RNA–Protein interactions for RNA: ENST00000328945.6

SDR42E1-201, Transcript of short chain dehydrogenase/reductase family 42E, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDR42E1, Length 11,566 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR42E1-201ENST00000328945 DCAF8L2P0C7V8 631 aa9.18□□□□□ -0.94
SDR42E1-201ENST00000328945 PELP1Q8IZL8 1130 aaKnown RBP8.87□□□□□ -0.99
SDR42E1-201ENST00000328945 MYT1Q01538 1121 aa8.86□□□□□ -0.99
SDR42E1-201ENST00000328945 NISCHQ9Y2I1 1504 aa8.71□□□□□ -1.02
SDR42E1-201ENST00000328945 CENPBP07199 599 aaPredicted RBP8.44□□□□□ -1.06
SDR42E1-201ENST00000328945 EHMT2Q96KQ7 1210 aa8.41□□□□□ -1.06
SDR42E1-201ENST00000328945 SUPT5HO00267 1087 aaKnown RBP8.38□□□□□ -1.07
SDR42E1-201ENST00000328945 ERICH6Q7L0X2 663 aa8.36□□□□□ -1.07
SDR42E1-201ENST00000328945 CCER1Q8TC90 406 aaPredicted RBP8.34□□□□□ -1.07
SDR42E1-201ENST00000328945 ZEB1P37275 1124 aaPredicted RBP8.32□□□□□ -1.08
SDR42E1-201ENST00000328945 SHROOM4Q9ULL8 1493 aa8.32□□□□□ -1.08
SDR42E1-201ENST00000328945 PCGF6Q9BYE7 350 aa8.26□□□□□ -1.09
SDR42E1-201ENST00000328945 FAM9AQ8IZU1 332 aaPredicted RBP8.23□□□□□ -1.09
SDR42E1-201ENST00000328945 TTBK1Q5TCY1 1321 aaPredicted RBP8.2□□□□□ -1.1
SDR42E1-201ENST00000328945 APLP2Q06481 763 aa8.15□□□□□ -1.11
SDR42E1-201ENST00000328945 NEFLP07196 543 aa8.11□□□□□ -1.11
SDR42E1-201ENST00000328945 HRCP23327 699 aa8.1□□□□□ -1.11
SDR42E1-201ENST00000328945 RANGAP1P46060 587 aaPredicted RBP8.08□□□□□ -1.12
SDR42E1-201ENST00000328945 YTHDC1Q96MU7 727 aaKnown RBP8.04□□□□□ -1.12
SDR42E1-201ENST00000328945 ATP1B4Q9UN42 357 aaPredicted RBP8.03□□□□□ -1.12
SDR42E1-201ENST00000328945 RTL5Q5HYW3 569 aaPredicted RBP7.89□□□□□ -1.15
SDR42E1-201ENST00000328945 TRIM26Q12899 539 aaPredicted RBP7.89□□□□□ -1.15
SDR42E1-201ENST00000328945 MYT1LQ9UL68 1186 aa7.89□□□□□ -1.15
SDR42E1-201ENST00000328945 DAXXQ9UER7 740 aaPredicted RBP7.87□□□□□ -1.15
SDR42E1-201ENST00000328945 CHIC1Q5VXU3 224 aa7.82□□□□□ -1.16
SDR42E1-201ENST00000328945 UBTFP17480 764 aaKnown RBP7.8□□□□□ -1.16
SDR42E1-201ENST00000328945 PPARGC1BQ86YN6 1023 aaKnown RBP7.78□□□□□ -1.16
SDR42E1-201ENST00000328945 GTF3C3Q9Y5Q9 886 aa7.77□□□□□ -1.17
SDR42E1-201ENST00000328945 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.75□□□□□ -1.17
SDR42E1-201ENST00000328945 HNRNPUL2Q1KMD3 747 aaKnown RBP7.75□□□□□ -1.17
SDR42E1-201ENST00000328945 DIEXFQ68CQ4 756 aaKnown RBP7.74□□□□□ -1.17
SDR42E1-201ENST00000328945 TRIM41Q8WV44 630 aa7.72□□□□□ -1.17
SDR42E1-201ENST00000328945 ZNF316A6NFI3 1004 aaPredicted RBP7.72□□□□□ -1.17
SDR42E1-201ENST00000328945 GLIPR1L2Q4G1C9 344 aa7.7□□□□□ -1.18
SDR42E1-201ENST00000328945 ACIN1Q9UKV3 1341 aaKnown RBP7.7□□□□□ -1.18
SDR42E1-201ENST00000328945 CLSPNQ9HAW4 1339 aa7.69□□□□□ -1.18
SDR42E1-201ENST00000328945 POLR3GLQ9BT43 218 aa7.68□□□□□ -1.18
SDR42E1-201ENST00000328945 SLC4A1APQ9BWU0 796 aaKnown RBP7.65□□□□□ -1.18
SDR42E1-201ENST00000328945 CCDC180Q9P1Z9 1646 aa7.62□□□□□ -1.19
SDR42E1-201ENST00000328945 ITGAEP38570 1179 aa7.61□□□□□ -1.19
SDR42E1-201ENST00000328945 CDK11AQ9UQ88 783 aaPredicted RBP7.6□□□□□ -1.19
SDR42E1-201ENST00000328945 EIF5BO60841 1220 aaKnown RBP7.59□□□□□ -1.19
SDR42E1-201ENST00000328945 CNGB1Q14028 1251 aaPredicted RBP7.59□□□□□ -1.19
SDR42E1-201ENST00000328945 BCANQ96GW7 911 aa7.57□□□□□ -1.2
SDR42E1-201ENST00000328945 ANP32AP39687 249 aaKnown RBP7.55□□□□□ -1.2
SDR42E1-201ENST00000328945 SCAF1Q9H7N4 1312 aaKnown RBP7.53□□□□□ -1.2
SDR42E1-201ENST00000328945 PABPN1Q86U42 306 aaKnown RBP eCLIP7.48□□□□□ -1.21
SDR42E1-201ENST00000328945 PLPPR3Q6T4P5 718 aa7.47□□□□□ -1.21
SDR42E1-201ENST00000328945 FBLN2P98095 1184 aa7.47□□□□□ -1.21
SDR42E1-201ENST00000328945 ANP32EQ9BTT0 268 aa7.47□□□□□ -1.21
SDR42E1-201ENST00000328945 LOC105371045A0A1W2PR82 267 aa7.46□□□□□ -1.22
SDR42E1-201ENST00000328945 BCL11AQ9H165 835 aa7.46□□□□□ -1.22
SDR42E1-201ENST00000328945 ABCC9O60706 1549 aa7.45□□□□□ -1.22
SDR42E1-201ENST00000328945 SLC24A1O60721 1099 aa7.43□□□□□ -1.22
SDR42E1-201ENST00000328945 NEUROD1Q13562 356 aa7.43□□□□□ -1.22
SDR42E1-201ENST00000328945 DCAF1Q9Y4B6 1507 aa7.42□□□□□ -1.22
SDR42E1-201ENST00000328945 ANP32CO43423 234 aa7.42□□□□□ -1.22
SDR42E1-201ENST00000328945 ANP32BQ92688 251 aaKnown RBP7.41□□□□□ -1.22
SDR42E1-201ENST00000328945 FAM50AQ14320 339 aaKnown RBP7.37□□□□□ -1.23
SDR42E1-201ENST00000328945 NBR1Q14596 966 aa7.37□□□□□ -1.23
SDR42E1-201ENST00000328945 FKBP8Q14318 412 aa7.36□□□□□ -1.23
SDR42E1-201ENST00000328945 KAT6BQ8WYB5 2073 aa7.36□□□□□ -1.23
SDR42E1-201ENST00000328945 TRIM52Q96A61 297 aa7.35□□□□□ -1.23
SDR42E1-201ENST00000328945 ZBTB47Q9UFB7 747 aaPredicted RBP7.35□□□□□ -1.23
SDR42E1-201ENST00000328945 NPM2Q86SE8 214 aaKnown RBP7.34□□□□□ -1.23
SDR42E1-201ENST00000328945 ZCCHC6Q5VYS8 1495 aaKnown RBP7.34□□□□□ -1.23
SDR42E1-201ENST00000328945 ZNF326Q5BKZ1 582 aaKnown RBP7.34□□□□□ -1.23
SDR42E1-201ENST00000328945 ESF1Q9H501 851 aaKnown RBP7.33□□□□□ -1.24
SDR42E1-201ENST00000328945 ARID3CA6NKF2 412 aa7.33□□□□□ -1.24
SDR42E1-201ENST00000328945 TNNT2P45379 298 aaPredicted RBP7.31□□□□□ -1.24
SDR42E1-201ENST00000328945 ERICH6BQ5W0A0 696 aa7.28□□□□□ -1.24
SDR42E1-201ENST00000328945 NEFMP07197 916 aa7.27□□□□□ -1.25
SDR42E1-201ENST00000328945 CANXP27824 592 aaKnown RBP7.26□□□□□ -1.25
SDR42E1-201ENST00000328945 UPF2Q9HAU5 1272 aaKnown RBP7.26□□□□□ -1.25
SDR42E1-201ENST00000328945 STAG3Q9UJ98 1225 aa7.26□□□□□ -1.25
SDR42E1-201ENST00000328945 A0A0G2JS52 829 aa7.26□□□□□ -1.25
SDR42E1-201ENST00000328945 MYO15BQ96JP2 1530 aa7.25□□□□□ -1.25
SDR42E1-201ENST00000328945 HSP90AA1P07900 732 aaKnown RBP7.23□□□□□ -1.25
SDR42E1-201ENST00000328945 DDRGK1Q96HY6 314 aa7.22□□□□□ -1.25
SDR42E1-201ENST00000328945 CCDC136Q96JN2 1154 aa7.22□□□□□ -1.25
SDR42E1-201ENST00000328945 ZNF777Q9ULD5 760 aaPredicted RBP7.22□□□□□ -1.25
SDR42E1-201ENST00000328945 P3H3Q8IVL6 736 aa7.21□□□□□ -1.25
SDR42E1-201ENST00000328945 CHGAP10645 457 aaKnown RBP7.2□□□□□ -1.26
SDR42E1-201ENST00000328945 PLEKHG5O94827 1062 aa7.2□□□□□ -1.26
SDR42E1-201ENST00000328945 HNRNPUQ00839 825 aaKnown RBP eCLIP7.2□□□□□ -1.26
SDR42E1-201ENST00000328945 NAP1L5Q96NT1 182 aaPredicted RBP7.2□□□□□ -1.26
SDR42E1-201ENST00000328945 TRIM44Q96DX7 344 aaPredicted RBP7.2□□□□□ -1.26
SDR42E1-201ENST00000328945 CDK11BP21127 795 aaKnown RBP7.2□□□□□ -1.26
SDR42E1-201ENST00000328945 NPM1P06748 294 aaKnown RBP eCLIP7.19□□□□□ -1.26
SDR42E1-201ENST00000328945 PPM1GO15355 546 aaPredicted RBP7.19□□□□□ -1.26
SDR42E1-201ENST00000328945 NOP58Q9Y2X3 529 aaKnown RBP7.19□□□□□ -1.26
SDR42E1-201ENST00000328945 NCLP19338 710 aaKnown RBP7.19□□□□□ -1.26
SDR42E1-201ENST00000328945 DEKP35659 375 aaKnown RBP7.19□□□□□ -1.26
SDR42E1-201ENST00000328945 RTN4Q9NQC3 1192 aaKnown RBP7.18□□□□□ -1.26
SDR42E1-201ENST00000328945 ARXQ96QS3 562 aa7.18□□□□□ -1.26
SDR42E1-201ENST00000328945 MIER1Q8N108 512 aa7.18□□□□□ -1.26
SDR42E1-201ENST00000328945 BECN1Q14457 450 aa7.16□□□□□ -1.26
SDR42E1-201ENST00000328945 SENP3Q9H4L4 574 aaPredicted RBP7.16□□□□□ -1.26
SDR42E1-201ENST00000328945 SCRIBQ14160 1630 aa7.15□□□□□ -1.26
SDR42E1-201ENST00000328945 SUPT16HQ9Y5B9 1047 aaKnown RBP7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 218.4 ms