RNA–Protein interactions for RNA: ENST00000326306.4

CCR8-201, Transcript of C-C motif chemokine receptor 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCR8, Length 1,253 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR8-201ENST00000326306 AEBP2Q6ZN18 517 aaPredicted RBP19.62■□□□□ 0.73
CCR8-201ENST00000326306 CHIC1Q5VXU3 224 aa18.97■□□□□ 0.63
CCR8-201ENST00000326306 PHF23Q9BUL5 403 aaPredicted RBP16.71■□□□□ 0.27
CCR8-201ENST00000326306 SENP3Q9H4L4 574 aaPredicted RBP16.59■□□□□ 0.25
CCR8-201ENST00000326306 NISCHQ9Y2I1 1504 aa15.49■□□□□ 0.07
CCR8-201ENST00000326306 FOXD1Q16676 465 aa15.46■□□□□ 0.07
CCR8-201ENST00000326306 PLPPR3Q6T4P5 718 aa15.31■□□□□ 0.04
CCR8-201ENST00000326306 PPP6R1Q9UPN7 881 aa14.79□□□□□ -0.04
CCR8-201ENST00000326306 ADRA2BP18089 450 aa14.77□□□□□ -0.05
CCR8-201ENST00000326306 PIAS4Q8N2W9 510 aaPredicted RBP14.54□□□□□ -0.08
CCR8-201ENST00000326306 MSH5O43196 834 aa14.25□□□□□ -0.13
CCR8-201ENST00000326306 POTEDQ86YR6 584 aa13.92□□□□□ -0.18
CCR8-201ENST00000326306 CCDC180Q9P1Z9 1646 aa13.72□□□□□ -0.21
CCR8-201ENST00000326306 PPP4R3CPQ6ZMV5 832 aa13.5□□□□□ -0.25
CCR8-201ENST00000326306 MAPK8IP2Q13387 824 aaPredicted RBP13.45□□□□□ -0.26
CCR8-201ENST00000326306 SCAF1Q9H7N4 1312 aaKnown RBP13.4□□□□□ -0.26
CCR8-201ENST00000326306 DMRT2Q9Y5R5 561 aa13.24□□□□□ -0.29
CCR8-201ENST00000326306 ABCC9O60706 1549 aa13.18□□□□□ -0.3
CCR8-201ENST00000326306 CNKSR2Q8WXI2 1034 aa13.12□□□□□ -0.31
CCR8-201ENST00000326306 KCNA4P22459 653 aa13.07□□□□□ -0.32
CCR8-201ENST00000326306 NCBP3Q53F19 620 aaKnown RBP13.05□□□□□ -0.32
CCR8-201ENST00000326306 DCAF8L2P0C7V8 631 aa12.96□□□□□ -0.33
CCR8-201ENST00000326306 NPM3O75607 178 aaKnown RBP12.93□□□□□ -0.34
CCR8-201ENST00000326306 ZCCHC6Q5VYS8 1495 aaKnown RBP12.92□□□□□ -0.34
CCR8-201ENST00000326306 HOXD11P31277 338 aaPredicted RBP12.9□□□□□ -0.34
CCR8-201ENST00000326306 RNF216Q9NWF9 866 aaPredicted RBP12.9□□□□□ -0.34
CCR8-201ENST00000326306 NACADO15069 1562 aa12.86□□□□□ -0.35
CCR8-201ENST00000326306 DCAF1Q9Y4B6 1507 aa12.85□□□□□ -0.35
CCR8-201ENST00000326306 MYO15BQ96JP2 1530 aa12.83□□□□□ -0.35
CCR8-201ENST00000326306 RB1CC1Q8TDY2 1594 aa12.83□□□□□ -0.36
CCR8-201ENST00000326306 DCAF8L1A6NGE4 600 aa12.69□□□□□ -0.38
CCR8-201ENST00000326306 DNAJC5BQ9UF47 199 aa12.5□□□□□ -0.41
CCR8-201ENST00000326306 SCRIBQ14160 1630 aa12.49□□□□□ -0.41
CCR8-201ENST00000326306 UNC13AQ9UPW8 1703 aa12.48□□□□□ -0.41
CCR8-201ENST00000326306 SLC4A1APQ9BWU0 796 aaKnown RBP12.38□□□□□ -0.43
CCR8-201ENST00000326306 PABPN1Q86U42 306 aaKnown RBP eCLIP12.37□□□□□ -0.43
CCR8-201ENST00000326306 SHROOM4Q9ULL8 1493 aa12.34□□□□□ -0.43
CCR8-201ENST00000326306 BICRAQ9NZM4 1560 aa12.34□□□□□ -0.43
CCR8-201ENST00000326306 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.3□□□□□ -0.44
CCR8-201ENST00000326306 SLC4A2P04920 1241 aa12.26□□□□□ -0.45
CCR8-201ENST00000326306 RNF39Q9H2S5 420 aa12.24□□□□□ -0.45
CCR8-201ENST00000326306 U3KPZ7 1027 aaPredicted RBP12.13□□□□□ -0.47
CCR8-201ENST00000326306 ZBTB22O15209 634 aa12.06□□□□□ -0.48
CCR8-201ENST00000326306 C1QBPQ07021 282 aaKnown RBP12.04□□□□□ -0.48
CCR8-201ENST00000326306 EIF4G1Q04637 1599 aaKnown RBP12.04□□□□□ -0.48
CCR8-201ENST00000326306 FOXD4L1Q9NU39 408 aa12.03□□□□□ -0.48
CCR8-201ENST00000326306 BAZ1AQ9NRL2 1556 aaPredicted RBP12.03□□□□□ -0.48
CCR8-201ENST00000326306 CACNB1Q02641 598 aaPredicted RBP12□□□□□ -0.49
CCR8-201ENST00000326306 CECR2Q9BXF3 1484 aa12□□□□□ -0.49
CCR8-201ENST00000326306 SMARCA4P51532 1647 aa11.97□□□□□ -0.49
CCR8-201ENST00000326306 CC2D2AQ9P2K1 1620 aa11.94□□□□□ -0.5
CCR8-201ENST00000326306 EHMT2Q96KQ7 1210 aa11.92□□□□□ -0.5
CCR8-201ENST00000326306 MYCNP04198 464 aaPredicted RBP11.91□□□□□ -0.5
CCR8-201ENST00000326306 MROH2BQ7Z745 1585 aa11.91□□□□□ -0.5
CCR8-201ENST00000326306 SMARCA2P51531 1590 aa11.9□□□□□ -0.5
CCR8-201ENST00000326306 RSF1Q96T23 1441 aaPredicted RBP11.86□□□□□ -0.51
CCR8-201ENST00000326306 PEG3Q9GZU2 1588 aa11.85□□□□□ -0.51
CCR8-201ENST00000326306 ATAD2BQ9ULI0 1458 aa11.85□□□□□ -0.51
CCR8-201ENST00000326306 NCAPD3P42695 1498 aa11.84□□□□□ -0.51
CCR8-201ENST00000326306 SPINK5Q9NQ38 1064 aaPredicted RBP11.84□□□□□ -0.51
CCR8-201ENST00000326306 CSRNP3Q8WYN3 585 aa11.83□□□□□ -0.52
CCR8-201ENST00000326306 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.82□□□□□ -0.52
CCR8-201ENST00000326306 HNRNPUL2Q1KMD3 747 aaKnown RBP11.82□□□□□ -0.52
CCR8-201ENST00000326306 WIZO95785 1651 aa11.81□□□□□ -0.52
CCR8-201ENST00000326306 SAMD1Q6SPF0 538 aaPredicted RBP11.8□□□□□ -0.52
CCR8-201ENST00000326306 BAZ1BQ9UIG0 1483 aaKnown RBP11.8□□□□□ -0.52
CCR8-201ENST00000326306 SUPT5HO00267 1087 aaKnown RBP11.79□□□□□ -0.52
CCR8-201ENST00000326306 HMGXB3Q12766 1538 aa11.79□□□□□ -0.52
CCR8-201ENST00000326306 CAPN15O75808 1086 aa11.76□□□□□ -0.53
CCR8-201ENST00000326306 TOP2AP11388 1531 aaKnown RBP11.71□□□□□ -0.53
CCR8-201ENST00000326306 APLP2Q06481 763 aa11.71□□□□□ -0.53
CCR8-201ENST00000326306 TRHP20396 242 aaPredicted RBP11.68□□□□□ -0.54
CCR8-201ENST00000326306 ATF5Q9Y2D1 282 aaPredicted RBP11.68□□□□□ -0.54
CCR8-201ENST00000326306 ZNF219Q9P2Y4 722 aaPredicted RBP11.63□□□□□ -0.55
CCR8-201ENST00000326306 DSG3P32926 999 aa11.6□□□□□ -0.55
CCR8-201ENST00000326306 CCDC88BA6NC98 1476 aa11.57□□□□□ -0.56
CCR8-201ENST00000326306 ATXN8OSP0DMR3 200 aa11.57□□□□□ -0.56
CCR8-201ENST00000326306 ABCB7O75027 752 aa11.56□□□□□ -0.56
CCR8-201ENST00000326306 LAMC3Q9Y6N6 1575 aa11.52□□□□□ -0.57
CCR8-201ENST00000326306 CADPSQ9ULU8 1353 aa11.52□□□□□ -0.57
CCR8-201ENST00000326306 CFTRP13569 1480 aa11.47□□□□□ -0.57
CCR8-201ENST00000326306 PDS5BQ9NTI5 1447 aa11.46□□□□□ -0.57
CCR8-201ENST00000326306 POLA2Q14181 598 aa11.45□□□□□ -0.58
CCR8-201ENST00000326306 PRDM2Q13029 1718 aa11.43□□□□□ -0.58
CCR8-201ENST00000326306 NESP48681 1621 aa11.43□□□□□ -0.58
CCR8-201ENST00000326306 ERCC6Q03468 1493 aa11.41□□□□□ -0.58
CCR8-201ENST00000326306 DNAJC5Q9H3Z4 198 aa11.4□□□□□ -0.58
CCR8-201ENST00000326306 FANCD2Q9BXW9 1451 aa11.37□□□□□ -0.59
CCR8-201ENST00000326306 CEP164Q9UPV0 1460 aa11.35□□□□□ -0.59
CCR8-201ENST00000326306 KIF21AQ7Z4S6 1674 aa11.34□□□□□ -0.59
CCR8-201ENST00000326306 ABCC8Q09428 1581 aa11.3□□□□□ -0.6
CCR8-201ENST00000326306 MRC2Q9UBG0 1479 aa11.28□□□□□ -0.6
CCR8-201ENST00000326306 WRNQ14191 1432 aaPredicted RBP eCLIP11.22□□□□□ -0.61
CCR8-201ENST00000326306 DNMBPQ6XZF7 1577 aa11.22□□□□□ -0.61
CCR8-201ENST00000326306 THOC2Q8NI27 1593 aaKnown RBP11.22□□□□□ -0.61
CCR8-201ENST00000326306 WDR62O43379 1518 aa11.21□□□□□ -0.61
CCR8-201ENST00000326306 URB2Q14146 1524 aaKnown RBP11.19□□□□□ -0.62
CCR8-201ENST00000326306 TOPBP1Q92547 1522 aa11.19□□□□□ -0.62
CCR8-201ENST00000326306 CUX2O14529 1486 aa11.19□□□□□ -0.62
CCR8-201ENST00000326306 ZBTB12Q9Y330 459 aaPredicted RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms