RNA–Protein interactions for RNA: ENST00000328528.10

MITF-203, Transcript of melanogenesis associated transcription factor, humanhuman

TSL 5 BASIC

Gene MITF, Length 4,680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MITF-203ENST00000328528 DCAF8L2P0C7V8 631 aa13.74□□□□□ -0.21
MITF-203ENST00000328528 NISCHQ9Y2I1 1504 aa13.32□□□□□ -0.28
MITF-203ENST00000328528 FAM9AQ8IZU1 332 aaPredicted RBP12.95□□□□□ -0.34
MITF-203ENST00000328528 PELP1Q8IZL8 1130 aaKnown RBP12.91□□□□□ -0.34
MITF-203ENST00000328528 SUPT5HO00267 1087 aaKnown RBP12.84□□□□□ -0.35
MITF-203ENST00000328528 APLP2Q06481 763 aa12.77□□□□□ -0.36
MITF-203ENST00000328528 MYT1Q01538 1121 aa12.63□□□□□ -0.39
MITF-203ENST00000328528 PCGF6Q9BYE7 350 aa12.58□□□□□ -0.4
MITF-203ENST00000328528 SHROOM4Q9ULL8 1493 aa12.53□□□□□ -0.4
MITF-203ENST00000328528 HRCP23327 699 aa12.52□□□□□ -0.41
MITF-203ENST00000328528 ZEB1P37275 1124 aaPredicted RBP12.45□□□□□ -0.42
MITF-203ENST00000328528 CCER1Q8TC90 406 aaPredicted RBP12.33□□□□□ -0.44
MITF-203ENST00000328528 CENPBP07199 599 aaPredicted RBP12.33□□□□□ -0.44
MITF-203ENST00000328528 EHMT2Q96KQ7 1210 aa12.24□□□□□ -0.45
MITF-203ENST00000328528 TRIM26Q12899 539 aaPredicted RBP12.14□□□□□ -0.47
MITF-203ENST00000328528 ERICH6Q7L0X2 663 aa12.12□□□□□ -0.47
MITF-203ENST00000328528 PPARGC1BQ86YN6 1023 aaKnown RBP12.09□□□□□ -0.47
MITF-203ENST00000328528 TRIM41Q8WV44 630 aa12.08□□□□□ -0.48
MITF-203ENST00000328528 ATP1B4Q9UN42 357 aaPredicted RBP12.05□□□□□ -0.48
MITF-203ENST00000328528 NEFLP07196 543 aa12.01□□□□□ -0.49
MITF-203ENST00000328528 UBTFP17480 764 aaKnown RBP12.01□□□□□ -0.49
MITF-203ENST00000328528 CHIC1Q5VXU3 224 aa12□□□□□ -0.49
MITF-203ENST00000328528 RANGAP1P46060 587 aaPredicted RBP11.89□□□□□ -0.51
MITF-203ENST00000328528 TTBK1Q5TCY1 1321 aaPredicted RBP11.87□□□□□ -0.51
MITF-203ENST00000328528 YTHDC1Q96MU7 727 aaKnown RBP11.82□□□□□ -0.52
MITF-203ENST00000328528 MYT1LQ9UL68 1186 aa11.82□□□□□ -0.52
MITF-203ENST00000328528 LOC105371045A0A1W2PR82 267 aa11.81□□□□□ -0.52
MITF-203ENST00000328528 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.74□□□□□ -0.53
MITF-203ENST00000328528 HNRNPUL2Q1KMD3 747 aaKnown RBP11.74□□□□□ -0.53
MITF-203ENST00000328528 DAXXQ9UER7 740 aaPredicted RBP11.74□□□□□ -0.53
MITF-203ENST00000328528 GTF3C3Q9Y5Q9 886 aa11.73□□□□□ -0.53
MITF-203ENST00000328528 DIEXFQ68CQ4 756 aaKnown RBP11.73□□□□□ -0.53
MITF-203ENST00000328528 ACIN1Q9UKV3 1341 aaKnown RBP11.73□□□□□ -0.53
MITF-203ENST00000328528 DCAF1Q9Y4B6 1507 aa11.68□□□□□ -0.54
MITF-203ENST00000328528 SCAF1Q9H7N4 1312 aaKnown RBP11.63□□□□□ -0.55
MITF-203ENST00000328528 POLR3GLQ9BT43 218 aa11.51□□□□□ -0.57
MITF-203ENST00000328528 NEUROD1Q13562 356 aa11.47□□□□□ -0.57
MITF-203ENST00000328528 ITGAEP38570 1179 aa11.47□□□□□ -0.57
MITF-203ENST00000328528 ZNF316A6NFI3 1004 aaPredicted RBP11.46□□□□□ -0.58
MITF-203ENST00000328528 SLC4A1APQ9BWU0 796 aaKnown RBP11.45□□□□□ -0.58
MITF-203ENST00000328528 CLSPNQ9HAW4 1339 aa11.45□□□□□ -0.58
MITF-203ENST00000328528 ZBTB47Q9UFB7 747 aaPredicted RBP11.4□□□□□ -0.58
MITF-203ENST00000328528 MYO15BQ96JP2 1530 aa11.4□□□□□ -0.58
MITF-203ENST00000328528 CCDC180Q9P1Z9 1646 aa11.39□□□□□ -0.59
MITF-203ENST00000328528 NEFMP07197 916 aa11.35□□□□□ -0.59
MITF-203ENST00000328528 RTL5Q5HYW3 569 aaPredicted RBP11.34□□□□□ -0.59
MITF-203ENST00000328528 TRIM52Q96A61 297 aa11.32□□□□□ -0.6
MITF-203ENST00000328528 FAM50AQ14320 339 aaKnown RBP11.29□□□□□ -0.6
MITF-203ENST00000328528 CDK11AQ9UQ88 783 aaPredicted RBP11.27□□□□□ -0.6
MITF-203ENST00000328528 ESF1Q9H501 851 aaKnown RBP11.23□□□□□ -0.61
MITF-203ENST00000328528 BCANQ96GW7 911 aa11.22□□□□□ -0.61
MITF-203ENST00000328528 ZCCHC6Q5VYS8 1495 aaKnown RBP11.2□□□□□ -0.62
MITF-203ENST00000328528 ANP32CO43423 234 aa11.19□□□□□ -0.62
MITF-203ENST00000328528 FBLN2P98095 1184 aa11.18□□□□□ -0.62
MITF-203ENST00000328528 ANP32EQ9BTT0 268 aa11.17□□□□□ -0.62
MITF-203ENST00000328528 CNGB1Q14028 1251 aaPredicted RBP11.17□□□□□ -0.62
MITF-203ENST00000328528 NPM1P06748 294 aaKnown RBP eCLIP11.16□□□□□ -0.62
MITF-203ENST00000328528 ABCC9O60706 1549 aa11.14□□□□□ -0.63
MITF-203ENST00000328528 CANXP27824 592 aaKnown RBP11.13□□□□□ -0.63
MITF-203ENST00000328528 PABPN1Q86U42 306 aaKnown RBP eCLIP11.12□□□□□ -0.63
MITF-203ENST00000328528 MIER1Q8N108 512 aa11.12□□□□□ -0.63
MITF-203ENST00000328528 ZNF326Q5BKZ1 582 aaKnown RBP11.08□□□□□ -0.64
MITF-203ENST00000328528 FKBP8Q14318 412 aa11.08□□□□□ -0.64
MITF-203ENST00000328528 SLC24A1O60721 1099 aa11.07□□□□□ -0.64
MITF-203ENST00000328528 BCL11AQ9H165 835 aa11.05□□□□□ -0.64
MITF-203ENST00000328528 STAG3Q9UJ98 1225 aa11.04□□□□□ -0.64
MITF-203ENST00000328528 CSRNP3Q8WYN3 585 aa11.02□□□□□ -0.65
MITF-203ENST00000328528 ANP32BQ92688 251 aaKnown RBP10.97□□□□□ -0.65
MITF-203ENST00000328528 ANP32AP39687 249 aaKnown RBP10.97□□□□□ -0.65
MITF-203ENST00000328528 SUPT16HQ9Y5B9 1047 aaKnown RBP10.96□□□□□ -0.65
MITF-203ENST00000328528 UPF2Q9HAU5 1272 aaKnown RBP10.95□□□□□ -0.66
MITF-203ENST00000328528 ZNF777Q9ULD5 760 aaPredicted RBP10.95□□□□□ -0.66
MITF-203ENST00000328528 NPM2Q86SE8 214 aaKnown RBP10.91□□□□□ -0.66
MITF-203ENST00000328528 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.91□□□□□ -0.66
MITF-203ENST00000328528 TONSLQ96HA7 1378 aa10.91□□□□□ -0.66
MITF-203ENST00000328528 TSPY4P0CV99 314 aa10.91□□□□□ -0.66
MITF-203ENST00000328528 TSPY10P0CW01 314 aa10.91□□□□□ -0.66
MITF-203ENST00000328528 CHGAP10645 457 aaKnown RBP10.9□□□□□ -0.67
MITF-203ENST00000328528 HSP90AA1P07900 732 aaKnown RBP10.87□□□□□ -0.67
MITF-203ENST00000328528 DDX10Q13206 875 aaKnown RBP10.86□□□□□ -0.67
MITF-203ENST00000328528 P3H3Q8IVL6 736 aa10.85□□□□□ -0.67
MITF-203ENST00000328528 EIF5BO60841 1220 aaKnown RBP10.84□□□□□ -0.67
MITF-203ENST00000328528 HNRNPUQ00839 825 aaKnown RBP eCLIP10.83□□□□□ -0.68
MITF-203ENST00000328528 CEP162Q5TB80 1403 aa10.83□□□□□ -0.68
MITF-203ENST00000328528 TSHZ2Q9NRE2 1034 aa10.82□□□□□ -0.68
MITF-203ENST00000328528 NBR1Q14596 966 aa10.81□□□□□ -0.68
MITF-203ENST00000328528 CDK11BP21127 795 aaKnown RBP10.81□□□□□ -0.68
MITF-203ENST00000328528 EEA1Q15075 1411 aa10.79□□□□□ -0.68
MITF-203ENST00000328528 RSF1Q96T23 1441 aaPredicted RBP10.79□□□□□ -0.68
MITF-203ENST00000328528 MYH16Q9H6N6 1097 aa10.79□□□□□ -0.68
MITF-203ENST00000328528 WDR43Q15061 677 aaKnown RBP eCLIP10.79□□□□□ -0.68
MITF-203ENST00000328528 GLIPR1L2Q4G1C9 344 aa10.79□□□□□ -0.68
MITF-203ENST00000328528 ARID3CA6NKF2 412 aa10.78□□□□□ -0.68
MITF-203ENST00000328528 CHMP7Q8WUX9 453 aaPredicted RBP10.78□□□□□ -0.68
MITF-203ENST00000328528 RBM19Q9Y4C8 960 aaKnown RBP10.78□□□□□ -0.68
MITF-203ENST00000328528 TNIKQ9UKE5 1360 aa10.77□□□□□ -0.69
MITF-203ENST00000328528 CDCA8Q53HL2 280 aa10.77□□□□□ -0.69
MITF-203ENST00000328528 TMC1Q8TDI8 760 aa10.76□□□□□ -0.69
MITF-203ENST00000328528 MTUS2Q5JR59 1369 aa10.75□□□□□ -0.69
MITF-203ENST00000328528 PPP1R15AO75807 674 aaPredicted RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms