RNA–Protein interactions for RNA: ENST00000326233.6

LCE1D-201, Transcript of late cornified envelope 1D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LCE1D, Length 430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCE1D-201ENST00000326233 NISCHQ9Y2I1 1504 aa42.48■■■■■ 4.39
LCE1D-201ENST00000326233 CCDC180Q9P1Z9 1646 aa37.54■■■■□ 3.6
LCE1D-201ENST00000326233 ABCC9O60706 1549 aa36.29■■■■□ 3.4
LCE1D-201ENST00000326233 ZCCHC6Q5VYS8 1495 aaKnown RBP35.48■■■■□ 3.27
LCE1D-201ENST00000326233 DCAF8L2P0C7V8 631 aa35.34■■■■□ 3.25
LCE1D-201ENST00000326233 NACADO15069 1562 aa35.2■■■■□ 3.23
LCE1D-201ENST00000326233 DCAF1Q9Y4B6 1507 aa35.17■■■■□ 3.22
LCE1D-201ENST00000326233 MYO15BQ96JP2 1530 aa35.14■■■■□ 3.22
LCE1D-201ENST00000326233 RB1CC1Q8TDY2 1594 aa35.12■■■■□ 3.21
LCE1D-201ENST00000326233 SCRIBQ14160 1630 aa34.3■■■■□ 3.08
LCE1D-201ENST00000326233 UNC13AQ9UPW8 1703 aa34.3■■■■□ 3.08
LCE1D-201ENST00000326233 BICRAQ9NZM4 1560 aa34.03■■■■□ 3.04
LCE1D-201ENST00000326233 PABPN1Q86U42 306 aaKnown RBP eCLIP34.02■■■■□ 3.04
LCE1D-201ENST00000326233 SHROOM4Q9ULL8 1493 aa33.87■■■■□ 3.01
LCE1D-201ENST00000326233 EIF4G1Q04637 1599 aaKnown RBP33.09■■■□□ 2.89
LCE1D-201ENST00000326233 CECR2Q9BXF3 1484 aa33.05■■■□□ 2.88
LCE1D-201ENST00000326233 BAZ1AQ9NRL2 1556 aaPredicted RBP32.89■■■□□ 2.86
LCE1D-201ENST00000326233 DNAJC5BQ9UF47 199 aa32.89■■■□□ 2.86
LCE1D-201ENST00000326233 SMARCA4P51532 1647 aa32.85■■■□□ 2.85
LCE1D-201ENST00000326233 CC2D2AQ9P2K1 1620 aa32.84■■■□□ 2.85
LCE1D-201ENST00000326233 MROH2BQ7Z745 1585 aa32.75■■■□□ 2.83
LCE1D-201ENST00000326233 ATAD2BQ9ULI0 1458 aa32.57■■■□□ 2.8
LCE1D-201ENST00000326233 RSF1Q96T23 1441 aaPredicted RBP32.56■■■□□ 2.8
LCE1D-201ENST00000326233 SMARCA2P51531 1590 aa32.55■■■□□ 2.8
LCE1D-201ENST00000326233 PEG3Q9GZU2 1588 aa32.52■■■□□ 2.8
LCE1D-201ENST00000326233 NCAPD3P42695 1498 aa32.48■■■□□ 2.79
LCE1D-201ENST00000326233 WIZO95785 1651 aa32.42■■■□□ 2.78
LCE1D-201ENST00000326233 HMGXB3Q12766 1538 aa32.35■■■□□ 2.77
LCE1D-201ENST00000326233 BAZ1BQ9UIG0 1483 aaKnown RBP32.32■■■□□ 2.76
LCE1D-201ENST00000326233 SUPT5HO00267 1087 aaKnown RBP32.13■■■□□ 2.73
LCE1D-201ENST00000326233 TOP2AP11388 1531 aaKnown RBP32.1■■■□□ 2.73
LCE1D-201ENST00000326233 CCDC88BA6NC98 1476 aa31.74■■■□□ 2.67
LCE1D-201ENST00000326233 CADPSQ9ULU8 1353 aa31.56■■■□□ 2.64
LCE1D-201ENST00000326233 NESP48681 1621 aa31.55■■■□□ 2.64
LCE1D-201ENST00000326233 LAMC3Q9Y6N6 1575 aa31.53■■■□□ 2.64
LCE1D-201ENST00000326233 CFTRP13569 1480 aa31.47■■■□□ 2.63
LCE1D-201ENST00000326233 PDS5BQ9NTI5 1447 aa31.32■■■□□ 2.61
LCE1D-201ENST00000326233 ERCC6Q03468 1493 aa31.25■■■□□ 2.59
LCE1D-201ENST00000326233 PRDM2Q13029 1718 aa31.24■■■□□ 2.59
LCE1D-201ENST00000326233 FANCD2Q9BXW9 1451 aa31.2■■■□□ 2.58
LCE1D-201ENST00000326233 KIF21AQ7Z4S6 1674 aa31.17■■■□□ 2.58
LCE1D-201ENST00000326233 CEP164Q9UPV0 1460 aa31.11■■■□□ 2.57
LCE1D-201ENST00000326233 MRC2Q9UBG0 1479 aa30.96■■■□□ 2.55
LCE1D-201ENST00000326233 THOC2Q8NI27 1593 aaKnown RBP30.95■■■□□ 2.54
LCE1D-201ENST00000326233 URB2Q14146 1524 aaKnown RBP30.84■■■□□ 2.53
LCE1D-201ENST00000326233 WDR62O43379 1518 aa30.83■■■□□ 2.53
LCE1D-201ENST00000326233 ABCC8Q09428 1581 aa30.78■■■□□ 2.52
LCE1D-201ENST00000326233 TOPBP1Q92547 1522 aa30.75■■■□□ 2.51
LCE1D-201ENST00000326233 DNMBPQ6XZF7 1577 aa30.75■■■□□ 2.51
LCE1D-201ENST00000326233 CUX2O14529 1486 aa30.74■■■□□ 2.51
LCE1D-201ENST00000326233 CUX1P39880 1505 aa30.69■■■□□ 2.5
LCE1D-201ENST00000326233 WRNQ14191 1432 aaPredicted RBP eCLIP30.68■■■□□ 2.5
LCE1D-201ENST00000326233 SYNJ1O43426 1573 aa30.57■■■□□ 2.48
LCE1D-201ENST00000326233 TOP2BQ02880 1626 aa30.55■■■□□ 2.48
LCE1D-201ENST00000326233 BIVM-ERCC5R4GMW8 1640 aa30.55■■■□□ 2.48
LCE1D-201ENST00000326233 POLA1P09884 1462 aaPredicted RBP30.52■■■□□ 2.48
LCE1D-201ENST00000326233 FGD5Q6ZNL6 1462 aa30.51■■■□□ 2.48
LCE1D-201ENST00000326233 IFT140Q96RY7 1462 aa30.44■■■□□ 2.46
LCE1D-201ENST00000326233 SOGA1O94964 1423 aa30.42■■■□□ 2.46
LCE1D-201ENST00000326233 RAD54L2Q9Y4B4 1467 aa30.39■■■□□ 2.46
LCE1D-201ENST00000326233 TARBP1Q13395 1621 aaKnown RBP30.36■■■□□ 2.45
LCE1D-201ENST00000326233 TRIM41Q8WV44 630 aa30.32■■■□□ 2.44
LCE1D-201ENST00000326233 CHIC1Q5VXU3 224 aa30.26■■■□□ 2.43
LCE1D-201ENST00000326233 ZNF608Q9ULD9 1512 aaPredicted RBP30.26■■■□□ 2.43
LCE1D-201ENST00000326233 ABCA10Q8WWZ4 1543 aa30.25■■■□□ 2.43
LCE1D-201ENST00000326233 WDR97A6NE52 1622 aa30.22■■■□□ 2.43
LCE1D-201ENST00000326233 TDRD9Q8NDG6 1382 aaKnown RBP30.18■■■□□ 2.42
LCE1D-201ENST00000326233 AQRO60306 1485 aaKnown RBP eCLIP30.16■■■□□ 2.42
LCE1D-201ENST00000326233 EIF4G3O43432 1585 aaKnown RBP30.15■■■□□ 2.42
LCE1D-201ENST00000326233 ABCA5Q8WWZ7 1642 aa30.07■■■□□ 2.4
LCE1D-201ENST00000326233 GAPVD1Q14C86 1478 aa30.06■■■□□ 2.4
LCE1D-201ENST00000326233 KIF27Q86VH2 1401 aa30.01■■■□□ 2.39
LCE1D-201ENST00000326233 GRIN2BQ13224 1484 aa30■■■□□ 2.39
LCE1D-201ENST00000326233 PBRM1Q86U86 1689 aa29.95■■■□□ 2.39
LCE1D-201ENST00000326233 ERICH3Q5RHP9 1530 aa29.89■■■□□ 2.38
LCE1D-201ENST00000326233 RUSC2Q8N2Y8 1516 aa29.89■■■□□ 2.38
LCE1D-201ENST00000326233 SNAPC4Q5SXM2 1469 aa29.88■■■□□ 2.37
LCE1D-201ENST00000326233 MAGI1Q96QZ7 1491 aaPredicted RBP29.87■■■□□ 2.37
LCE1D-201ENST00000326233 IGF1RP08069 1367 aa29.84■■■□□ 2.37
LCE1D-201ENST00000326233 EEA1Q15075 1411 aa29.77■■■□□ 2.36
LCE1D-201ENST00000326233 ADAMTS12P58397 1594 aa29.75■■■□□ 2.35
LCE1D-201ENST00000326233 SYNJ2O15056 1496 aa29.74■■■□□ 2.35
LCE1D-201ENST00000326233 FHAD1B1AJZ9 1412 aa29.74■■■□□ 2.35
LCE1D-201ENST00000326233 FBLN2P98095 1184 aa29.72■■■□□ 2.35
LCE1D-201ENST00000326233 CHMP7Q8WUX9 453 aaPredicted RBP29.72■■■□□ 2.35
LCE1D-201ENST00000326233 CUL7Q14999 1698 aa29.71■■■□□ 2.35
LCE1D-201ENST00000326233 FAM9AQ8IZU1 332 aaPredicted RBP29.68■■■□□ 2.34
LCE1D-201ENST00000326233 CARMIL1Q5VZK9 1371 aa29.67■■■□□ 2.34
LCE1D-201ENST00000326233 CSRNP3Q8WYN3 585 aa29.67■■■□□ 2.34
LCE1D-201ENST00000326233 CHD1O14646 1710 aa29.67■■■□□ 2.34
LCE1D-201ENST00000326233 GRIN2AQ12879 1464 aa29.61■■■□□ 2.33
LCE1D-201ENST00000326233 OSCARQ8IYS5 282 aa29.58■■■□□ 2.33
LCE1D-201ENST00000326233 PRXQ9BXM0 1461 aa29.55■■■□□ 2.32
LCE1D-201ENST00000326233 RAPGEF2Q9Y4G8 1499 aa29.55■■■□□ 2.32
LCE1D-201ENST00000326233 NUP160Q12769 1436 aa29.45■■■□□ 2.31
LCE1D-201ENST00000326233 CEP170Q5SW79 1584 aa29.43■■■□□ 2.3
LCE1D-201ENST00000326233 KIF21BO75037 1637 aa29.39■■■□□ 2.3
LCE1D-201ENST00000326233 CLASP1Q7Z460 1538 aa29.36■■■□□ 2.29
LCE1D-201ENST00000326233 KIAA0586Q9BVV6 1533 aa29.3■■■□□ 2.28
LCE1D-201ENST00000326233 GOLGA3Q08378 1498 aa29.28■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms