST00000329734 CSRNP3Q8WYN3 585 aa32.47■■■□□ 2.79
IRX3-201ENST00000329734 BIVM-ERCC5R4GMW8 1640 aa32.46■■■□□ 2.79
IRX3-201ENST00000329734 FANCD2Q9BXW9 1451 aa32.4■■■□□ 2.78
IRX3-201ENST00000329734 EEA1Q15075 1411 aa32.31■■■□□ 2.76
IRX3-201ENST00000329734 SCAF1Q9H7N4 1312 aaKnown RBP32.31■■■□□ 2.76
IRX3-201ENST00000329734 UBTFP17480 764 aaKnown RBP32.26■■■□□ 2.75
IRX3-201ENST00000329734 LAMC3Q9Y6N6 1575 aa32.22■■■□□ 2.75
IRX3-201ENST00000329734 FGD5Q6ZNL6 1462 aa32.17■■■□□ 2.74
IRX3-201ENST00000329734 APLP2Q06481 763 aa32.16■■■□□ 2.74
IRX3-201ENST00000329734 ERICH6Q7L0X2 663 aa32.13■■■□□ 2.73
IRX3-201ENST00000329734 BCL11AQ9H165 835 aa32.12■■■□□ 2.73
IRX3-201ENST00000329734 CEP164Q9UPV0 1460 aa32.12■■■□□ 2.73
IRX3-201ENST00000329734 GOLGA3Q08378 1498 aa32.09■■■□□ 2.73
IRX3-201ENST00000329734 KIF21AQ7Z4S6 1674 aa32.09■■■□□ 2.73
IRX3-201ENST00000329734 RAPGEF2Q9Y4G8 1499 aa32.08■■■□□ 2.73
IRX3-201ENST00000329734 TOPBP1Q92547 1522 aa32.06■■■□□ 2.72
IRX3-201ENST00000329734 RANGAP1P46060 587 aaPredicted RBP32.05■■■□□ 2.72
IRX3-201ENST00000329734 CUX2O14529 1486 aa32.04■■■□□ 2.72
IRX3-201ENST00000329734 PDS5BQ9NTI5 1447 aa32.04■■■□□ 2.72
IRX3-201ENST00000329734 RAD54L2Q9Y4B4 1467 aa32.03■■■□□ 2.72
IRX3-201ENST00000329734 URB2Q14146 1524 aaKnown RBP32.03■■■□□ 2.72
IRX3-201ENST00000329734 TNIKQ9UKE5 1360 aa32.03■■■□□ 2.72
IRX3-201ENST00000329734 KIF27Q86VH2 1401 aa32.02■■■□□ 2.72
IRX3-201ENST00000329734 DNMBPQ6XZF7 1577 aa32.02■■■□□ 2.72
IRX3-201ENST00000329734 CEP162Q5TB80 1403 aa32.02■■■□□ 2.72
IRX3-201ENST00000329734 KIF21BO75037 1637 aa32■■■□□ 2.71
IRX3-201ENST00000329734 POLA1P09884 1462 aaPredicted RBP31.96■■■□□ 2.71
IRX3-201ENST00000329734 SLC24A1O60721 1099 aa31.89■■■□□ 2.7
IRX3-201ENST00000329734 TRIM26Q12899 539 aaPredicted RBP31.86■■■□□ 2.69
IRX3-201ENST00000329734 PRXQ9BXM0 1461 aa31.86■■■□□ 2.69
IRX3-201ENST00000329734 IGF1RP08069 1367 aa31.83■■■□□ 2.69
IRX3-201ENST00000329734 TDRD9Q8NDG6 1382 aaKnown RBP31.73■■■□□ 2.67
IRX3-201ENST00000329734 ABCA10Q8WWZ4 1543 aa31.73■■■□□ 2.67
IRX3-201ENST00000329734 CLIP1P30622 1438 aa31.7■■■□□ 2.66
IRX3-201ENST00000329734 ERICH3Q5RHP9 1530 aa31.7■■■□□ 2.66
IRX3-201ENST00000329734 CARMIL1Q5VZK9 1371 aa31.67■■■□□ 2.66
IRX3-201ENST00000329734 MRC2Q9UBG0 1479 aa31.64■■■□□ 2.66
IRX3-201ENST00000329734 ERCC6Q03468 1493 aa31.62■■■□□ 2.65
IRX3-201ENST00000329734 WDR97A6NE52 1622 aa31.59■■■□□ 2.65
IRX3-201ENST00000329734 TARBP1Q13395 1621 aaKnown RBP31.52■■■□□ 2.64
IRX3-201ENST00000329734 GAPVD1Q14C86 1478 aa31.48■■■□□ 2.63
IRX3-201ENST00000329734 AQRO60306 1485 aaKnown RBP eCLIP31.47■■■□□ 2.632e-6■■■■■ 28.8
IRX3-201ENST00000329734 ABCA5Q8WWZ7 1642 aa31.46■■■□□ 2.63
IRX3-201ENST00000329734 WDR62O43379 1518 aa31.42■■■□□ 2.62
IRX3-201ENST00000329734 ZNF608Q9ULD9 1512 aaPredicted RBP31.39■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms