RNA–Protein interactions for RNA: ENST00000328434.7

COA3-201, Transcript of cytochrome c oxidase assembly factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COA3, Length 771 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COA3-201ENST00000328434 NISCHQ9Y2I1 1504 aa28.08■■■□□ 2.08
COA3-201ENST00000328434 CCDC180Q9P1Z9 1646 aa25.1■■□□□ 1.61
COA3-201ENST00000328434 ABCC9O60706 1549 aa25.08■■□□□ 1.61
COA3-201ENST00000328434 RB1CC1Q8TDY2 1594 aa23.93■■□□□ 1.42
COA3-201ENST00000328434 NACADO15069 1562 aa23.8■■□□□ 1.4
COA3-201ENST00000328434 DCAF8L2P0C7V8 631 aa23.78■■□□□ 1.4
COA3-201ENST00000328434 MYO15BQ96JP2 1530 aa23.52■■□□□ 1.36
COA3-201ENST00000328434 DNAJC5BQ9UF47 199 aa23.5■■□□□ 1.35
COA3-201ENST00000328434 PABPN1Q86U42 306 aaKnown RBP eCLIP23.42■■□□□ 1.34
COA3-201ENST00000328434 ZCCHC6Q5VYS8 1495 aaKnown RBP23.25■■□□□ 1.31
COA3-201ENST00000328434 DCAF1Q9Y4B6 1507 aa23.23■■□□□ 1.31
COA3-201ENST00000328434 UNC13AQ9UPW8 1703 aa23.19■■□□□ 1.3
COA3-201ENST00000328434 BICRAQ9NZM4 1560 aa23.15■■□□□ 1.3
COA3-201ENST00000328434 SHROOM4Q9ULL8 1493 aa22.98■■□□□ 1.27
COA3-201ENST00000328434 SCRIBQ14160 1630 aa22.86■■□□□ 1.25
COA3-201ENST00000328434 CC2D2AQ9P2K1 1620 aa22.64■■□□□ 1.21
COA3-201ENST00000328434 CECR2Q9BXF3 1484 aa22.63■■□□□ 1.21
COA3-201ENST00000328434 EIF4G1Q04637 1599 aaKnown RBP22.62■■□□□ 1.21
COA3-201ENST00000328434 NCAPD3P42695 1498 aa22■■□□□ 1.11
COA3-201ENST00000328434 ATAD2BQ9ULI0 1458 aa21.9■■□□□ 1.1
COA3-201ENST00000328434 SMARCA2P51531 1590 aa21.86■■□□□ 1.09
COA3-201ENST00000328434 SMARCA4P51532 1647 aa21.84■■□□□ 1.09
COA3-201ENST00000328434 BAZ1AQ9NRL2 1556 aaPredicted RBP21.8■■□□□ 1.08
COA3-201ENST00000328434 HMGXB3Q12766 1538 aa21.79■■□□□ 1.08
COA3-201ENST00000328434 ERCC6Q03468 1493 aa21.71■■□□□ 1.07
COA3-201ENST00000328434 BAZ1BQ9UIG0 1483 aaKnown RBP21.71■■□□□ 1.07
COA3-201ENST00000328434 PEG3Q9GZU2 1588 aa21.66■■□□□ 1.06
COA3-201ENST00000328434 CUX2O14529 1486 aa21.64■■□□□ 1.06
COA3-201ENST00000328434 DNAJC5Q9H3Z4 198 aa21.62■■□□□ 1.05
COA3-201ENST00000328434 MROH2BQ7Z745 1585 aa21.6■■□□□ 1.05
COA3-201ENST00000328434 NESP48681 1621 aa21.53■■□□□ 1.04
COA3-201ENST00000328434 LAMC3Q9Y6N6 1575 aa21.45■■□□□ 1.02
COA3-201ENST00000328434 PDS5BQ9NTI5 1447 aa21.41■■□□□ 1.02
COA3-201ENST00000328434 CADPSQ9ULU8 1353 aa21.36■■□□□ 1.01
COA3-201ENST00000328434 WIZO95785 1651 aa21.29■■□□□ 1
COA3-201ENST00000328434 THOC2Q8NI27 1593 aaKnown RBP21.26■□□□□ 0.99
COA3-201ENST00000328434 RSF1Q96T23 1441 aaPredicted RBP21.23■□□□□ 0.99
COA3-201ENST00000328434 KIF21AQ7Z4S6 1674 aa21.18■□□□□ 0.98
COA3-201ENST00000328434 MRC2Q9UBG0 1479 aa21.13■□□□□ 0.97
COA3-201ENST00000328434 CFTRP13569 1480 aa21.09■□□□□ 0.97
COA3-201ENST00000328434 TOP2AP11388 1531 aaKnown RBP21.09■□□□□ 0.97
COA3-201ENST00000328434 CEP164Q9UPV0 1460 aa21.07■□□□□ 0.96
COA3-201ENST00000328434 FANCD2Q9BXW9 1451 aa21.07■□□□□ 0.96
COA3-201ENST00000328434 WDR62O43379 1518 aa21.05■□□□□ 0.96
COA3-201ENST00000328434 CCDC88BA6NC98 1476 aa20.88■□□□□ 0.93
COA3-201ENST00000328434 URB2Q14146 1524 aaKnown RBP20.84■□□□□ 0.93
COA3-201ENST00000328434 OSCARQ8IYS5 282 aa20.76■□□□□ 0.91
COA3-201ENST00000328434 PRDM2Q13029 1718 aa20.7■□□□□ 0.9
COA3-201ENST00000328434 ABCC8Q09428 1581 aa20.7■□□□□ 0.9
COA3-201ENST00000328434 IFT140Q96RY7 1462 aa20.68■□□□□ 0.9
COA3-201ENST00000328434 TRIM41Q8WV44 630 aa20.66■□□□□ 0.9
COA3-201ENST00000328434 TOPBP1Q92547 1522 aa20.64■□□□□ 0.9
COA3-201ENST00000328434 ZNF608Q9ULD9 1512 aaPredicted RBP20.57■□□□□ 0.88
COA3-201ENST00000328434 DNMBPQ6XZF7 1577 aa20.56■□□□□ 0.88
COA3-201ENST00000328434 AQRO60306 1485 aaKnown RBP eCLIP20.44■□□□□ 0.86
COA3-201ENST00000328434 POLA1P09884 1462 aaPredicted RBP20.44■□□□□ 0.86
COA3-201ENST00000328434 EIF4G3O43432 1585 aaKnown RBP20.42■□□□□ 0.86
COA3-201ENST00000328434 SOGA1O94964 1423 aa20.42■□□□□ 0.86
COA3-201ENST00000328434 TARBP1Q13395 1621 aaKnown RBP20.42■□□□□ 0.86
COA3-201ENST00000328434 SUPT5HO00267 1087 aaKnown RBP20.39■□□□□ 0.85
COA3-201ENST00000328434 FBLN2P98095 1184 aa20.37■□□□□ 0.85
COA3-201ENST00000328434 RAD54L2Q9Y4B4 1467 aa20.36■□□□□ 0.85
COA3-201ENST00000328434 TDRD9Q8NDG6 1382 aaKnown RBP20.34■□□□□ 0.85
COA3-201ENST00000328434 FGD5Q6ZNL6 1462 aa20.31■□□□□ 0.84
COA3-201ENST00000328434 RIMBP3CA6NJZ7 1639 aa20.3■□□□□ 0.84
COA3-201ENST00000328434 RIMBP3BA6NNM3 1639 aa20.3■□□□□ 0.84
COA3-201ENST00000328434 RIMBP3Q9UFD9 1639 aa20.3■□□□□ 0.84
COA3-201ENST00000328434 CUX1P39880 1505 aa20.29■□□□□ 0.84
COA3-201ENST00000328434 ARHGEF11O15085 1522 aa20.28■□□□□ 0.84
COA3-201ENST00000328434 WDR97A6NE52 1622 aa20.27■□□□□ 0.84
COA3-201ENST00000328434 CHMP7Q8WUX9 453 aaPredicted RBP20.25■□□□□ 0.83
COA3-201ENST00000328434 CYB5RLQ6IPT4 315 aa20.24■□□□□ 0.83
COA3-201ENST00000328434 GRIN2BQ13224 1484 aa20.21■□□□□ 0.83
COA3-201ENST00000328434 SNAPC4Q5SXM2 1469 aa20.2■□□□□ 0.82
COA3-201ENST00000328434 MAGI1Q96QZ7 1491 aaPredicted RBP20.2■□□□□ 0.82
COA3-201ENST00000328434 CHD1O14646 1710 aa20.2■□□□□ 0.82
COA3-201ENST00000328434 GAPVD1Q14C86 1478 aa20.14■□□□□ 0.81
COA3-201ENST00000328434 SYNJ2O15056 1496 aa20.12■□□□□ 0.81
COA3-201ENST00000328434 ABCA10Q8WWZ4 1543 aa20.12■□□□□ 0.81
COA3-201ENST00000328434 WRNQ14191 1432 aaPredicted RBP eCLIP20.11■□□□□ 0.81
COA3-201ENST00000328434 SYNJ1O43426 1573 aa20.09■□□□□ 0.81
COA3-201ENST00000328434 ARAP1Q96P48 1450 aa20.07■□□□□ 0.8
COA3-201ENST00000328434 CLASP1Q7Z460 1538 aa20.06■□□□□ 0.8
COA3-201ENST00000328434 TRHP20396 242 aaPredicted RBP20.01■□□□□ 0.79
COA3-201ENST00000328434 ABCA5Q8WWZ7 1642 aa20.01■□□□□ 0.79
COA3-201ENST00000328434 TOP2BQ02880 1626 aa19.99■□□□□ 0.79
COA3-201ENST00000328434 PBRM1Q86U86 1689 aa19.98■□□□□ 0.79
COA3-201ENST00000328434 BIVM-ERCC5R4GMW8 1640 aa19.94■□□□□ 0.78
COA3-201ENST00000328434 GRIN2AQ12879 1464 aa19.92■□□□□ 0.78
COA3-201ENST00000328434 FHAD1B1AJZ9 1412 aa19.91■□□□□ 0.78
COA3-201ENST00000328434 ERICH3Q5RHP9 1530 aa19.87■□□□□ 0.77
COA3-201ENST00000328434 NUP160Q12769 1436 aa19.85■□□□□ 0.77
COA3-201ENST00000328434 ADAMTS12P58397 1594 aa19.85■□□□□ 0.77
COA3-201ENST00000328434 CEP170Q5SW79 1584 aa19.78■□□□□ 0.76
COA3-201ENST00000328434 JPH4Q96JJ6 628 aa19.74■□□□□ 0.75
COA3-201ENST00000328434 ERCC6L2Q5T890 1561 aa19.7■□□□□ 0.74
COA3-201ENST00000328434 SHROOM2Q13796 1616 aa19.7■□□□□ 0.74
COA3-201ENST00000328434 KIF27Q86VH2 1401 aa19.69■□□□□ 0.74
COA3-201ENST00000328434 PRG4Q92954 1404 aaPredicted RBP19.69■□□□□ 0.74
COA3-201ENST00000328434 IGF1RP08069 1367 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms